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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G44900.1 | AT | minichromosome maintenance (MCM2/3/5) family protein | JGI | N/A | IEA |
| GO:0006260 | GO-bp | DNA replication | EnsemblGenomes | N/A | IEA |
| GO:0006260 | GO-bp | DNA replication | JGI | N/A | IEA |
| GO:0006270 | GO-bp | DNA replication initiation | EnsemblGenomes | N/A | IEA |
| GO:0032508 | GO-bp | DNA duplex unwinding | EnsemblGenomes | N/A | IEA |
| GO:1905775 | GO-bp | negative regulation of DNA helicase activity | EnsemblGenomes | N/A | IEA |
| GO:0005634 | GO-cc | nucleus | EnsemblGenomes | N/A | IEA |
| GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
| GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
| GO:0042555 | GO-cc | MCM complex | EnsemblGenomes | N/A | IEA |
| GO:0003677 | GO-mf | DNA binding | EnsemblGenomes | N/A | IEA |
| GO:0003677 | GO-mf | DNA binding | JGI | N/A | IEA |
| GO:0003678 | GO-mf | DNA helicase activity | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
| PTHR11630 | Panther | DNA REPLICATION LICENSING FACTOR | JGI | N/A | IEA |
| PTHR11630:SF44 | Panther | DNA REPLICATION LICENSING FACTOR MCM2 | JGI | N/A | IEA |
| PF00493 | PFAM | MCM2/3/5 family | JGI | N/A | IEA |
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Glyma.07G238500 not represented in the dataset |
Glyma.07G238500 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
>Glyma.07g238500.1 sequence-type=CDS polypeptide=Glyma.07g238500.1.p locus=Glyma.07g238500 ID=Glyma.07g238500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGATCCGAATAAGGAGAGTAGGAACCAGACGCTCTGGAGTTTTACCCCAATTGTATCAGGTGAAACAATTTATAGGAATTTTCAGAGGCTCATTCTCCCAAGAGAGTCCTGAAACAGTACCTGCTGGTCGACTTCCAATATACAAGCAAGTGATACTATTGATTTCTTTCTTCTTGGTGTTATACATTGATTTCTTTCTTATGCTTATAATTTGTTGTTTCAGGAAGTCACAGGAAGACATTGAAGAGATTGAAAATTTGGCTAAAGACCCTCGAATTCGAGAAAGGAAGGACATAAAAACTGCAATAGCTTTAGCTATGTTTGGAGGCCAAGAAAAAGATGGGGAAGGAAAGCATAGATTGCGAGGAGACATAAATATTCTTCTCCTCAGTGATCCGGGAACAGCAAAGTCTCAGTTTCTCAAGGAGTGGACTCTTGATGGGGGAACACTCATTGTTCTCACTGCTGCAGTTCGAGGAATTTGTCTTATTGATGAACTTGACAAGATGAATGACCAGGATAGGCATTCTGTTCGGTTATTGTGGCTGCAAATCCTTTGGTGGAAGGATGTTGTTGATCCGGTCACTGATGAAATGCTTGCAACATTTGTCGTTGACAGTCACTTCGAGTCACAACCCAAGGGTGCTAATCAAGATGATAAGTCCTTTAGTAAGTCCCAAGATGTCCATGCATCTGCCATGCCAGCTGATCCAGAGGTCCTTGCTAAGATCCTGCTGTTGGTAATACTTCCTCAACAGCTACTGAAGAAGTACATTATATATGCCAAGTTGAATATTTTTCCAAGGTTACAAGATGCTGATATGGATAAACTGTCACATGTCTATGCCGAACTGTGGAGGGAATCTTCACACGGACAAGGAGTCTCTATTTCTGTAAGGCACATTGAATCAATGATAAGGATGTCTGAAGCTCATGCGAGAATGCATCTCAGGCAACATGTTACTCAAGAGGATGTAGGCATGGCAATTCGTGTTCTACTTGAATCATTCATTTCAACTCAAAAATTTGGGGTGCAGAAGGCTCTTCAAAAGAAGGACTATAATGATTTGCTCCTTTTTATTCTCAGCAACCTTGTACAGAATGCTTTGCATTTCGAAGAAATTATCACTGGATCTGTTGCAGTTCTAACGCATATAGATGTCAGAGTAGATGATCTCTACAACAAGGCTCAAGAGCATGACATTTATGACCTGACAACATTTTTCAATAGCAGTCAATTTTCAAGGGCCTATTTTGTATTGGTTGAAGAACGGGAAAAGCAAAAACAGAACGAAAATTACACAAGCCTAGGAACAGTGATGCCTATAGCATCCGAAAACAATATTGTGTCTAAAGTTGGAGGACATGAATCCCATAGTTGCAAAGGCTCCTCAGATGAAGCACCCTTCTTTGCCATCCAATCAGCAACATGA
>Glyma.07g238500.1.p sequence-type=predicted peptide transcript=Glyma.07g238500.1 locus=Glyma.07g238500 ID=Glyma.07g238500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MIRIRRVGTRRSGVLPQLYQVKQFIGIFRGSFSQESPETVPAGRLPIYKQVILLISFFLVLYIDFFLMLIICCFRKSQEDIEEIENLAKDPRIRERKDIKTAIALAMFGGQEKDGEGKHRLRGDINILLLSDPGTAKSQFLKEWTLDGGTLIVLTAAVRGICLIDELDKMNDQDRHSVRLLWLQILWWKDVVDPVTDEMLATFVVDSHFESQPKGANQDDKSFSKSQDVHASAMPADPEVLAKILLLVILPQQLLKKYIIYAKLNIFPRLQDADMDKLSHVYAELWRESSHGQGVSISVRHIESMIRMSEAHARMHLRQHVTQEDVGMAIRVLLESFISTQKFGVQKALQKKDYNDLLLFILSNLVQNALHFEEIITGSVAVLTHIDVRVDDLYNKAQEHDIYDLTTFFNSSQFSRAYFVLVEEREKQKQNENYTSLGTVMPIASENNIVSKVGGHESHSCKGSSDEAPFFAIQSAT*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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