Glyma.07G168700

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Report for Sequence Feature Glyma.07G168700

Feature Type:	gene_model
Chromosome:	Gm07
Start:	28009710
stop:	28017821
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07G168700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G49680.1	AT	branched-chain aminotransferase 3	JGI	N/A	IEA
GO:0016020	GO-cc	membrane	EnsemblGenomes	N/A	IEA
GO:0016021	GO-cc	integral component of membrane	EnsemblGenomes	N/A	IEA
BRANCHED-CHAIN-AA-SYN-PWY	SoyCyc9	superpathway of branched chain amino acid biosynthesis	Plant Metabolic Network		ISS
LEU-DEG2-PWY	SoyCyc9	L-leucine degradation I	Plant Metabolic Network		ISS
LEUSYN-PWY	SoyCyc9	L-leucine biosynthesis	Plant Metabolic Network		ISS
GN7V-68020	SoyCyc9-rxn	leucine transaminase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.07G168700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07G168700 not represented in the dataset	Glyma.07G168700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.07G168700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.07g168700	Wm82.a4.v1	ISS	As supplied by JGI

Transcripts of Glyma.07G168700

Limit To All Plant Sequences

>Glyma.07g168700.2 sequence-type=transcript locus=Glyma.07g168700 ID=Glyma.07g168700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TCTTACTACCTTCTTTTTTCCTAGCCTAATCTGTTTTCCCTTTGCAGCTTCGAAAGCAGTTTCCTCTCACTTCGCAGAATGTTCTGGAAGCCGCCTCTCCTCTCAGGCCTTCTGCCACTCTGTCTTCTGATTCCTACAGTTCCATGAAGAAAGTGGATGAAGAGACTGGCAAATACTATGGTAGAAAGGCCGTGTCATTTGTCTTGAAGAGACAACCTTGGGTTTGGGCTTCAACCCACTGATTATATGTATATCATGAAATGCACACGAGGTGGATCCTTTTCCAAAGGTGAACTGCAGCGTTTTGGGAACATCGAGTTGAACCCCTCCGTTGGAGTTTTAAACTATGGCCAGGGGATTGAGCATATGAATATGATGATGAAGATGCGGAATATTTCTCTCATTTTTTGTTCCAATTTTGTGAAGGACTTGGGGAGGCCTATGATGGAAATATTGTATTTGCAAGTGACTTGGAAACTTTTGGTGGTGGGCATAATGACCCAATCAGTGTGGCTTTGGGAGGATCTGAAGACAAGGGTTTCAATACTCAAAGGGCCGCAAAGGGATGGCCATTACCACATGCCCCATCCAACCAATGCACCAACAACATACATCACGACCTCACTACCTCATAAATTAATCATGGCATCACATCTTGGGGCATCCATCTTAGTATATTCTAAGACATCTAGCTTTTCATCATCAAAAAAGGTTGAGCACCACCACACCTTGCATCTCGTGTAGTAGTGTAAATAGTCACAAATTGCCATTCTCTTTATCTAGTATTATCTAGTTTTAGTTGATCATATCtgatgcaatcctaccccgcaagggcattggatagaaaaactccaagtagattgggccagagatgcaagagaagaccctagggttcttatgagccttagggtagatttcaggcccatgggctaagtacgagtccgcttatctttgtaaatattagattaaggtttcattatttttgggccttgtatttagggctccataatgtaggtagggtaccctagaaatataggatttttcagcccttgtattttagggcacctagactagtttttgtattaggggtagttttgtaatttcacatgctctaagtggatatttgatgtgtgtggttggaaataaatttaattgaattggtagaagcccaaatcaattaaattttagagggggaggtgagcatttgcttactacaccccattgccacatcatatagtcacactttgtgcatgttcttcacgcttttcatgcctcatgacacctaagcacacttagtggagaatcttggaattgatcttggattagtgggctgaaccataactaaaattcactaatcataattagtgaaattttggctccaaagtttggctccacaaattcaatttcaaattcaagtgaaatttgaatttccctccaattttttgtgacacttaggctataaatagaggtcatgtgtgtgcatttttttcaactttgatcatttgaatattaaaattcagatttcagagctcatttagagcacaaaatttcgtgctcttctcttcctctcccttcattcatctccttcttcctccaagctcttatccatggcctcctatggtggtgagcttcttctagactcatcttctccttgaagttgcgtctcctctctctcttcctttcttcattccgctgccattcatcttccaagaagcaaaggaatccattgatgaagaagatcctaggcctacaagctccaatggagcttgcatcaATATCTCAAAATATATTTAGTTGTATCCAATCAATAATAAATCAAATGTCTTTTCCATTTTTCAAAAATTCAAACCTCTTGATGAAAAGAGGTATCCTTGAGTGTTTTGACATGGCAGATTCCAAACCATCTTCCACACCCTATCCACAACACCAAGTCTCAAGTTACATAATGGAACACCAACCATCGATGCAACCCAATATCATCAAATTATTGAGGCTTTACAATACTTAAATCTCATTTGACCTAATCTCTCCTTTGCCGTTAATAAACTCGCCTAGTTCATGCACAAACCAACCAACCTTCTTCTCCAACACCTTAAAAGGCTTCTCTGATACCTCAAATCAACCATCAACCTTGACATCATCATTAAGAAACCCATCTCACTAAAATTGATTGCCTATACCAATGCAGATGAGCggg

