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Report for Sequence Feature Glyma.07G121000

Feature Type:gene_model
Chromosome:Gm07
Start:14023351
stop:14029811
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07G121000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G26667.1AT P-loop containing nucleoside triphosphate hydrolases superfamily protein JGI N/AIEA
AT5G26667.2AT P-loop containing nucleoside triphosphate hydrolases superfamily protein JGI N/AIEA
GO:0006139GO-bp nucleobase-containing compound metabolic process EnsemblGenomesN/AIEA
GO:0006139GO-bp nucleobase-containing compound metabolic process JGI N/AIEA
GO:0006207GO-bp 'de novo' pyrimidine nucleobase biosynthetic process EnsemblGenomesN/AIEA
GO:0006221GO-bp pyrimidine nucleotide biosynthetic process EnsemblGenomesN/AIEA
GO:0016310GO-bp phosphorylation EnsemblGenomesN/AIEA
GO:0046939GO-bp nucleotide phosphorylation EnsemblGenomesN/AIEA
GO:0046940GO-bp nucleoside monophosphate phosphorylation EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0000166GO-mf nucleotide binding EnsemblGenomesN/AIEA
GO:0004127GO-mf cytidylate kinase activity EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
GO:0009041GO-mf uridylate kinase activity EnsemblGenomesN/AIEA
GO:0016301GO-mf kinase activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0019205GO-mf nucleobase-containing compound kinase activity EnsemblGenomesN/AIEA
GO:0019205GO-mf nucleobase-containing compound kinase activity JGI N/AIEA
KOG3079 KOG Uridylate kinase/adenylate kinase JGI N/AIEA
PTHR23359Panther NUCLEOTIDE KINASE JGI N/AIEA
PF00406PFAM Adenylate kinase JGI N/AIEA
PWY-5687SoyCyc9 pyrimidine ribonucleotides interconversion Plant Metabolic Network ISS
PWY-7176SoyCyc9 UTP and CTP de novo biosynthesis Plant Metabolic Network ISS
PWY-7196SoyCyc9 superpathway of pyrimidine ribonucleosides salvage Plant Metabolic Network ISS
PWY-7197SoyCyc9 pyrimidine deoxyribonucleotide phosphorylation Plant Metabolic Network ISS
PWY-7205SoyCyc9 CMP phosphorylation Plant Metabolic Network ISS
PWY-7208SoyCyc9 superpathway of pyrimidine nucleobases salvage Plant Metabolic Network ISS
PWY-7211SoyCyc9 superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis Plant Metabolic Network ISS
PWY0-162SoyCyc9 superpathway of pyrimidine ribonucleotides de novo biosynthesis Plant Metabolic Network ISS
GN7V-57850SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Expression Patterns of Glyma.07G121000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07G121000 not represented in the dataset
Glyma.07G121000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.07G121000
ParalogEvidenceComments
Glyma.03g102700 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07G121000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.07g121000 Wm82.a4.v1ISS As supplied by JGI
Glyma07g12840 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.07G121000
>Glyma.07g121000.2 sequence-type=transcript locus=Glyma.07g121000 ID=Glyma.07g121000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTTCACTTCTCTATTTTTCCTTTCCCCCAAAAAATAAAAAGCACACCTTCATTCGTTCCTCTTTCTTTCTTCCAACTCTATAAATATCAATCAAAATTCCCCTCCACACTCATTCTCCCATCGTTTTCCCTTTCTCTCTCTCATTCTCTTCTCCATCGCGCGTAAGAAACACATTTTAGTTGCTACTAATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGACCTATCGAAGAGGTATTTGAGACAGTCAAAGCAATTTTTGGTCCAAAGAATGACAAGGCTGATTGAGCATGTTCATCTTGACTCCATGGTGGAAATTTAGAGGTCATATCAGTATTGGTGGCTTGTTCTATTGTGTCACATTTTGTTATTATAGTATAGAAAATCGTAGTTTATACCTGAGGGTTTTACCTCTGTATTCTAATGTTATATCTTGTTGACTCATTCATTGATATTGCAATAAAGATTTTCGTGTGGGATTCTTTCTACC

>Glyma.07g121000.3 sequence-type=transcript locus=Glyma.07g121000 ID=Glyma.07g121000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTCTATTTTTCCTTTCCCCCAAAAAATAAAAAGCACACCTTCATTCGTTCCTCTTTCTTTCTTCCAACTCTATAAATATCAATCAAAATTCCCCTCCACACTCATTCTCCCATCGTTTTCCCTTTCTCTCTCTCATTCTCTTCTCCATCGCGCGTAAGAAACACATTTTAGTTGCTACTAATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGACCTATCGAAGAGGTATTTGAGACAGTCAAAGCAATTTTTGGTCCAAAGAATGACAAGGCTGATTGAGCATGTTCATCTTGACTCCATGGTGGAAATTTAGAGGTAAAAGTTGCAACGTATGGTAGAAGGTGCCATATATTTATATTTGCATATGATGCATTTTACTGTACTATCTGGTCTTGAAACCTGTTGTGGATTTCTGACTAGTGGAAGCAATAAAGTTTACTGAGTAGGGCAATCTAACATTAGAAGTTTTCTTAGAGTACGGGACAAATATCTTATTTCAATTCTTCTATAGGTTTATCATTTTAAAATTTTAAAGTTAGATATCCTTCCAAGTGGTAAGGCATCTATTCTTTTTGGATTTGCTTTTCGGATCTATGTCTAGGCACTCTATCTGGACAAGATAACACGATCAACCACCTTTTGTATAATACTTTTCTACATGTATGGTTAGTGCTGAAAATTAAAGAATATTCTTTCTTGAATCGTCCAAGTTGTAGACTGTAATTTTGGCTATATCATTGGATGAATCAGGTTTGTTTTATAAGCTACTTGGCATCTTTTCTTTTAAAAATCTAAATTCGTACT

>Glyma.07g121000.4 sequence-type=transcript locus=Glyma.07g121000 ID=Glyma.07g121000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTCTATTTTTCCTTTCCCCCAAAAAATAAAAAGCACACCTTCATTCGTTCCTCTTTCTTTCTTCCAACTCTATAAATATCAATCAAAATTCCCCTCCACACTCATTCTCCCATCGTTTTCCCTTTCTCTCTCTCATTCTCTTCTCCATCGCGCGTAAGAAACACATTTTAGTTGCTACTAATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGGTAATTGATAGTTGTGTTTCTACCATATTTTTTACAAATATAAAAGTTCCTTTGGTACTGAGGACATCACAAATATTTCTTTTAGATTGATGCTGCAAGACCTATCGAAGAGGTATTTGAGACAGTCAAAGCAATTTTTGGTCCAAAGAATGACAAGGCTGATTGAGCATGTTCATCTTGACTCCATGGTGGAAATTTAGAGGTAAAAGTTGCAACGTATGGTAGAAGGTGCCATATATTTATATTTGCATATGATGCATTTTACTGTACTATCTGGTCTTGAAACCTGTTGTGGATTTCTGACTAGTGGAAGCAATAAAGTTTACTGAGTAGGGCAATCTAACATTAGAAGTTTTCTTAGAGTACGGGACAAATATCTTATTTCAATTCTTCTATAGGTTTATCATTTTAAAATTTTAAAGTTAGATATCCTTCCAAGTGGTAAGGCATCTATTCTTTTTGGATTTGCTTTTCGGATCTATGTCTAGGCACTCTATCTGGACAAGATAACACGATCAACCACCTTTTGTATAATACTTTTCTACATGTATGGTTAGTGCTGAAAATTAAAGAATATTCTTTCTTGAATCGTCCAAGTTGTAGACTGTAATTTTGGCTATATCATTGGATGAATCAGGTTTGTTTTATAAGCTACTTGGCATCTTTTCTTTTAAAAATCTAAATTCGTACT
Coding sequences of Glyma.07G121000
>Glyma.07g121000.1 sequence-type=CDS polypeptide=Glyma.07g121000.1.p locus=Glyma.07g121000 ID=Glyma.07g121000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGACCTATCGAAGAGGTATTTGAGACAGTCAAAGCAATTTTTGGTCCAAAGAATGACAAGGTAAATCACTATGTTCGCCTTATGTCAAAACTTTATATGTACAAGTTCCATTTTGTATCGAAGACAAAAATTGGGAATCATTGCCTTCCTTGTTAA

>Glyma.07g121000.2 sequence-type=CDS polypeptide=Glyma.07g121000.2.p locus=Glyma.07g121000 ID=Glyma.07g121000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGACCTATCGAAGAGGTATTTGAGACAGTCAAAGCAATTTTTGGTCCAAAGAATGACAAGGCTGATTGA

>Glyma.07g121000.3 sequence-type=CDS polypeptide=Glyma.07g121000.3.p locus=Glyma.07g121000 ID=Glyma.07g121000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGACCTATCGAAGAGGTATTTGAGACAGTCAAAGCAATTTTTGGTCCAAAGAATGACAAGGCTGATTGA

>Glyma.07g121000.4 sequence-type=CDS polypeptide=Glyma.07g121000.4.p locus=Glyma.07g121000 ID=Glyma.07g121000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAACTGTTGAAGCTGCAAACAAGGATGCAAATGGAAGTCTCCTAGAGAAAAATCCTTCAGTTGTTTTTGTGTTAGGTGGCCCAGGAAGTGGAAAGGGTACCCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCATCTCAGCGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAAAGCAATGCAGGAAAGTGGCAATGACAAATTTCTTATTGATGGTTTTCCCCGCAATGAGGAAAACCGGGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAGCATTTGTCTTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTTCTTAGTAGGAACCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCTAGTCTTCCCGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGGTAATTGATAGTTGTGTTTCTACCATATTTTTTACAAATATAAAAGTTCCTTTGGTACTGAGGACATCACAAATATTTCTTTTAGATTGA
Predicted protein sequences of Glyma.07G121000
>Glyma.07g121000.1.p sequence-type=predicted peptide transcript=Glyma.07g121000.1 locus=Glyma.07g121000 ID=Glyma.07g121000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGTVEAANKDANGSLLEKNPSVVFVLGGPGSGKGTQCANIVQNFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPIEEVFETVKAIFGPKNDKVNHYVRLMSKLYMYKFHFVSKTKIGNHCLPC*

>Glyma.07g121000.2.p sequence-type=predicted peptide transcript=Glyma.07g121000.2 locus=Glyma.07g121000 ID=Glyma.07g121000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGTVEAANKDANGSLLEKNPSVVFVLGGPGSGKGTQCANIVQNFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPIEEVFETVKAIFGPKNDKAD*

>Glyma.07g121000.3.p sequence-type=predicted peptide transcript=Glyma.07g121000.3 locus=Glyma.07g121000 ID=Glyma.07g121000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGTVEAANKDANGSLLEKNPSVVFVLGGPGSGKGTQCANIVQNFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPIEEVFETVKAIFGPKNDKAD*

>Glyma.07g121000.4.p sequence-type=predicted peptide transcript=Glyma.07g121000.4 locus=Glyma.07g121000 ID=Glyma.07g121000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGTVEAANKDANGSLLEKNPSVVFVLGGPGSGKGTQCANIVQNFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKVIDSCVSTIFFTNIKVPLVLRTSQIFLLD*






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