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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G21990.1 | AT | APS reductase 3 | JGI | N/A | IEA |
| GO:0008152 | GO-bp | metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0008152 | GO-bp | metabolic process | JGI | N/A | IEA |
| GO:0019419 | GO-bp | sulfate reduction | EnsemblGenomes | N/A | IEA |
| GO:0045454 | GO-bp | cell redox homeostasis | EnsemblGenomes | N/A | IEA |
| GO:0045454 | GO-bp | cell redox homeostasis | JGI | N/A | IEA |
| GO:0055114 | GO-bp | oxidation-reduction process | EnsemblGenomes | N/A | IEA |
| GO:0005737 | GO-cc | cytoplasm | EnsemblGenomes | N/A | IEA |
| GO:0003824 | GO-mf | catalytic activity | EnsemblGenomes | N/A | IEA |
| GO:0003824 | GO-mf | catalytic activity | JGI | N/A | IEA |
| GO:0004604 | GO-mf | phosphoadenylyl-sulfate reductase (thioredoxin) activity | EnsemblGenomes | N/A | IEA |
| GO:0016671 | GO-mf | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | EnsemblGenomes | N/A | IEA |
| KOG0189 | KOG | Phosphoadenosine phosphosulfate reductase | JGI | N/A | IEA |
| PTHR18929 | Panther | PROTEIN DISULFIDE ISOMERASE | JGI | N/A | IEA |
| PF00085 | PFAM | Thioredoxin | JGI | N/A | IEA |
| PF01507 | PFAM | Phosphoadenosine phosphosulfate reductase family | JGI | N/A | IEA |
| GN7V-57103 | SoyCyc9-rxn | adenylyl-sulfate reductase (thioredoxin) | Plant Metabolic Network | ISS |
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Glyma.07G261500 not represented in the dataset |
Glyma.07G261500 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.07g261500 | Wm82.a4.v1 | ISS | As supplied by JGI |
| Glyma07g39130 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.07g261500.1 sequence-type=CDS polypeptide=Glyma.07g261500.1.p locus=Glyma.07g261500 ID=Glyma.07g261500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCCCTCGCTTTCACTTCTTCAATTTCCGCACCAACTTCCACCTTCCCATCATCGGAACCCAAACTTCCGCAAATTGGGTCAATTAGGATTTCGGAGAGGCCCATTGGAGGCGCCGTTAATTTCAATTTATCTCAAAGACGGAGCTTGGTAAAGCCCGTTAACGCCGAACCTCCACGCAAGGATTCCATTGTTCCTCTCGCAGCAACAACCATCGTTGCTTCTGCTTCTGAGACGAAAGAGGAAGATTTTGAACAGATAGCCAGTGATCTCGACAATGCTTCACCTCTTGAAATCATGGATAGAGCCCTCGACAAATTCGGCAACGACATAGCTATTGCCTTCAGTGGTGCTGAAGATGTTGCTTTGATTGAGTATGCGAAATTGACGGGTCGACCCTTTAGGGTTTTCAGTTTGGACACTGGGAGACTGAACCCAGAAACTTATCAACTTTTTGATGCGGTTGAGAAGCATTATGGAATTCGCATTGAGTACATGTTCCCTGATGCTGTTGAGGTTCAGGCATTGGTGAGGAGTAAGGGGTTATTCTCTTTCTACGAGGATGGGCACCAAGAGTGTTGCAGGGTGAGAAAGGTGAGGCCTTTAAGGAGGGCCCTTAAGGGTCTCAGAGCATGGATAACTGGTCAGAGGAAAGACCAGTCACCTGGTACTAGGTCTGAAATACCGGTTGTTCAGGTTGATCCGGTTTTTGAGGGAATGGATGGTGGAATTGGAAGCTTGGTGAAGTGGAACCCTGTTGCAAATGTGAAGGGCCATGACATATGGAACTTCCTTAGGACCATGAATGTGCCTGTGAATTCCTTGCATGCAAAAGGATATGTTTCCATTGGGTGTGAGCCCTGCACTAGGCCTGTTTTACCTGGGCAACATGAAAGGGAAGGGAGGTGGTGGTGGGAGGATGCCAAAGCTAAGGAATGTGGTCTTCACAAAGGAAATGTAAAGCAGCAGAAAGAGGAGGATGTTAATGGAAATGGGCTATCCCAATCCCATGCAAATGGTGATGCTACCACTGTGCCTGACATTTTCAACAGCCCGAATGTAGTTAACTTGAGCAGGACTGGAATTGAGAATTTGGCAAAATTGGAGGACCGAAAGGAACCATGGCTTGTTGTGCTTTATGCACCATGGTGCCCCTACTGCCAGGCTATGGAGGAATCTTATGTTGACTTAGCAGACAAGTTAGCAGGGTCAACAGGGATGAAGGTTGGAAAATTTAGAGCAGATGGAGAACAGAAAGAATTTGCAAAGAGTGAACTGCAATTGGGAAGCTTCCCTACGATATTATTTTTCCCAAAGCATTCGTCTCGGCCAACAATAAAGTATCCCTCAGAAAAGAGAGATGTTGATTCCTTGATGGCATTTGTAAATGCCTTAAGATGA
>Glyma.07g261500.1.p sequence-type=predicted peptide transcript=Glyma.07g261500.1 locus=Glyma.07g261500 ID=Glyma.07g261500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MALAFTSSISAPTSTFPSSEPKLPQIGSIRISERPIGGAVNFNLSQRRSLVKPVNAEPPRKDSIVPLAATTIVASASETKEEDFEQIASDLDNASPLEIMDRALDKFGNDIAIAFSGAEDVALIEYAKLTGRPFRVFSLDTGRLNPETYQLFDAVEKHYGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGMDGGIGSLVKWNPVANVKGHDIWNFLRTMNVPVNSLHAKGYVSIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGNVKQQKEEDVNGNGLSQSHANGDATTVPDIFNSPNVVNLSRTGIENLAKLEDRKEPWLVVLYAPWCPYCQAMEESYVDLADKLAGSTGMKVGKFRADGEQKEFAKSELQLGSFPTILFFPKHSSRPTIKYPSEKRDVDSLMAFVNALR*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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