SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.07g002000

Feature Type:gene_model
Chromosome:Gm07
Start:180778
stop:185178
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.07g002000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G20260.1AT JGI N/AIEA
GO:0006412GO-bp translation JGI N/AIEA
GO:0005622GO-cc intracellular anatomical structure JGI N/AIEA
GO:0005840GO-cc ribosome JGI N/AIEA
GO:0003735GO-mf structural constituent of ribosome JGI N/AIEA
PTHR10759PantherFam 60S RIBOSOMAL PROTEIN L34 JGI N/AIEA
PTHR10759:SF4PantherFam RIBOSOMAL PROTEIN L34, PUTATIVE-RELATED JGI N/AIEA
PF07891Pfam Protein of unknown function (DUF1666) JGI N/AIEA

Gene model name correspondences to Glyma.07g002000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma07g00400 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.07g002000
>Glyma.07g002000.2 sequence-type=CDS polypeptide=Glyma.07g002000.2.p locus=Glyma.07g002000 id=Glyma.07g002000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTTTTTGAAAATCAAGAAGTTCAGAAAATCTCAGAAAGCAGATGGAGAAAAGGATTTGGCAGACAAGGCAGTGCCTGAGCCTGAGGAACCAAAGCTGAACACCGACTGTCCTGATCAGTGTAAATCAGAAAACGCAGATTCTGCAGGTGAAGCTGAGGATGATGATGATTTTATTACTAATGAGGTTAAGAGGAGGCTGAAAGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCCTGCCCGGAGGAAGGGGAGGAGGAAGAGGAAGAGGGAGAGACGAGCTCAAATGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGTGGTTTTGATGCTGTGTTTGAAAAGTACTGTGAAAGAATGTTATTCTTTGATCGGATGGGCACTCAACAGCTTAGTGAAGTTGGCAAAGGTTCACAGTATACTTCAACTCCATCTCCAAGATCTGCTTCAAAGAAGCTGGTTTCTCCCCTTCGTTGTCTTTCCTTGAAAAAATTTGAAGAACCTGATGATGAGACTGAACATCTTCAACAGCCTGAGCATGACCCCTACCTGGATATTGAAACAGCATATGTAGGTCAAATTTGCTTGACTTGGGAGGCACTTCATTGTCAGTACTCTCATATGAGTCAGAAGATATCTTGGCAACATGATAATCCTACCTGTTACAACCACAGTGCACAAGAGTTTCAACAGTTCCAGGTTCTATTACAAAGGTTTATTGAAAATGAACCTTTTGAGCAGGGCCGTCGAGCTGAAATTTATGCTCGCACAAGGAACAATTTGCCTAAACTGCTTCAGATTCCTAATATACGAGGTTCAGATCATGAATTGACTGATGATTCAGAGACGAGAGTTCTTGCTCCTGATCTTATCAGGATAATTGAAAGTTCTATCCTTACATTCCACCTTTTCATGAAAAGGGACAAGAAAAAGTCAAGTGGTGCCACCAGTCAGAACCAGCTTGCAACTCCTCTACAACAGATTCAGTCGACTCTTGAAAAGAAAGTGGCGAAGCTGAAGGAACTGCGCAGAAAGAAAAAAAGTTGGAAGAAGAATTCTTGGCCCCAAAAGCATGAGGACATTCATCTTTTGCTTGGCCTTATTGACGTGAAAATCCTGGCAAGGGTTCTGAGGATGACGAGGATGACTAGAGAGCAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTGGATTTATCAAATAGTAGGTTAGAAAGGGATCCATGTCCCATCCTCTTCCCTTGCTAG

