Report for Sequence Feature Glyma.07g010300
Feature Type: gene_model
Chromosome: Gm07
Start: 775357
stop: 779216
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.07g010300
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G13772.1 AT
transmembrane nine 7
JGI N/A IEA
GO:0016020 GO-cc
membrane
EnsemblGenomes N/A IEA
GO:0016021 GO-cc
integral component of membrane
EnsemblGenomes N/A IEA
GO:0016021 GO-cc
integral component of membrane
JGI N/A IEA
KOG1278
KOG
Endosomal membrane proteins, EMP70
JGI N/A IEA
PTHR10766 Panther
TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
JGI N/A IEA
PF02990 PFAM
Endomembrane protein 70
JGI N/A IEA
Expression Patterns of Glyma.07g010300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.07g010300
Paralog Evidence Comments
Glyma.08g193400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.07g010300 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma07g01240 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.07g010300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.07g010300.1 sequence-type=CDS polypeptide=Glyma.07g010300.1.p locus=Glyma.07g010300 ID=Glyma.07g010300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGAAGAAGATGATGGCAAGCACCGCCATCTCCGTCGTCTTCGCCGCGCTCTTCCTCTTCTCCTCCGTCCACTCCTTCTACCTCCCCGGCGTCGCTCCTCGCGATTTTCAAATTGGTGACCCCCTCTCTGTCAAAGTGAACAAGTTATCATCCACCAAGACTCAACTTCCATATGACTACTACTTCTTGAAGTATTGCAAACCCAAAAAGATATTGAACAACGCCGAAAATTTGGGAGAGGTTCTTAGAGGTGATCGCATTGAGAATTCAGTATATACATTTCATATGAGGAAGGAACAGTCTTGTACTGTTGTTTGTCATGAAATTTTGGATGCTGAATCTGCAAAGAGTTTTAAAGAAAAAATTGATGATGAATATCGAGTGAACATGATTTTGGATAACCTTCCAGTTGCTGTTCATAGACAAAGGAGGGATGGAAGTCAATCAACAACATATGAACATGGTTTTCGTGTTGGGTTCAAAGGAAACTATCAAGGGAGCAAGGAGGAGAAATATTTTATTAATAACCACTTGAGTTTCAGAGTCATGTATCACAAGGATCCTGAAACTGGTTCTGCTCGTATTGTTGGATTTGAGGTCACCCCAAACAGTATAAATCACGAATACAAGGAGTGGAATGACAAGAATCCACAGGTAACAACATGCAATAAAGATACCAAGAATTTGATGCAAGGTAGTACTGTCCCACAAGAAGTAGATACAAACAAGGATATCGTATTCACATATGATGTTTCCTTCAAGGAAAGTGATATCAAATGGGCATCACGGTGGGACACATATCTTTTAATGAATGATGATCAGATCCACTGGTTCTCCATCATTAACTCTTTGATGATTGTTCTTTTCCTGTCTGGAATGGTGGCAATGATCATGATGAGAACTCTTTACAGAGACATTGCCAATTATAATCAGCTAGAAACCCAAGATGAGGCCCAAGAAGAAACAGGGTGGAAACTTGTTCATGGAGATATTTTCAGGCCACCAGTCAATTCAAATTTGCTTTGTGTTTATGTCGGTACTGGTGTTCAGATCTTTGCAATGACACTTGTGACAATGATATTTGCTTTGCTAGGGTTTTTGTCTCCATCTAATCGTGGAGGTCTCATGACTGCTATGGTTCTGTTGTGGGTTTTTATGGGCTTATTTGCTGGCTACTCCTCAGCACGTTTGTACAAGATGTTCAAGGGCACAGAATGGAAAAGGAACACCTTGAAAACTGCATTTATGTTCCCAGGCATTCTTTTTGCTGTCTTCTTTGTGCTGAATGCTTTAATCTGGGGGGAGCAGTCCTCCGGGGCAGTCCCTTTTGGAACAATGTTTGCTCTAGTCTGCTTATGGTTTGGTATATCAGTACCCTTGGTCTTTGTTGGCAGTTACTTGGGTTTTAAAAAGCCAGCAATTGAAGACCCAGTGAAGACTAATAAAATTCCTAGGCAGGTACCTGAGCAGGCGTGGTATATGAAACCTGTCTTCTCAATTCTTATTGGAGGCATTCTTCCATTTGGGGCAGTGTTCATCGAGCTCTTCTTTATCCTGACATCAATATGGCTGAACCAGTTCTATTACATCTTTGGCTTCCTTTTCATAGTGTTTGTGATCCTATTAATCACCTGTGCCGAGATTACCATTGTGCTTTGCTACTTCCAATTGTGCAGTGAGGATTACAATTGGTGGTGGAGATCTTATCTCACTGCTGGGTCCTCTGCGTTGTACCTCTTCCTCTACTCAATTTTCTACTTCTTTACCAAGTTGGAGATTTCAAAGCTGGTATCGGGCATCCTTTACTTCGGGTACATGATAATTGTTTCATATGCCTTCTTTGTGTTGACGGGAACTATTGGCTTCTATGCTTGCTTCTGGTTTGTTCGCAAGATCTACTCGTCGGTGAAGATTGACTGA
Predicted protein sequences of Glyma.07g010300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.07g010300.1.p sequence-type=predicted peptide transcript=Glyma.07g010300.1 locus=Glyma.07g010300 ID=Glyma.07g010300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKKKMMASTAISVVFAALFLFSSVHSFYLPGVAPRDFQIGDPLSVKVNKLSSTKTQLPYDYYFLKYCKPKKILNNAENLGEVLRGDRIENSVYTFHMRKEQSCTVVCHEILDAESAKSFKEKIDDEYRVNMILDNLPVAVHRQRRDGSQSTTYEHGFRVGFKGNYQGSKEEKYFINNHLSFRVMYHKDPETGSARIVGFEVTPNSINHEYKEWNDKNPQVTTCNKDTKNLMQGSTVPQEVDTNKDIVFTYDVSFKESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLETQDEAQEETGWKLVHGDIFRPPVNSNLLCVYVGTGVQIFAMTLVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSARLYKMFKGTEWKRNTLKTAFMFPGILFAVFFVLNALIWGEQSSGAVPFGTMFALVCLWFGISVPLVFVGSYLGFKKPAIEDPVKTNKIPRQVPEQAWYMKPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITIVLCYFQLCSEDYNWWWRSYLTAGSSALYLFLYSIFYFFTKLEISKLVSGILYFGYMIIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID*