Glyma.07G129400

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Report for Sequence Feature Glyma.07G129400

Feature Type:	gene_model
Chromosome:	Gm07
Start:	15397826
stop:	15401368
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07G129400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G57360.1	AT		JGI	N/A	IEA
GO:0000379	GO-bp	tRNA-type intron splice site recognition and cleavage	EnsemblGenomes	N/A	IEA
GO:0090501	GO-bp	RNA phosphodiester bond hydrolysis	EnsemblGenomes	N/A	IEA
GO:0090502	GO-bp	RNA phosphodiester bond hydrolysis, endonucleolytic	EnsemblGenomes	N/A	IEA
GO:0000214	GO-cc	tRNA-intron endonuclease complex	EnsemblGenomes	N/A	IEA
GO:0000213	GO-mf	tRNA-intron endonuclease activity	EnsemblGenomes	N/A	IEA
KOG4772	KOG	Predicted tRNA-splicing endonuclease subunit	JGI	N/A	IEA

Expression Patterns of Glyma.07G129400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07G129400 not represented in the dataset	Glyma.07G129400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.07G129400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.07g129400	Wm82.a4.v1	ISS	As supplied by JGI
Glyma07g15520	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.07G129400

Limit To All Plant Sequences

>Glyma.07g129400.2 sequence-type=transcript locus=Glyma.07g129400 ID=Glyma.07g129400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GACCAGAAGGTTGTACGTTCAAAATTGCAAAACTTGCCTTGTTACTTCTTGGTGCCACTTTGTCAAATTGGGCACAGTGTAAATGACTATTTTGTTCATGAATGTGTAAAACCCAGTGAGGTCGCACCGCCGTCGCAGAGTCGCAGGACCACCAGGCCCCGTCGAACGCCGCTCTAGGCCGCGTCGAACATCGCAGGTCCCCACCGGAGCCGTCGAAGGCATTGCGGCAGGCCGCCGTCGTCGTCCCTTTGAGGCTTTGACCCAGTTTCAAAAGCCCTTAAAGTATTTCTTCCCTTTCGTAAGACACTTCTCAGTTCTCTCTTTCTCCTCTTTCGCACATTGCTTCTGACCCGTTTGCAACCGCCGGACGTTCACGCTGCACCACCGCTGCTGCTGTACGCCACCGTCGCCGATTGCGCCTCTGTTTTGCctcttttgtgtgttagtggtttgttctttgttctCTTCAATCGGTTTGTTCTCACAGCCTTGATCAATGGAAGGCAAGACAAGGGGTTGTTCTTCAAGTGAAGATAGTGATGGTGAGATCTATTTGCAAAATGCAAGTGATGAAGAGGAGCTTGGCTCTTCATCTGGTTCTATGCCCAAGTTGCAGTTCAGGAACGTGAAATCCAAAGGCTGTTGGAATGAAGAAATGGGAATGGGAGAAGTCATTGAGAAGAATGGCAAAATGTGGATAACAACTGGAATTGTTCGCAGTGGCAAGATTTATTCTTCAATTGAAGAGACTTTGTATCTTATGGAACTAGGAGCCTTAGATATCGTAGATAATGATGGTAGAAGCATATCTTTAACAGAAATGTATGAAAAGGTTGCTAGCGGGAAGAGTGGATGTTGTTGGGAGCTGTTTGAGGTTTACAGGCACCTCAAGTCTCTTGGCTACATTATTGGCCGGCATGGTGTTGCTTGGAGTTTGAAGAGTATTAAAAGTTCCCATAAAGCTGCTGCTGTTGAAGTCACAGAAGAAAGCAAACAACTAGAAGACACTGATTCTAAATCAGAGCTTTCCATCAATAAGTTATGGGTCTTGCTAACCAGTGCTCTTAGGACATTGGTTAAGAAACTAAAAGGAGAAAGTATTTATGTAGAAATCATAGGAGAGCGTAAAAAAAGTCATGAACAATGCAATTTTGTGCATTCCAATAAAAACATTTCTCCTTTTAGTTTTCTAGCCAATGCGGTACAGGCACTAGTTAGCACATGCCATAAGTTATTTGGAGAGTTGCAGGTAAATGATTTGAGGCCAGACTTTGATGTTTATCTTCCAAACAGCAGGTTTAGAAAGTCTTCTCCCGGTGATCCAAGTTTTCTACTGTACTTATCTAGGGTTCAAAATCCACCATCTAGAGCAGAGATTGAAGCCCTTGAGAAACAATGTGGTGGCATCCCTTTGAAAATCTGCCTGGTCACAGAGGGAAGGGTCAGTTTTTTTTCCTTTGACAAGGTGGAACTTCCTGTTATACCCTGAACTTTTGGTACCAAGTCTACCTTTCCACTCTCGGCAGGGGGCAATGAAAACCAAGGATTGTAACAAGAGAATAATGGGTAGTTGTAAACTTGTAGCTTGTAGGATCCAATGATGTGCAAGAAAGCTGCAGAAGCTGTGGTAAAGTGATCAAGCAAATGGGCTCAACTTCTAAAATTCGATTCTTGTCAAACTGACCATGATTCTGTGTGAGAGCATGCTTTTGTTGATTGACCATAACAAGTTGACGGCAGTGCGTTTTCATATATTATAGAATATAGACTATATAGAGAACGAGAAAAGTATTTTGTTGGATGCATGATGTACAATTTAGTTATAATTAATTTAAAAGAGAAATGACTAAATTGTAATTTTCTTTTAGCAAATCGTGACATGATTTCAGGATTTCATTAAATGAAATGTCTTCAATATATTGGTCC

>Glyma.07g129400.3 sequence-type=transcript locus=Glyma.07g129400 ID=Glyma.07g129400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GACCAGAAGGTTGTACGTTCAAAATTGCAAAACTTGCCTTGTTACTTCTTGGTGCCACTTTGTCAAATTGGGCACAGTGTAAATGACTATTTTGTTCATGAATGTGTAAAACCCAGTGAGGTCGCACCGCCGTCGCAGAGTCGCAGGACCACCAGGCCCCGTCGAACGCCGCTCTAGGCCGCGTCGAACATCGCAGGTCCCCACCGGAGCCGTCGAAGGCATTGCGGCAGGCCGCCGTCGTCGTCCCTTTGAGGCTTTGACCCAGTTTCAAAAGCCCTTAAAGTATTTCTTCCCTTTCGTAAGACACTTCTCAGTTCTCTCTTTCTCCTCTTTCGCACATTGCTTCTGACCCGTTTGCAACCGCCGGACGTTCACGCTGCACCACCGCTGCTGCTGTACGCCACCGTCGCCGATTGCGCCTCTGTTTTGCGTACTGAACTGCACTCCTCCTTATTCCCAAGCCTTGATCAATGGAAGGCAAGACAAGGGGTTGTTCTTCAAGTGAAGATAGTGATGGTGAGATCTATTTGCAAAATGCAAGTGATGAAGAGGAGCTTGGCTCTTCATCTGGTTCTATGCCCAAGTTGCAGTTCAGGAACGTGAAATCCAAAGGCTGTTGGAATGAAGAAATGGGAATGGGAGAAGTCATTGAGAAGAATGGCAAAATGTGGATAACAACTGGAATTGTTCGCAGTGGCAAGATTTATTCTTCAATTGAAGAGACTTTGTATCTTATGGAACTAGGAGCCTTAGATATCGTAGATAATGATGGTAGAAGCATATCTTTAACAGAAATGTATGAAAAGGTTGCTAGCGGGAAGAGTGGATGTTGTTGGGAGCTGTTTGAGGTTTACAGGCACCTCAAGTCTCTTGGCTACATTATTGGCCGGCATGGTGTTGCTTGGAGTTTGAAGAGTATTAAAAGTTCCCATAAAGCTGCTGCTGTTGAAGTCACAGAAGAAAGCAAACAACTAGAAGACACTGATTCTAAATCAGAGCTTTCCATCAATAAGTTATGGGTCTTGCTAACCAGTGCTCTTAGGACATTGGTTAAGAAACTAAAAGGAGAAAGTATTTATGTAGAAATCATAGGAGAGCGTAAAAAAAGTCATGAACAATGCAATTTTGTGCATTCCAATAAAAACATTTCTCCTTTTAGTTTTCTAGCCAATGCGGTACAGGCACTAGTTAGCACATGCCATAAGTTATTTGGAGAGTTGCAGGTAAATGATTTGAGGCCAGACTTTGATGTTTATCTTCCAAACAGCAGGTTTAGAAAGTCTTCTCCCGGTGATCCAAGTTTTCTACTGTACTTATCTAGGAATTCATGGTGGCAGACATGCTACTTCATTGTGTGACATGTGTGTGGTTGGGGTGGGATCTTCTAAGGTGCAGGTGGGAGGCAATGTGGCTATGTTATTTCTCAAAGTAGAATACTTAGAATTGATAAAGGCATTGTACCTGTCTGTTCTCTGATAGGATTTAAAGGGTTCAAAATCCACCATCTAGAGCAGAGATTGAAGCCCTTGAGAAACAATGTGGTGGCATCCCTTTGAAAATCTGCCTGGTCACAGAGGGAAGGGTCAGTTTTTTTTCCTTTGACAAGGTGGAACTTCCTGTTATACCCTGAACTTTTGGTACCAAGTCTACCTTTCCACTCTCGGCAGGGGGCAATGAAAACCAAGGATTGTAACAAGAGAATAATGGGTAGTTGTAAACTTGTAGCTTGTAGGATCCAATGATGTGCAAGAAAGCTGCAGAAGCTGTGGTAAAGTGATCAAGCAAATGGGCTCAACTTCTAAAATTCGATTCTTGTCAAACTGACCATGATTCTGTGTGAGAGCATGCTTTTGTTGATTGACCATAACAAGTTGACGGCAGTGCGTTTTCATATATTATAGAATATAGACTATATAGAGAACGAGAAAAGTATTTTGTTGGATGCATGATGTACAATTTAGTTATAATTAATTTAAAAGAGAAATGACTAAATTGTAATTTTCTTTTAGCAAATCGTGACATGATTTCAGGATTTCATTAAATGAAATGTCTTCAATATATTGGTCC

Coding sequences of Glyma.07G129400

Limit To All Plant Sequences

>Glyma.07g129400.1 sequence-type=CDS polypeptide=Glyma.07g129400.1.p locus=Glyma.07g129400 ID=Glyma.07g129400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAGGCAAGACAAGGGGTTGTTCTTCAAGTGAAGATAGTGATGGTGAGATCTATTTGCAAAATGCAAGTGATGAAGAGGAGCTTGGCTCTTCATCTGGTTCTATGCCCAAGTTGCAGTTCAGGAACGTGAAATCCAAAGGCTGTTGGAATGAAGAAATGGGAATGGGAGAAGTCATTGAGAAGAATGGCAAAATGTGGATAACAACTGGAATTGTTCGCAGTGGCAAGATTTATTCTTCAATTGAAGAGACTTTGTATCTTATGGAACTAGGAGCCTTAGATATCGTAGATAATGATGGTAGAAGCATATCTTTAACAGAAATGTATGAAAAGGTTGCTAGCGGGAAGAGTGGATGTTGTTGGGAGCTGTTTGAGGTTTACAGGCACCTCAAGTCTCTTGGCTACATTATTGGCCGGCATGGTGTTGCTTGGAGTTTGAAGAGTATTAAAAGTTCCCATAAAGCTGCTGCTGTTGAAGTCACAGAAGAAAGCAAACAACTAGAAGACACTGATTCTAAATCAGAGCTTTCCATCAATAAGTTATGGGTCTTGCTAACCAGTGCTCTTAGGACATTGGTTAAGAAACTAAAAGGAGAAAGTATTTATGTAGAAATCATAGGAGAGCGTAAAAAAAGTCATGAACAATGCAATTTTGTGCATTCCAATAAAAACATTTCTCCTTTTAGTTTTCTAGCCAATGCGGTACAGGCACTAGTTAGCACATGCCATAAGTTATTTGGAGAGTTGCAGGTAAATGATTTGAGGCCAGACTTTGATGTTTATCTTCCAAACAGCAGGTTTAGAAAGTCTTCTCCCGGTGATCCAAGTTTTCTACTGTACTTATCTAGGGTTCAAAATCCACCATCTAGAGCAGAGATTGAAGCCCTTGAGAAACAATGTGGTGGCATCCCTTTGAAAATCTGCCTGGTCACAGAGGGAAGGGTCAGTTTTTTTTCCTTTGACAAGGTGGAACTTCCTGTTATACCCTGA

>Glyma.07g129400.2 sequence-type=CDS polypeptide=Glyma.07g129400.2.p locus=Glyma.07g129400 ID=Glyma.07g129400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAGGCAAGACAAGGGGTTGTTCTTCAAGTGAAGATAGTGATGGTGAGATCTATTTGCAAAATGCAAGTGATGAAGAGGAGCTTGGCTCTTCATCTGGTTCTATGCCCAAGTTGCAGTTCAGGAACGTGAAATCCAAAGGCTGTTGGAATGAAGAAATGGGAATGGGAGAAGTCATTGAGAAGAATGGCAAAATGTGGATAACAACTGGAATTGTTCGCAGTGGCAAGATTTATTCTTCAATTGAAGAGACTTTGTATCTTATGGAACTAGGAGCCTTAGATATCGTAGATAATGATGGTAGAAGCATATCTTTAACAGAAATGTATGAAAAGGTTGCTAGCGGGAAGAGTGGATGTTGTTGGGAGCTGTTTGAGGTTTACAGGCACCTCAAGTCTCTTGGCTACATTATTGGCCGGCATGGTGTTGCTTGGAGTTTGAAGAGTATTAAAAGTTCCCATAAAGCTGCTGCTGTTGAAGTCACAGAAGAAAGCAAACAACTAGAAGACACTGATTCTAAATCAGAGCTTTCCATCAATAAGTTATGGGTCTTGCTAACCAGTGCTCTTAGGACATTGGTTAAGAAACTAAAAGGAGAAAGTATTTATGTAGAAATCATAGGAGAGCGTAAAAAAAGTCATGAACAATGCAATTTTGTGCATTCCAATAAAAACATTTCTCCTTTTAGTTTTCTAGCCAATGCGGTACAGGCACTAGTTAGCACATGCCATAAGTTATTTGGAGAGTTGCAGGTAAATGATTTGAGGCCAGACTTTGATGTTTATCTTCCAAACAGCAGGTTTAGAAAGTCTTCTCCCGGTGATCCAAGTTTTCTACTGTACTTATCTAGGGTTCAAAATCCACCATCTAGAGCAGAGATTGAAGCCCTTGAGAAACAATGTGGTGGCATCCCTTTGAAAATCTGCCTGGTCACAGAGGGAAGGGTCAGTTTTTTTTCCTTTGACAAGGTGGAACTTCCTGTTATACCCTGA

>Glyma.07g129400.3 sequence-type=CDS polypeptide=Glyma.07g129400.3.p locus=Glyma.07g129400 ID=Glyma.07g129400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAGGCAAGACAAGGGGTTGTTCTTCAAGTGAAGATAGTGATGGTGAGATCTATTTGCAAAATGCAAGTGATGAAGAGGAGCTTGGCTCTTCATCTGGTTCTATGCCCAAGTTGCAGTTCAGGAACGTGAAATCCAAAGGCTGTTGGAATGAAGAAATGGGAATGGGAGAAGTCATTGAGAAGAATGGCAAAATGTGGATAACAACTGGAATTGTTCGCAGTGGCAAGATTTATTCTTCAATTGAAGAGACTTTGTATCTTATGGAACTAGGAGCCTTAGATATCGTAGATAATGATGGTAGAAGCATATCTTTAACAGAAATGTATGAAAAGGTTGCTAGCGGGAAGAGTGGATGTTGTTGGGAGCTGTTTGAGGTTTACAGGCACCTCAAGTCTCTTGGCTACATTATTGGCCGGCATGGTGTTGCTTGGAGTTTGAAGAGTATTAAAAGTTCCCATAAAGCTGCTGCTGTTGAAGTCACAGAAGAAAGCAAACAACTAGAAGACACTGATTCTAAATCAGAGCTTTCCATCAATAAGTTATGGGTCTTGCTAACCAGTGCTCTTAGGACATTGGTTAAGAAACTAAAAGGAGAAAGTATTTATGTAGAAATCATAGGAGAGCGTAAAAAAAGTCATGAACAATGCAATTTTGTGCATTCCAATAAAAACATTTCTCCTTTTAGTTTTCTAGCCAATGCGGTACAGGCACTAGTTAGCACATGCCATAAGTTATTTGGAGAGTTGCAGGTAAATGATTTGAGGCCAGACTTTGATGTTTATCTTCCAAACAGCAGGTTTAGAAAGTCTTCTCCCGGTGATCCAAGTTTTCTACTGTACTTATCTAGGAATTCATGGTGGCAGACATGCTACTTCATTGTGTGA

Predicted protein sequences of Glyma.07G129400

Limit To All Plant Sequences

>Glyma.07g129400.1.p sequence-type=predicted peptide transcript=Glyma.07g129400.1 locus=Glyma.07g129400 ID=Glyma.07g129400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEGKTRGCSSSEDSDGEIYLQNASDEEELGSSSGSMPKLQFRNVKSKGCWNEEMGMGEVIEKNGKMWITTGIVRSGKIYSSIEETLYLMELGALDIVDNDGRSISLTEMYEKVASGKSGCCWELFEVYRHLKSLGYIIGRHGVAWSLKSIKSSHKAAAVEVTEESKQLEDTDSKSELSINKLWVLLTSALRTLVKKLKGESIYVEIIGERKKSHEQCNFVHSNKNISPFSFLANAVQALVSTCHKLFGELQVNDLRPDFDVYLPNSRFRKSSPGDPSFLLYLSRVQNPPSRAEIEALEKQCGGIPLKICLVTEGRVSFFSFDKVELPVIP*

>Glyma.07g129400.2.p sequence-type=predicted peptide transcript=Glyma.07g129400.2 locus=Glyma.07g129400 ID=Glyma.07g129400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEGKTRGCSSSEDSDGEIYLQNASDEEELGSSSGSMPKLQFRNVKSKGCWNEEMGMGEVIEKNGKMWITTGIVRSGKIYSSIEETLYLMELGALDIVDNDGRSISLTEMYEKVASGKSGCCWELFEVYRHLKSLGYIIGRHGVAWSLKSIKSSHKAAAVEVTEESKQLEDTDSKSELSINKLWVLLTSALRTLVKKLKGESIYVEIIGERKKSHEQCNFVHSNKNISPFSFLANAVQALVSTCHKLFGELQVNDLRPDFDVYLPNSRFRKSSPGDPSFLLYLSRVQNPPSRAEIEALEKQCGGIPLKICLVTEGRVSFFSFDKVELPVIP*

>Glyma.07g129400.3.p sequence-type=predicted peptide transcript=Glyma.07g129400.3 locus=Glyma.07g129400 ID=Glyma.07g129400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEGKTRGCSSSEDSDGEIYLQNASDEEELGSSSGSMPKLQFRNVKSKGCWNEEMGMGEVIEKNGKMWITTGIVRSGKIYSSIEETLYLMELGALDIVDNDGRSISLTEMYEKVASGKSGCCWELFEVYRHLKSLGYIIGRHGVAWSLKSIKSSHKAAAVEVTEESKQLEDTDSKSELSINKLWVLLTSALRTLVKKLKGESIYVEIIGERKKSHEQCNFVHSNKNISPFSFLANAVQALVSTCHKLFGELQVNDLRPDFDVYLPNSRFRKSSPGDPSFLLYLSRNSWWQTCYFIV*

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