Glyma.07G044300

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Report for Sequence Feature Glyma.07G044300

Feature Type:	gene_model
Chromosome:	Gm07
Start:	3689698
stop:	3693217
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.07G044300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G53910.1	AT	related to AP2 12	JGI	N/A	IEA
GO:0006351	GO-bp	transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	JGI	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0003677	GO-mf	DNA binding	EnsemblGenomes	N/A	IEA
GO:0003700	GO-mf	DNA binding transcription factor activity	EnsemblGenomes	N/A	IEA
GO:0003700	GO-mf	sequence-specific DNA binding transcription factor activity	JGI	N/A	IEA
PF00847	PFAM	AP2 domain	JGI	N/A	IEA

Proteins Associated with Glyma.07G044300

Locus	Gene Symbol	Protein Name
	ERF7	ethylene-responsive transcription factor 7
	ERF52	Ethylene-responsive factor gene 52

Expression Patterns of Glyma.07G044300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.07G044300 not represented in the dataset	Glyma.07G044300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.07G044300

Paralog	Evidence	Comments
Glyma.16g012600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.07G044300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.07g044300	Wm82.a4.v1	ISS	As supplied by JGI
Glyma07g04950	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.07G044300

Limit To All Plant Sequences

>Glyma.07g044300.2 sequence-type=transcript locus=Glyma.07g044300 ID=Glyma.07g044300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CACCAAACTCAATTATACAAAACCCTGAAGAAAGACACAGCCATTGTTTGTTTACTTTCCATTGATTGAGCGAAAGCTTTGTTTTTTCTGCGATCATTTTCCATTGGGTGGAAGAAAGTCTCAACCTTTAGTCGAAAGAGCAAGGATCTGAGTGAGTGAGCGATCATGTGTGGTGGTGCGATTATCTCCGACTTCATTCCAGCGGGTCCCGCCGGCGGGGCGCAGCGCGTGACCGCCGACATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGTCGCTGCTGGACGATGATTTCGAGGCAGGGTTCAGAGAATTCGAGGATGACTCGGAAATCgaggatgtcgatgatgaggacgatgaagaggaggaggagttgaagaagaagaagCCCTTTGGGTTCTCTCGCTCCAACAACAAGGCTGCTTCTAAGCCTCTCTCTCGTGGAGCAACAACTGTGAAATCTGTGGAATCAAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAGTATCGCGGAATCCGCCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATTCGCGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTACGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGGCGCTGCTTCCTCAAAACGTCTCAAGGCGAATCCAGAGGCTCAGCCAATGAAGAAAAATCTGAACTCTGTGAAGCCGAAAATAAACCAGATGTTCAATTTTGGTGACAATCTTGAGGGCTACTACAGCCCTATAGATCAGGTGGAACAGAAACCACTGGTTAACCAGTATGTTAACCGTGCCCCGTTTGCTGGAAATGGAGTTCAAGTCTCACCTGTTACTCCATCTGCTGATGTTACTGCTTACTTCAGCTCTGAGCATTCGAGCAGCTCGTTTGATTATTCTGACCTCGGATGGGGTGAACAAGTCCCCAAGACACCCGAGATCTCATCCATGCTTTCTGCTGCTCCTTTGGACGGTGAATCTCAGTTTGTGCAGGGTGCTGCTGATCAGAATCAGAAGAAGAACAACCTGCTGGATATGGCATCTGTGCAAGATGATTCTGCAAAAACTCTTTCTGAGGAGCTTGCAGACATTGAATCCCAGCTGAAGTTCTTTGAGACCCCTTCTTTTCTTGATGAAGCCTGGGCTGATGCTGCATTGGCGTCTTTGCTCAGTGAAGATGCATCTCAGGATGCTGCTGGAAACCCTATGAACCTTTGGAGCTTCGACGACCTGCCTTCCATGGCAGGAGTCTTCTGAACACCTTCATATCCCTTTTTATGAATTGTGATCGTGATGTTGGTGATGGAATCCACAGCAAGAAAACCAACCTGCTTAAAGCATATGTGGAGTTTATTTATCTTGTAGCTAATGCAGTATAGGACTATATATAGGTTTTTATAGGGTATCCTTTGTGTGAAACTCAAGAGACCTCGTTTTCAGGGGATTTTCTGTTTGATGTCCATAAGGATTATCAATTATGTTATATATGGTCTGGGATACAGTCTTGACTTACAGTTTTTAACTTGGTTGTTTTCATTGTTATGGCAATTTGATTATGATTTGAGACCAGCCATTTTTCAATGCTTTGTGTGGTGGATGATTGCATATCGCCTCTATTATTTTGCTTACTGGTTACTCAGGCCATCTTTAATAGATCGTCCTTGGTGTAAAGTTTTAGCTATTAATGGATGTGGAAAAG

>Glyma.07g044300.3 sequence-type=transcript locus=Glyma.07g044300 ID=Glyma.07g044300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CACCAAACTCAATTATACAAAACCCTGAAGAAAGACACAGCCATTGTTTGTTTACTTTCCATTGATTGAGCGAAAGCTTTGTTTTTTCTGCGATCATTTTCCATTGGGTGGAAGAAAGTCTCAACCTTTAGTCGAAAGAGCAAGGATCTGAGTGAGTGAGCGATCATGTGTGGTGGTGCGATTATCTCCGACTTCATTCCAGCGGGTCCCGCCGGCGGGGCGCAGCGCGTGACCGCCGACATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGTCGCTGCTGGACGATGATTTCGAGGCAGGGTTCAGAGAATTCGAGGATGACTCGGAAATCgaggatgtcgatgatgaggacgatgaagaggaggaggagttgaagaagaagaagCCCTTTGGGTTCTCTCGCTCCAACAACAAGGCTGCTTCTAAGCCTCTCTCTCGTGGAGCAACAACTGTGAAATCTGTGGAATCAAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAGTATCGCGGAATCCGCCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATTCGCGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTACGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGGCGCTGCTTCCTCAAAACGTCTCAAGGCGAATCCAGAGGCTCAGCCAATGAAGAAAAATCTGAACTCTGTGAAGCCGAAAATAAACCAGATGTTCAATTTTGGTGACAATCTTGAGGGCTACTACAGCCCTATAGATCAGGTGGAACAGAAACCACTGGTTAACCAGTATGTTAACCGTGCCCCGTTTGCTGGAAATGGAGTTCAAGTCTCACCTGTTACTCCATCTGCTGATGTTACTGCTTACTTCAGCTCTGAGCATTCGAGCAGCTCGTTTGATTATTCTGACCTCGGATGGGGTGAACAAGTCCCCAAGACACCCGAGATCTCATCCATGCTTTCTGCTGCTCCTTTGGACGGTGAATCTCAGTTTGTGCAGGGTGCTGCTGATCAGAATCAGAAGAAGAACAACCTGCTGGATATGGCATCTGTGCAAGATGATTCTGCAAAAACTCTTTCTGAGGAGCTTGCAGACATTGAATCCCAGCTGAAGTTCTTTGAGACCCCTTCTTTTCTTGATGAAGCCTGGGCTGATGCTGCATTGGCGTCTTTGCTCAGTGAAGATGCATCTCAGGATGCTGCTGGAAACCCTATGAACCTTTGGAGCTTCGACGACCTGCCTTCCATGGCAGGAGTCTTCTGAACACCTTCATATCCCTTTTTATGTAAATAAAGCTACAAGAATTGTGATCGTGATGTTGGTGATGGAATCCACAGCAAGAAAACCAACCTGCTTAAAGCATATGTGGAGTTTATTTATCTTGTAGCTAATGCAGTATAGGACTATATATAGGTTTTTATAGGGTATCCTTTGTGTGAAACTCAAGAGACCTCGTTTTCAGGGGATTTTCTGTTTGATGTCCATAAGGATTATCAATTATGTTATATATGGTCTGGGATACAGTCTTGACTTACAGTTTTTAACTTGGTTGTTTTCATTGTTATGGCAATTTGATTATGATTTGAGACCAGCCATTTTTCAATGCTTTGTGTGGTGGATGATTGCATATCGCCTCTATTATTTTGCTTACTGGTTACTCAGGCCATCTTTAATAGATCGTCCTTGGTGTAAAGTTTTAGCTATTAATGGATGTGGAAAAG

Coding sequences of Glyma.07G044300

Limit To All Plant Sequences

>Glyma.07g044300.1 sequence-type=CDS polypeptide=Glyma.07g044300.1.p locus=Glyma.07g044300 ID=Glyma.07g044300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGTGGTGGTGCGATTATCTCCGACTTCATTCCAGCGGGTCCCGCCGGCGGGGCGCAGCGCGTGACCGCCGACATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGTCGCTGCTGGACGATGATTTCGAGGCAGGGTTCAGAGAATTCGAGGATGACTCGGAAATCGAGGATGTCGATGATGAGGACGATGAAGAGGAGGAGGAGTTGAAGAAGAAGAAGCCCTTTGGGTTCTCTCGCTCCAACAACAAGGCTGCTTCTAAGCCTCTCTCTCGTGGAGCAACAACTGTGAAATCTGTGGAATCAAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAGTATCGCGGAATCCGCCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATTCGCGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTACGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGGCGCTGCTTCCTCAAAACGTCTCAAGGCGAATCCAGAGGCTCAGCCAATGAAGAAAAATCTGAACTCTGTGAAGCCGAAAATAAACCAGATGTTCAATTTTGGTGACAATCTTGAGGGCTACTACAGCCCTATAGATCAGGTGGAACAGAAACCACTGGTTAACCAGTATGTTAACCGTGCCCCGTTTGCTGGAAATGGAGTTCAAGTCTCACCTGTTACTCCATCTGCTGATGTTACTGCTTACTTCAGCTCTGAGCATTCGAGCAGCTCGTTTGATTATTCTGACCTCGGATGGGGTGAACAAGTCCCCAAGACACCCGAGATCTCATCCATGCTTTCTGCTGCTCCTTTGGACGGTGAATCTCAGTTTGTGCAGGGTGCTGCTGATCAGAATCAGAAGAAGAACAACCTGCTGGATATGGCATCTGTGCAAGATGATTCTGCAAAAACTCTTTCTGAGGAGCTTGCAGACATTGAATCCCAGCTGAAGTTCTTTGAGACCCCTTCTTTTCTTGATGAAGCCTGGGCTGATGCTGCATTGGCGTCTTTGCTCAGTGAAGATGCATCTCAGGATGCTGCTGGAAACCCTATGAACCTTTGGAGCTTCGACGACCTGCCTTCCATGGCAGGAGTCTTCTGA

>Glyma.07g044300.2 sequence-type=CDS polypeptide=Glyma.07g044300.2.p locus=Glyma.07g044300 ID=Glyma.07g044300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGTGGTGGTGCGATTATCTCCGACTTCATTCCAGCGGGTCCCGCCGGCGGGGCGCAGCGCGTGACCGCCGACATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGTCGCTGCTGGACGATGATTTCGAGGCAGGGTTCAGAGAATTCGAGGATGACTCGGAAATCGAGGATGTCGATGATGAGGACGATGAAGAGGAGGAGGAGTTGAAGAAGAAGAAGCCCTTTGGGTTCTCTCGCTCCAACAACAAGGCTGCTTCTAAGCCTCTCTCTCGTGGAGCAACAACTGTGAAATCTGTGGAATCAAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAGTATCGCGGAATCCGCCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATTCGCGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTACGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGGCGCTGCTTCCTCAAAACGTCTCAAGGCGAATCCAGAGGCTCAGCCAATGAAGAAAAATCTGAACTCTGTGAAGCCGAAAATAAACCAGATGTTCAATTTTGGTGACAATCTTGAGGGCTACTACAGCCCTATAGATCAGGTGGAACAGAAACCACTGGTTAACCAGTATGTTAACCGTGCCCCGTTTGCTGGAAATGGAGTTCAAGTCTCACCTGTTACTCCATCTGCTGATGTTACTGCTTACTTCAGCTCTGAGCATTCGAGCAGCTCGTTTGATTATTCTGACCTCGGATGGGGTGAACAAGTCCCCAAGACACCCGAGATCTCATCCATGCTTTCTGCTGCTCCTTTGGACGGTGAATCTCAGTTTGTGCAGGGTGCTGCTGATCAGAATCAGAAGAAGAACAACCTGCTGGATATGGCATCTGTGCAAGATGATTCTGCAAAAACTCTTTCTGAGGAGCTTGCAGACATTGAATCCCAGCTGAAGTTCTTTGAGACCCCTTCTTTTCTTGATGAAGCCTGGGCTGATGCTGCATTGGCGTCTTTGCTCAGTGAAGATGCATCTCAGGATGCTGCTGGAAACCCTATGAACCTTTGGAGCTTCGACGACCTGCCTTCCATGGCAGGAGTCTTCTGA

>Glyma.07g044300.3 sequence-type=CDS polypeptide=Glyma.07g044300.3.p locus=Glyma.07g044300 ID=Glyma.07g044300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGTGGTGGTGCGATTATCTCCGACTTCATTCCAGCGGGTCCCGCCGGCGGGGCGCAGCGCGTGACCGCCGACATCCTGTGGCCGAATTTGAGGAAGCGGTTCTCGAAGTCGCTGCTGGACGATGATTTCGAGGCAGGGTTCAGAGAATTCGAGGATGACTCGGAAATCGAGGATGTCGATGATGAGGACGATGAAGAGGAGGAGGAGTTGAAGAAGAAGAAGCCCTTTGGGTTCTCTCGCTCCAACAACAAGGCTGCTTCTAAGCCTCTCTCTCGTGGAGCAACAACTGTGAAATCTGTGGAATCAAAGGGGCAAGCTGAGAAGTGTGCCAAGAGAAAGAGGAAGAACCAGTATCGCGGAATCCGCCAGCGTCCATGGGGAAAGTGGGCTGCTGAGATTCGCGACCCAAGAAAGGGGGTTCGTGTTTGGCTTGGAACTTTCAGCACTGCTGAAGAAGCTGCAAGAGCTTACGATGCTGAAGCAAGGAGGATCCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGATGAGCCTTCAGGCGCTGCTTCCTCAAAACGTCTCAAGGCGAATCCAGAGGCTCAGCCAATGAAGAAAAATCTGAACTCTGTGAAGCCGAAAATAAACCAGATGTTCAATTTTGGTGACAATCTTGAGGGCTACTACAGCCCTATAGATCAGGTGGAACAGAAACCACTGGTTAACCAGTATGTTAACCGTGCCCCGTTTGCTGGAAATGGAGTTCAAGTCTCACCTGTTACTCCATCTGCTGATGTTACTGCTTACTTCAGCTCTGAGCATTCGAGCAGCTCGTTTGATTATTCTGACCTCGGATGGGGTGAACAAGTCCCCAAGACACCCGAGATCTCATCCATGCTTTCTGCTGCTCCTTTGGACGGTGAATCTCAGTTTGTGCAGGGTGCTGCTGATCAGAATCAGAAGAAGAACAACCTGCTGGATATGGCATCTGTGCAAGATGATTCTGCAAAAACTCTTTCTGAGGAGCTTGCAGACATTGAATCCCAGCTGAAGTTCTTTGAGACCCCTTCTTTTCTTGATGAAGCCTGGGCTGATGCTGCATTGGCGTCTTTGCTCAGTGAAGATGCATCTCAGGATGCTGCTGGAAACCCTATGAACCTTTGGAGCTTCGACGACCTGCCTTCCATGGCAGGAGTCTTCTGA

Predicted protein sequences of Glyma.07G044300

Limit To All Plant Sequences

>Glyma.07g044300.1.p sequence-type=predicted peptide transcript=Glyma.07g044300.1 locus=Glyma.07g044300 ID=Glyma.07g044300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MCGGAIISDFIPAGPAGGAQRVTADILWPNLRKRFSKSLLDDDFEAGFREFEDDSEIEDVDDEDDEEEEELKKKKPFGFSRSNNKAASKPLSRGATTVKSVESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGAASSKRLKANPEAQPMKKNLNSVKPKINQMFNFGDNLEGYYSPIDQVEQKPLVNQYVNRAPFAGNGVQVSPVTPSADVTAYFSSEHSSSSFDYSDLGWGEQVPKTPEISSMLSAAPLDGESQFVQGAADQNQKKNNLLDMASVQDDSAKTLSEELADIESQLKFFETPSFLDEAWADAALASLLSEDASQDAAGNPMNLWSFDDLPSMAGVF*

>Glyma.07g044300.2.p sequence-type=predicted peptide transcript=Glyma.07g044300.2 locus=Glyma.07g044300 ID=Glyma.07g044300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MCGGAIISDFIPAGPAGGAQRVTADILWPNLRKRFSKSLLDDDFEAGFREFEDDSEIEDVDDEDDEEEEELKKKKPFGFSRSNNKAASKPLSRGATTVKSVESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGAASSKRLKANPEAQPMKKNLNSVKPKINQMFNFGDNLEGYYSPIDQVEQKPLVNQYVNRAPFAGNGVQVSPVTPSADVTAYFSSEHSSSSFDYSDLGWGEQVPKTPEISSMLSAAPLDGESQFVQGAADQNQKKNNLLDMASVQDDSAKTLSEELADIESQLKFFETPSFLDEAWADAALASLLSEDASQDAAGNPMNLWSFDDLPSMAGVF*

>Glyma.07g044300.3.p sequence-type=predicted peptide transcript=Glyma.07g044300.3 locus=Glyma.07g044300 ID=Glyma.07g044300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MCGGAIISDFIPAGPAGGAQRVTADILWPNLRKRFSKSLLDDDFEAGFREFEDDSEIEDVDDEDDEEEEELKKKKPFGFSRSNNKAASKPLSRGATTVKSVESKGQAEKCAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPDEPSGAASSKRLKANPEAQPMKKNLNSVKPKINQMFNFGDNLEGYYSPIDQVEQKPLVNQYVNRAPFAGNGVQVSPVTPSADVTAYFSSEHSSSSFDYSDLGWGEQVPKTPEISSMLSAAPLDGESQFVQGAADQNQKKNNLLDMASVQDDSAKTLSEELADIESQLKFFETPSFLDEAWADAALASLLSEDASQDAAGNPMNLWSFDDLPSMAGVF*

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