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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G21530.1 | AT | Transducin/WD40 repeat-like superfamily protein | JGI | N/A | IEA |
| GO:0009793 | GO-bp | embryo development ending in seed dormancy | EnsemblGenomes | N/A | IEA |
| GO:0030071 | GO-bp | regulation of mitotic metaphase/anaphase transition | EnsemblGenomes | N/A | IEA |
| GO:0031145 | GO-bp | anaphase-promoting complex-dependent catabolic process | EnsemblGenomes | N/A | IEA |
| GO:0048481 | GO-bp | plant ovule development | EnsemblGenomes | N/A | IEA |
| GO:0005680 | GO-cc | anaphase-promoting complex | EnsemblGenomes | N/A | IEA |
| GO:0005515 | GO-mf | protein binding | EnsemblGenomes | N/A | IEA |
| KOG4640 | KOG | Anaphase-promoting complex (APC), subunit 4 | JGI | N/A | IEA |
| PTHR13260 | Panther | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 (APC4) (CYCLOSOME SUBUNIT 4) | JGI | N/A | IEA |
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Glyma.07G190600 not represented in the dataset |
Glyma.07G190600 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.07g190600 | Wm82.a4.v1 | ISS | As supplied by JGI |
| Glyma07g30983 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.07g190600.1 sequence-type=CDS polypeptide=Glyma.07g190600.1.p locus=Glyma.07g190600 ID=Glyma.07g190600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAAACCGACGAATCCTCTCGCGTGATTCCCTTTCAGCTTCAATTCGATAAACCCCTCGCTTCTCAGATCAAAATTGCGGAGTGGAATCCCGAGAAGGACTTGCTCGCCATGGTGACTGACGATTCTAAGATCTTGCTCCATCGTTTCAATTGGCAACGCTTGTGGACCATTACTCCAGGAAGATGCATAACATCTTTGTGTTGGCGTCCTGATGGAAAAGCAATTGCTGTTGGGCTTGATGACGGGACATTGTCACTGCATGATGTTGAGAATGGAAAGCTATTAAGAAGCTTAAAATCACATTGCGCTGCCATTATATGTCTCAACTGGGAGGAGGAGAGTCAGCTAATTACAGATGACTTTGGTCACACTTCCAAATATGAAGATAGAACCTCTCGTTTCTTTCCTCCTGCTCCAAGAGTTCCTCGGATGCCTGGATTGGTATCTGGGGATAATGGCTTCATGGATGATAGCGAAGATTCATTTCAGGAGCTGTCAAATTCTTCTCACCAACGATTCAACATCCTATGCAGTGCAGATAAAGATGGAAACATTTGTTTTAGTATATTTGGCATCTTCCCTATAGGGAAAGTTAACATACACAACCTCACTTTTCCTACTTTCTGTGATGGTTCAGAAATGAGTAATGGAGTTTCAAATGCTTTGATACACAAGGTTGCTTTATCAAAAGATCTTTGTCGTTTGATAGTCACGTGCTCAGGAGACCTTGTTAAAGTTGGTGATGACTTGGGAGAAATTCAAATGGTTGGGAACAATGAGCATGGTCTGCATTGCTTAGCACTGAACACAGCTATATTTTGGAATAGGAAAAATGAGCTTCACCAGGTAGCTCAACAAGCTTCTAACATAGAGGATTTGACTGAGGTTGTTCGGACATCATTATCAGTTATGTGTAGGCAATGGTCTGATGCCATGAACACATTTCAGGAGAAGTTCAGATCTTTGTCTACTCTGATAATAAATCATGGACTTGATTCGTCACCTCAAGAGGAGTTTCTGAGCCTTTTGGGTGGTGCAAGGACTAGCCCACCAGTTCATCAATTTCTCGTTAACACTCTTGGAGAAGTGGGTGTTAAGCGTATTTCAAAGGTTCTCTCCGGTGCAGGCAAAGAACTTCAACGTATTGTCTTGGACCACCTCCAGCCTGCTGTAGAAGTGATTGGATTCAGAATAGGAGAACTAAGAGGGCTTTCAAGATGGCGTGCACGCTATCACGGCATTGGCTTGGATGAATCACTTATTAACAATGCAACAGAAAAGGCTGGTATGCTACTTGTACAAGTTGAACGATTTATGAGGGTTCTTTCATCTGTTGTGCAGCAGTACTCAAACTTCTTCAACTGGCTATTGAAGTGTATAAAATTACTCATGTCAGAACCAAGTGACCAGCTTCTACCATATAACAGTGAACTTGTTATTGTATTCCTGAAGTTTCTCTATGAACAAGATCCAGTTAAACAATTGCTGGAAGTATCAGAAACAGAATATGAAGTTGAAATTGATTTGGAAACAATGCAGAGAGTTAGAGAATTAGTTCAGTTTGGGGGATTTGCTGACACTGAATATCTAAGGAGAACATTGGTTAAAGAATTTCAGCTGATGGAATTAAGCTTTAAAGAGGCTTTTGAAATGCCTTTTACCACAATATCAAGAAAGATACTTTGTGAGGATATACTACCTCTGTTTCCTCTTCCATCTTTGCCAAAATCATCTTCTTCCATGTGGATTCCCACTTCAGTATCATATTATGAGGATCCCTCTAGAGCTTCTGTGCCACCTTACTCTTGTCAAAACCAGTTTATTGATTACATATCTTTCCAAGTACCTGATGAGTGTTTCTCAGATATTGTAAATTGTATATGCATAGTCAGAGGATTCATGCATGACTCAGACTGTCTAAAGAAGGGGTATAGTTCTTTGGAAGCTGTACTGTTATGTGTTCCTGTTGATTATCAATGTGTGGATCTGTCTTTGTACAAGGATAGTCAAATCGTCCTGTTACTAAACAAAGCTACTAATACATCAGAAAGTGCTGGAGATGGTTGTATGATGATTCTGCAAGTAAGTGATCTACCATATGTCTCTATGTCAAGATCTGCTTGTATAGATGTTTGGAGGTTACCAGAACTAAAGGATTCTGTCGCTTACCTGAATATTGGGGATGAGAAATCTCGCACCATTCGTCATTCTGTAATTGCTCCCTTGGCAGTTAGTGCATCAAGAGGCGTGGCTTGTGTATTTGCTGCAACAAAGCGTGCTCTAGTCTACATTTTGGAGGAAGATGAAGATGAGGTCTCGGATGTAGAATAG
>Glyma.07g190600.1.p sequence-type=predicted peptide transcript=Glyma.07g190600.1 locus=Glyma.07g190600 ID=Glyma.07g190600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 METDESSRVIPFQLQFDKPLASQIKIAEWNPEKDLLAMVTDDSKILLHRFNWQRLWTITPGRCITSLCWRPDGKAIAVGLDDGTLSLHDVENGKLLRSLKSHCAAIICLNWEEESQLITDDFGHTSKYEDRTSRFFPPAPRVPRMPGLVSGDNGFMDDSEDSFQELSNSSHQRFNILCSADKDGNICFSIFGIFPIGKVNIHNLTFPTFCDGSEMSNGVSNALIHKVALSKDLCRLIVTCSGDLVKVGDDLGEIQMVGNNEHGLHCLALNTAIFWNRKNELHQVAQQASNIEDLTEVVRTSLSVMCRQWSDAMNTFQEKFRSLSTLIINHGLDSSPQEEFLSLLGGARTSPPVHQFLVNTLGEVGVKRISKVLSGAGKELQRIVLDHLQPAVEVIGFRIGELRGLSRWRARYHGIGLDESLINNATEKAGMLLVQVERFMRVLSSVVQQYSNFFNWLLKCIKLLMSEPSDQLLPYNSELVIVFLKFLYEQDPVKQLLEVSETEYEVEIDLETMQRVRELVQFGGFADTEYLRRTLVKEFQLMELSFKEAFEMPFTTISRKILCEDILPLFPLPSLPKSSSSMWIPTSVSYYEDPSRASVPPYSCQNQFIDYISFQVPDECFSDIVNCICIVRGFMHDSDCLKKGYSSLEAVLLCVPVDYQCVDLSLYKDSQIVLLLNKATNTSESAGDGCMMILQVSDLPYVSMSRSACIDVWRLPELKDSVAYLNIGDEKSRTIRHSVIAPLAVSASRGVACVFAATKRALVYILEEDEDEVSDVE*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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