Coding sequences of Glyma.07G168700

Limit To All Plant Sequences

>Glyma.07g168700.1 sequence-type=CDS polypeptide=Glyma.07g168700.1.p locus=Glyma.07g168700 ID=Glyma.07g168700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTATATCATGAAATGCACACGAGGTGGATCCTTTTCCAAAGGTGAACTGCAGCGTTTTGGGAACATCGAGTTGAACCCCTCCGTTGGAGTTTTAAACTATGGCCAGGGGATTGAGCATATGAATATGATGATGAAGATGCGGAATATTTCTCTCATTTTTTGTTCCAATTTTGTGAAGGACTTGGGGAGGCCTATGATGGAAATATTGTATTTGCAAGTGACTTGGAAACTTTTGGTGGTGGGCATAATGACCCAATCAGTGTGGCTTTGGGAGGATCTGAAGACAAGGGTTTCAATACTCAAAGGGCCGCAAAGGGATGGCCATTACCACATGCCCCATCCAACCAATGCACCAACAACATACATCACGACCTCACTACCTCATAAATTAATCATGGCATCACATCTTGGGGCATCCATCTTAGTATATTCTAAGACATCTAGCTTTTCATCATCAAAAAAGGTTGAGCACCACCACACCTTGCATCTCGTGTAG

>Glyma.07g168700.2 sequence-type=CDS polypeptide=Glyma.07g168700.2.p locus=Glyma.07g168700 ID=Glyma.07g168700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTATATCATGAAATGCACACGAGGTGGATCCTTTTCCAAAGGTGAACTGCAGCGTTTTGGGAACATCGAGTTGAACCCCTCCGTTGGAGTTTTAAACTATGGCCAGGGGATTGAGCATATGAATATGATGATGAAGATGCGGAATATTTCTCTCATTTTTTGTTCCAATTTTGTGAAGGACTTGGGGAGGCCTATGATGGAAATATTGTATTTGCAAGTGACTTGGAAACTTTTGGTGGTGGGCATAATGACCCAATCAGTGTGGCTTTGGGAGGATCTGAAGACAAGGGTTTCAATACTCAAAGGGCCGCAAAGGGATGGCCATTACCACATGCCCCATCCAACCAATGCACCAACAACATACATCACGACCTCACTACCTCATAAATTAATCATGGCATCACATCTTGGGGCATCCATCTTAGTATATTCTAAGACATCTAGCTTTTCATCATCAAAAAAGGTTGAGCACCACCACACCTTGCATCTCGTGTAG

Predicted protein sequences of Glyma.07G168700

Limit To All Plant Sequences

>Glyma.07g168700.1.p sequence-type=predicted peptide transcript=Glyma.07g168700.1 locus=Glyma.07g168700 ID=Glyma.07g168700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MYIMKCTRGGSFSKGELQRFGNIELNPSVGVLNYGQGIEHMNMMMKMRNISLIFCSNFVKDLGRPMMEILYLQVTWKLLVVGIMTQSVWLWEDLKTRVSILKGPQRDGHYHMPHPTNAPTTYITTSLPHKLIMASHLGASILVYSKTSSFSSSKKVEHHHTLHLV*

>Glyma.07g168700.2.p sequence-type=predicted peptide transcript=Glyma.07g168700.2 locus=Glyma.07g168700 ID=Glyma.07g168700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MYIMKCTRGGSFSKGELQRFGNIELNPSVGVLNYGQGIEHMNMMMKMRNISLIFCSNFVKDLGRPMMEILYLQVTWKLLVVGIMTQSVWLWEDLKTRVSILKGPQRDGHYHMPHPTNAPTTYITTSLPHKLIMASHLGASILVYSKTSSFSSSKKVEHHHTLHLV*

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