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Report for Sequence Feature Glyma.07G116600

Feature Type:gene_model
Chromosome:Gm07
Start:12903317
stop:12906152
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.07G116600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G19710.2AT aspartate kinase-homoserine dehydrogenase ii JGI N/AIEA
GO:0006520GO-bp cellular amino acid metabolic process EnsemblGenomesN/AIEA
GO:0006520GO-bp cellular amino acid metabolic process JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0055114GO-bp oxidation-reduction process JGI N/AIEA
GO:0004412GO-mf homoserine dehydrogenase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0050661GO-mf NADP binding EnsemblGenomesN/AIEA
GO:0050661GO-mf NADP binding JGI N/AIEA
KOG0455 KOG Homoserine dehydrogenase JGI N/AIEA
PTHR21499Panther ASPARTATE KINASE JGI N/AIEA
PTHR21499:SF3Panther ASPARTOKINASE JGI N/AIEA
PF00742PFAM Homoserine dehydrogenase JGI N/AIEA
PF03447PFAM Homoserine dehydrogenase, NAD binding domain JGI N/AIEA
HOMOSERSYN-PWYSoyCyc9 L-homoserine biosynthesis Plant Metabolic Network ISS
PWY-3001SoyCyc9 superpathway of L-isoleucine biosynthesis I Plant Metabolic Network ISS
PWY-724SoyCyc9 superpathway of L-lysine, L-threonine and L-methionine biosynthesis II Plant Metabolic Network ISS
THRESYN-PWYSoyCyc9 superpathway of L-threonine biosynthesis Plant Metabolic Network ISS
GN7V-44119SoyCyc9-rxn homoserine dehydrogenase Plant Metabolic Network ISS

Expression Patterns of Glyma.07G116600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07G116600 not represented in the dataset
Glyma.07G116600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.



Coding sequences of Glyma.07G116600
>Glyma.07g116600.1 sequence-type=CDS polypeptide=Glyma.07g116600.1.p locus=Glyma.07g116600 ID=Glyma.07g116600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTTCAAAAGAACTTCGACAAGAAAAAGGAGAAGTGGCTAATTTAGAAATTTTTTTTCAACATGTGCACGGAAATCATTTCATACCAAACACTGTGTTAGTGGACTGCACAGCCGACTCCATCATTGCAAGCAATTACGAGGACTGGCTGCGCAAAGGAATACATGTGATCACCCCCAATAAGAAGGCAAATTCAGGACCACTTTATGAGTATTTGAGATTAAGAGCTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGGGCTGGTCTTCCAATTATCAGCACTTTACGTGGCCTTCTTGAGACTGGTGACAGAATATTGGAAATTGAAGGTATCTTCAGTGGGACTTTGAGTTACATCTTTAATAACTTCAAAGATGGTCGGGCTTTTAGTGAGGTGGTAGCTGAAGCAAGGGATGAAGGGTATACCGAGCCCGATCCAAGGGATAACTTGTCTGGAATTGATGTTGCTAGAAAGGTGATAATTCTTGCAAGGGAATCAGGTTTGAAGCTAGAGCTTTCTGATATTCCCGTTGAAAATCTTGTGCCAGAACCATTAAGAGGTAGTTCATCAGCTGAAGAGTTTATGCAACAACTGCCAAAATTTGACGAGGAATTAACAGAGATATTAAAAGATGCAGAGAGTTCTGGAGAAGTCTTGAGATACTTGGGAGTGGTGGATGTGAGTAATGAAAAAGGAGTGGTAGAACTGAGAAGATACAAGAAGGATCATCCCTTTGCACAATTATCTGGATCAGATAATATTATTGCATTCACAACAAGAAGGTATAGAAACCAGCCTCTGATAGTTCGTGGACCTGGAGCTGGTGCCCAAGTCACAGCTGGTGGAAAATTCAACGACATTTTACGACTTGCCTCTTATCTTGGTGCTCCATCATAG
Predicted protein sequences of Glyma.07G116600
>Glyma.07g116600.1.p sequence-type=predicted peptide transcript=Glyma.07g116600.1 locus=Glyma.07g116600 ID=Glyma.07g116600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSKELRQEKGEVANLEIFFQHVHGNHFIPNTVLVDCTADSIIASNYEDWLRKGIHVITPNKKANSGPLYEYLRLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDRILEIEGIFSGTLSYIFNNFKDGRAFSEVVAEARDEGYTEPDPRDNLSGIDVARKVIILARESGLKLELSDIPVENLVPEPLRGSSSAEEFMQQLPKFDEELTEILKDAESSGEVLRYLGVVDVSNEKGVVELRRYKKDHPFAQLSGSDNIIAFTTRRYRNQPLIVRGPGAGAQVTAGGKFNDILRLASYLGAPS*






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