>Glyma.07g002000.3 sequence-type=CDS polypeptide=Glyma.07g002000.3.p locus=Glyma.07g002000 id=Glyma.07g002000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGTGGTTTTGATGCTGTGTTTGAAAAGTACTGTGAAAGAATGTTATTCTTTGATCGGATGGGCACTCAACAGCTTAGTGAAGTTGGCAAAGTATACTTCAACTCCATCTCCAAGATCTGCTTCAAAGAAGCTGGTTTCTCCCCTTCGTTGTCTTTCCTTGAAAAAATTTGAAGAACCTGATGATGAGACTGAACATCTTCAACAGCCTGAGCATGACCCCTACCTGGATATTGAAACAGCATATGTAGGTCAAATTTGCTTGACTTGGGAGGCACTTCATTGTCAGTACTCTCATATGAGTCAGAAGATATCTTGGCAACATGATAATCCTACCTGTTACAACCACAGTGCACAAGAGTTTCAACAGTTCCAGGTTCTATTACAAAGGTTTATTGAAAATGAACCTTTTGAGCAGGGCCGTCGAGCTGAAATTTATGCTCGCACAAGGAACAATTTGCCTAAACTGCTTCAGATTCCTAATATACGAGGTTCAGATCATGAATTGACTGATGATTCAGAGACGAGAGTTCTTGCTCCTGATCTTATCAGGATAATTGAAAGTTCTATCCTTACATTCCACCTTTTCATGAAAAGGGACAAGAAAAAGTCAAGTGGTGCCACCAGTCAGAACCAGCTTGCAACTCCTCTACAACAGATTCAGTCGACTCTTGAAAAGAAAGTGGCGAAGCTGAAGGAACTGCGCAGAAAGAAAAAAAGTTGGAAGAAGAATTCTTGGCCCCAAAAGCATGAGGACATTCATCTTTTGCTTGGCCTTATTGACGTGAAAATCCTGGCAAGGGTTCTGAGGATGACGAGGATGACTAGAGAGCAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTGGATTTATCAAATAGTAGGTTAGAAAGGGATCCATGTCCCATCCTCTTCCCTTGCTAG
Predicted protein sequences of Glyma.07g002000
>Glyma.07g002000.2.p sequence-type=predicted peptide transcript=Glyma.07g002000.2 locus=Glyma.07g002000 id=Glyma.07g002000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEFLKIKKFRKSQKADGEKDLADKAVPEPEEPKLNTDCPDQCKSENADSAGEAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEEGEEEEEEGETSSNEWRDVEAEGQQWWRGFDAVFEKYCERMLFFDRMGTQQLSEVGKGSQYTSTPSPRSASKKLVSPLRCLSLKKFEEPDDETEHLQQPEHDPYLDIETAYVGQICLTWEALHCQYSHMSQKISWQHDNPTCYNHSAQEFQQFQVLLQRFIENEPFEQGRRAEIYARTRNNLPKLLQIPNIRGSDHELTDDSETRVLAPDLIRIIESSILTFHLFMKRDKKKSSGATSQNQLATPLQQIQSTLEKKVAKLKELRRKKKSWKKNSWPQKHEDIHLLLGLIDVKILARVLRMTRMTREQLFWCEEKMKKLDLSNSRLERDPCPILFPC*

>Glyma.07g002000.3.p sequence-type=predicted peptide transcript=Glyma.07g002000.3 locus=Glyma.07g002000 id=Glyma.07g002000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNGGMWRQKVSNGGVVLMLCLKSTVKECYSLIGWALNSLVKLAKYTSTPSPRSASKKLVSPLRCLSLKKFEEPDDETEHLQQPEHDPYLDIETAYVGQICLTWEALHCQYSHMSQKISWQHDNPTCYNHSAQEFQQFQVLLQRFIENEPFEQGRRAEIYARTRNNLPKLLQIPNIRGSDHELTDDSETRVLAPDLIRIIESSILTFHLFMKRDKKKSSGATSQNQLATPLQQIQSTLEKKVAKLKELRRKKKSWKKNSWPQKHEDIHLLLGLIDVKILARVLRMTRMTREQLFWCEEKMKKLDLSNSRLERDPCPILFPC*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo