SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.07g019700

Feature Type:gene_model
Chromosome:Gm07
Start:1555301
stop:1557811
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.07g019700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G52230.1AT PSAH-2,PSAH2,PSI-H JGI N/AIEA
GO:0015979GO-bp photosynthesis JGI N/AIEA
GO:0009522GO-cc photosystem I JGI N/AIEA
GO:0009538GO-cc photosystem I reaction center JGI N/AIEA
K02695KEGG Photosynthesis proteins JGI N/AIEA
PTHR34787PantherFam PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC JGI N/AIEA
PTHR34787:SF1PantherFam PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC JGI N/AIEA
PF03244Pfam Photosystem I reaction centre subunit VI JGI N/AIEA

Gene model name correspondences to Glyma.07g019700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g02240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g019700
>Glyma.07g019700.1 sequence-type=CDS polypeptide=Glyma.07g019700.1.p locus=Glyma.07g019700 id=Glyma.07g019700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTCTAGCAACCTTGGCTGCTGTTCAACCAGCTACGATCAATGGCCTTGCTGGAAGTTCCCTCTCTGGAACTAAGCTCTCTTTCAAGCCCTCTCGCCACAGTGTCAAATCCAAGAACTTCAGTGTAACTAAGCATTACAGGAGTGGTGCCGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATCTGGGCAACACTACAGGGCAGTGGGACTTGTATGGCTCAGATGCACCTTCACCCTACAACCCTCTTCAGAGCAAGTTCTTCGAGACATTTGCTGCTCCATTCACAAAGAGGGGATTGTTACTCAAGTTTCTGATATTGGGAGGTGGTTCCACCCTTGCATACTTCAGTGCAACTGCCTCAGGTGACATTCTACCAATCAAGAAGGGACCACAACTCCCACCAAAGCTCGGTCCTCGTGGCAAGATCTAA

>Glyma.07g019700.2 sequence-type=CDS polypeptide=Glyma.07g019700.2.p locus=Glyma.07g019700 id=Glyma.07g019700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTCTAGCAACCTTGGCTGCTGTTCAACCAGCTACGATCAATGGCCTTGCTGGAAGTTCCCTCTCTGGAACTAAGCTCTCTTTCAAGCCCTCTCGCCACAGTGTCAAATCCAAGAACTTCAGGAGTGGTGCCGTGGTAGCAAAGTATGGTGACAAGAGTGTGTACTTTGATTTGGAGGATCTGGGCAACACTACAGGGCAGTGGGACTTGTATGGCTCAGATGCACCTTCACCCTACAACCCTCTTCAGAGCAAGTTCTTCGAGACATTTGCTGCTCCATTCACAAAGAGGGGATTGTTACTCAAGTTTCTGATATTGGGAGGTGGTTCCACCCTTGCATACTTCAGTGCAACTGCCTCAGGTGACATTCTACCAATCAAGAAGGGACCACAACTCCCACCAAAGCTCGGTCCTCGTGGCAAGATCTAA
Predicted protein sequences of Glyma.07g019700
>Glyma.07g019700.1.p sequence-type=predicted peptide transcript=Glyma.07g019700.1 locus=Glyma.07g019700 id=Glyma.07g019700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFSVTKHYRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI*

>Glyma.07g019700.2.p sequence-type=predicted peptide transcript=Glyma.07g019700.2 locus=Glyma.07g019700 id=Glyma.07g019700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASLATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSTLAYFSATASGDILPIKKGPQLPPKLGPRGKI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo