Glyma.06g320100

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Report for Sequence Feature Glyma.06g320100

Feature Type:	gene_model
Chromosome:	Gm06
Start:	50874167
stop:	50888925
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.06g320100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G56290.1	AT	peroxin 5	JGI	N/A	IEA
GO:0016560	GO-bp	protein import into peroxisome matrix, docking	EnsemblGenomes	N/A	IEA
GO:0005778	GO-cc	peroxisomal membrane	EnsemblGenomes	N/A	IEA
GO:0005829	GO-cc	cytosol	EnsemblGenomes	N/A	IEA
GO:0005052	GO-mf	peroxisome matrix targeting signal-1 binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	EnsemblGenomes	N/A	IEA
GO:0005515	GO-mf	protein binding	JGI	N/A	IEA
KOG1125	KOG	TPR repeat-containing protein	JGI	N/A	IEA
PTHR10130	Panther	PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR (PEX5)	JGI	N/A	IEA
PTHR10130:SF0	Panther	PROTEIN PRX-5, ISOFORM A	JGI	N/A	IEA
PF00515	PFAM	Tetratricopeptide repeat	JGI	N/A	IEA

Expression Patterns of Glyma.06g320100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g320100 not represented in the dataset	Glyma.06g320100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.06g320100

Paralog	Evidence	Comments
Glyma.04g116700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.06g320100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma06g47821	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.06g320100

Limit To All Plant Sequences

>Glyma.06g320100.2 sequence-type=transcript locus=Glyma.06g320100 ID=Glyma.06g320100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGGAAGAAGGACAGAGACAGACCAAAGCAAACAAACAAAACAGCCACCGCCATTCCAATTCGAAGAAGAATAGTAGTTCAAGAGTTTGTTGGCAACCATGGCGATGCGCGACCTCGTTTCTGGTGCCGCGGCATGTGGCGACTCTTCTTCTTCTTCCTCAAACCCTCTCGCTTCCCTCGCCAACGCCCTTATTGGCTCTTCGTCCAAAACTCAGGAGAGGCTGAAGGAGATTCCCACATCCACTCCTACTGACCCTGCTTCCCAATTTTACTCCACAGCTCTCCCCGCCAATCAGCTTCCCGGCTCCGAATTCGATAAGCCTCTATTGAATTTAAACTCCCAGGCTTCGGAGTTTTTGCATAGGTTCCGTGGCTCCACTGGCCTTGAGGAGACATGGGATGAGATACAGCGTGATGGGGCGGCTGCCCAAATGCGCCAACTGCCACCGGGGATTCAACAGCCGCCGTTGGATGGGACACCGCAGAGAGTTCTATCAAACATTTTGCATTCATTTCTTGATAGCAGCCGTGGTGGAGTGCCTTTTCATCCTGCTCCACTTCCGATGTTGGGTTTATCTGAAGGTGATAAACAATGCATACGTGACCGCAGCAGCATAATGGCCAGGCATCTCTTTGTGGATAAAAGCGAAGAATTTATTGATGCCCAAGTAAATGCACTTCTATGCTCTCTAGATATTGACAGCAGTGTCCGTGGTAAGGGACCTATGCCTGAAAGATTTCGGGAGCTTGAGGATTACTGGAATGAGTCTCAAGGTAACCTGAGACTTGGTCCTCCTGCTCCAGACGGGTGGATTTCTGAATTTAGTCAACAAAGGGAGAAATATGATAATCCCGATTCATGGGCTAACTCATTTGAGCAACAGTATGGTGCAAATGGTTGGGTGTCTGAATTTGAACATTCCCAATTGTCATCAGTAGATCAAATGCGAGGTATGAACATGTCTAACTTTGCTGCAAGGGAGCAGACTCGTATGCTTGCAAACACGTTGGCCCAAAATGGTGACCCTAAATTTCAGAACTCAAAATTCCTTCAATTTGTGTCAAAGATGAGCCGTGGTGAGTTGATTATTGATGACAATCAAGTTAAAGAGAATGCATTACCTGCATCTGGAGATTGGGCAACAGAATACAATCAGCAATATAATCATGGTCATGCATGGGCTGGAGAATTTTTGAATGATAAGGTTTATCATGGACCTGATCAGTGGGCGAATGAATTTACAAGTGAAGGACGGCAGCATGATGCAGTTGATGATCAGTGGGTTAATGAATTCTCAAAGTTGAAAGTTAATGATTGGGCAGATGAATTTGGTCAGCAGTTTGGTGAAGGAGCCTTAGGGGATAGCACTTCTGATAGTTGGGCACAAGCATATGATGAGTTCCTAAATGAGCAAGTGGCTGCCAAGCAGCAGTTAGACAGTTCGAGGGGTGTGTATGTCTTTTCAGATTTAAATCCTTATGTTGGTCATCCAAATCCGCTAAAAGAAGGCCAAGATCTATTCAGAAAAGGACTTTTAAGTGAAGCAGTTCTAGCATTGGAAGCTGAAGTCCTAAAAAACCCTGAGAATGCTGAAGGGTGGAGACTGCTTGGAATAGCACATGCAGAGAATGATGATGATCAACAGGCTATTGCAGCAATGATGCGTGCACAGGAGGCTAACCCAACAAACCTGGAAGTGCTTCTTGCTCTTGGTGTTAGTCATACAAATGAACTGGAGCAAACAGCTGCTCTGAAGTATCTATATGGATGGTTGCGCCATCACCCAAAATATGGAACACTTGCCCCGCCTGAGATGGCTGATTCTTTGTACTATGCTGATGTTGCTAGGTTATTTAATGAAGCAGCTGAACTCTCACCTGATGACGCAGATGTCCACATAGTTCTAGGGGTCATGTACAACTTATCCAGAGAATATGACAAAGCCATTGCATCTTTTGAAAGAGCACTGAAACTTAAGCCGCAGGATTACTCTCTATGGAACAAGCTGGGTGCAACACAAGCAAACAGTGTTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCACTGGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAACCAGGGTATGTATGACGAGTCCATTCGATATTATGTTCGAGCACTTGCCATGAATCCAAAAGCAGAGAATGCATGGCAATATTTGAGAATTTCATTGAGCTGTGCTTCTAGGAATGACATGTTGGAAGCTTGTGATAGTCGTAATTTGGACCTTCTCCAGAAGGAGTTTCCACTACAGTAAGGGAGGGTCAGTTCCACTGTGGAGGTGGTTGCTTGAACATGAATCCTAATTTTCCTTAAAACTTTTGGATGAGTAAATGGCACATTTTCTGCCATTAAAGCTCGCAGTAGATGCCTGCTTCTATAGAAATTTCTTGGTGAAATGAAAGGCTGATCAAGTGACTAAGCCTGCAGGTGAATACGATGCATTATTCTAGCAATCTTTGAACATATGGTGTATATCATGAAAGTACATCAACCTGTTACACTGAATTTAGGCACAGTTACAGACTCCATTTCTTAATGTTACAAAAGCTATTTATCATAAAACAGCTGCAGTACTAAAGTTAAGGATTGTGGCTTCCATTATAAAGTTGAGTTTATTGTGTATGTACATATATATATACAGGTATACAAGATTAATCGCATATCATGTATCTAATTTGTTATATTATTACTTGATAATCAATAATCCATGTTTAAATTATCATAACTTAATTACTATCCTACTTTTCAGCCTTGGTTCATATTTTTTGGTGTGAATTGT

Coding sequences of Glyma.06g320100

Limit To All Plant Sequences

>Glyma.06g320100.1 sequence-type=CDS polypeptide=Glyma.06g320100.1.p locus=Glyma.06g320100 ID=Glyma.06g320100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGATGCGCGACCTCGTTTCTGGTGCCGCGGCATGTGGCGACTCTTCTTCTTCTTCCTCAAACCCTCTCGCTTCCCTCGCCAACGCCCTTATTGGCTCTTCGTCCAAAACTCAGGAGAGGCTGAAGGAGATTCCCACATCCACTCCTACTGACCCTGCTTCCCAATTTTACTCCACAGCTCTCCCCGCCAATCAGCTTCCCGGCTCCGAATTCGATAAGCCTCTATTGAATTTAAACTCCCAGGCTTCGGAGTTTTTGCATAGGTTCCGTGGCTCCACTGGCCTTGAGGAGACATGGGATGAGATACAGCGTGATGGGGCGGCTGCCCAAATGCGCCAACTGCCACCGGGGATTCAACAGCCGCCGTTGGATGGGACACCGCAGAGAGTTCTATCAAACATTTTGCATTCATTTCTTGATAGCAGCCGTGGTGGAGTGCCTTTTCATCCTGCTCCACTTCCGATGTTGGGTTTATCTGAAGGTGATAAACAATGCATACGTGACCGCAGCAGCATAATGGCCAGGCATCTCTTTGTGGATAAAAGCGAAGAATTTATTGATGCCCAAGTAAATGCACTTCTATGCTCTCTAGATATTGACAGCAGTGTCCGTGGTAAGGGACCTATGCCTGAAAGATTTCGGGAGCTTGAGGATTACTGGAATGAGTCTCAAGGTAACCTGAGACTTGGTCCTCCTGCTCCAGACGGGTGGATTTCTGAATTTAGTCAACAAAGGGAGAAATATGATAATCCCGATTCATGGGCTAACTCATTTGAGCAACAGTATGGTGCAAATGGTTGGGTGTCTGAATTTGAACATTCCCAATTGTCATCAGTAGATCAAATGCGAGGTATGAACATGTCTAACTTTGCTGCAAGGGAGCAGACTCGTATGCTTGCAAACACGTTGGCCCAAAATGGTGACCCTAAATTTCAGAACTCAAAATTCCTTCAATTTGTGTCAAAGATGAGCCGTGGTGAGTTGATTATTGATGACAATCAAGTTAAAGAGAATGCATTACCTGCATCTGGAGATTGGGCAACAGAATACAATCAGCAATATAATCATGGTCATGCATGGGCTGGAGAATTTTTGAATGATAAGGTTTATCATGGACCTGATCAGTGGGCGAATGAATTTACAAGTGAAGGACGGCAGCATGATGCAGTTGATGATCAGTGGGTTAATGAATTCTCAAAGTTGAAAGTTAATGATTGGGCAGATGAATTTGGTCAGCAGTTTGGTGAAGGAGCCTTAGGGGATAGCACTTCTGATAGTTGGGCACAAGCATATGATGAGTTCCTAAATGAGCAAGTGGCTGCCAAGCAGCAGTTAGACAGTTCGAGGGGTGTGTATGTCTTTTCAGATTTAAATCCTTATGTTGGTCATCCAAATCCGCTAAAAGAAGGCCAAGATCTATTCAGAAAAGGACTTTTAAGTGAAGCAGTTCTAGCATTGGAAGCTGAAGTCCTAAAAAACCCTGAGAATGCTGAAGGGTGGAGACTGCTTGGAATAGCACATGCAGAGAATGATGATGATCAACAGGCTATTGCAGCAATGATGCGTGCACAGGAGGCTAACCCAACAAACCTGGAAGTGCTTCTTGCTCTTGGTGTTAGTCATACAAATGAACTGGAGCAAACAGCTGCTCTGAAGTATCTATATGGATGGTTGCGCCATCACCCAAAATATGGAACACTTGCCCCGCCTGAGATGGCTGATTCTTTGTACTATGCTGATGTTGCTAGGTTATTTAATGAAGCAGCTGAACTCTCACCTGATGACGCAGATGTCCACATAGTTCTAGGGGTCATGTACAACTTATCCAGAGAATATGACAAAGCCATTGCATCTTTTGAAAGAGCACTGAAACTTAAGCCGCAGGATTACTCTCTATGGAACAAGCTGGGTGCAACACAAGCAAACAGTGTTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCACTGGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAACCAGGGTATGTATGACGAGTCCATTCGATATTATGTTCGAGCACTTGCCATGAATCCAAAAGCAGAGAATGCATGGCAATATTTGAGAATTTCATTGAGCTGTGCTTCTAGGAATGACATGTTGGAAGCTTGTGATAGTCGTAATTTGGACCTTCTCCAGAAGGAGTTTCCACTACAGTAA

>Glyma.06g320100.2 sequence-type=CDS polypeptide=Glyma.06g320100.2.p locus=Glyma.06g320100 ID=Glyma.06g320100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGATGCGCGACCTCGTTTCTGGTGCCGCGGCATGTGGCGACTCTTCTTCTTCTTCCTCAAACCCTCTCGCTTCCCTCGCCAACGCCCTTATTGGCTCTTCGTCCAAAACTCAGGAGAGGCTGAAGGAGATTCCCACATCCACTCCTACTGACCCTGCTTCCCAATTTTACTCCACAGCTCTCCCCGCCAATCAGCTTCCCGGCTCCGAATTCGATAAGCCTCTATTGAATTTAAACTCCCAGGCTTCGGAGTTTTTGCATAGGTTCCGTGGCTCCACTGGCCTTGAGGAGACATGGGATGAGATACAGCGTGATGGGGCGGCTGCCCAAATGCGCCAACTGCCACCGGGGATTCAACAGCCGCCGTTGGATGGGACACCGCAGAGAGTTCTATCAAACATTTTGCATTCATTTCTTGATAGCAGCCGTGGTGGAGTGCCTTTTCATCCTGCTCCACTTCCGATGTTGGGTTTATCTGAAGGTGATAAACAATGCATACGTGACCGCAGCAGCATAATGGCCAGGCATCTCTTTGTGGATAAAAGCGAAGAATTTATTGATGCCCAAGTAAATGCACTTCTATGCTCTCTAGATATTGACAGCAGTGTCCGTGGTAAGGGACCTATGCCTGAAAGATTTCGGGAGCTTGAGGATTACTGGAATGAGTCTCAAGGTAACCTGAGACTTGGTCCTCCTGCTCCAGACGGGTGGATTTCTGAATTTAGTCAACAAAGGGAGAAATATGATAATCCCGATTCATGGGCTAACTCATTTGAGCAACAGTATGGTGCAAATGGTTGGGTGTCTGAATTTGAACATTCCCAATTGTCATCAGTAGATCAAATGCGAGGTATGAACATGTCTAACTTTGCTGCAAGGGAGCAGACTCGTATGCTTGCAAACACGTTGGCCCAAAATGGTGACCCTAAATTTCAGAACTCAAAATTCCTTCAATTTGTGTCAAAGATGAGCCGTGGTGAGTTGATTATTGATGACAATCAAGTTAAAGAGAATGCATTACCTGCATCTGGAGATTGGGCAACAGAATACAATCAGCAATATAATCATGGTCATGCATGGGCTGGAGAATTTTTGAATGATAAGGTTTATCATGGACCTGATCAGTGGGCGAATGAATTTACAAGTGAAGGACGGCAGCATGATGCAGTTGATGATCAGTGGGTTAATGAATTCTCAAAGTTGAAAGTTAATGATTGGGCAGATGAATTTGGTCAGCAGTTTGGTGAAGGAGCCTTAGGGGATAGCACTTCTGATAGTTGGGCACAAGCATATGATGAGTTCCTAAATGAGCAAGTGGCTGCCAAGCAGCAGTTAGACAGTTCGAGGGGTGTGTATGTCTTTTCAGATTTAAATCCTTATGTTGGTCATCCAAATCCGCTAAAAGAAGGCCAAGATCTATTCAGAAAAGGACTTTTAAGTGAAGCAGTTCTAGCATTGGAAGCTGAAGTCCTAAAAAACCCTGAGAATGCTGAAGGGTGGAGACTGCTTGGAATAGCACATGCAGAGAATGATGATGATCAACAGGCTATTGCAGCAATGATGCGTGCACAGGAGGCTAACCCAACAAACCTGGAAGTGCTTCTTGCTCTTGGTGTTAGTCATACAAATGAACTGGAGCAAACAGCTGCTCTGAAGTATCTATATGGATGGTTGCGCCATCACCCAAAATATGGAACACTTGCCCCGCCTGAGATGGCTGATTCTTTGTACTATGCTGATGTTGCTAGGTTATTTAATGAAGCAGCTGAACTCTCACCTGATGACGCAGATGTCCACATAGTTCTAGGGGTCATGTACAACTTATCCAGAGAATATGACAAAGCCATTGCATCTTTTGAAAGAGCACTGAAACTTAAGCCGCAGGATTACTCTCTATGGAACAAGCTGGGTGCAACACAAGCAAACAGTGTTCAAAGTGCTGATGCAATAATGGCTTATCAACAGGCACTGGATTTAAAGCCTAATTATGTTCGTGCTTGGGCAAATATGGGTATCAGTTATGCAAACCAGGGTATGTATGACGAGTCCATTCGATATTATGTTCGAGCACTTGCCATGAATCCAAAAGCAGAGAATGCATGGCAATATTTGAGAATTTCATTGAGCTGTGCTTCTAGGAATGACATGTTGGAAGCTTGTGATAGTCGTAATTTGGACCTTCTCCAGAAGGAGTTTCCACTACAGTAA

Predicted protein sequences of Glyma.06g320100

Limit To All Plant Sequences

>Glyma.06g320100.1.p sequence-type=predicted peptide transcript=Glyma.06g320100.1 locus=Glyma.06g320100 ID=Glyma.06g320100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAMRDLVSGAAACGDSSSSSSNPLASLANALIGSSSKTQERLKEIPTSTPTDPASQFYSTALPANQLPGSEFDKPLLNLNSQASEFLHRFRGSTGLEETWDEIQRDGAAAQMRQLPPGIQQPPLDGTPQRVLSNILHSFLDSSRGGVPFHPAPLPMLGLSEGDKQCIRDRSSIMARHLFVDKSEEFIDAQVNALLCSLDIDSSVRGKGPMPERFRELEDYWNESQGNLRLGPPAPDGWISEFSQQREKYDNPDSWANSFEQQYGANGWVSEFEHSQLSSVDQMRGMNMSNFAAREQTRMLANTLAQNGDPKFQNSKFLQFVSKMSRGELIIDDNQVKENALPASGDWATEYNQQYNHGHAWAGEFLNDKVYHGPDQWANEFTSEGRQHDAVDDQWVNEFSKLKVNDWADEFGQQFGEGALGDSTSDSWAQAYDEFLNEQVAAKQQLDSSRGVYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEANPTNLEVLLALGVSHTNELEQTAALKYLYGWLRHHPKYGTLAPPEMADSLYYADVARLFNEAAELSPDDADVHIVLGVMYNLSREYDKAIASFERALKLKPQDYSLWNKLGATQANSVQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKAENAWQYLRISLSCASRNDMLEACDSRNLDLLQKEFPLQ*

>Glyma.06g320100.2.p sequence-type=predicted peptide transcript=Glyma.06g320100.2 locus=Glyma.06g320100 ID=Glyma.06g320100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAMRDLVSGAAACGDSSSSSSNPLASLANALIGSSSKTQERLKEIPTSTPTDPASQFYSTALPANQLPGSEFDKPLLNLNSQASEFLHRFRGSTGLEETWDEIQRDGAAAQMRQLPPGIQQPPLDGTPQRVLSNILHSFLDSSRGGVPFHPAPLPMLGLSEGDKQCIRDRSSIMARHLFVDKSEEFIDAQVNALLCSLDIDSSVRGKGPMPERFRELEDYWNESQGNLRLGPPAPDGWISEFSQQREKYDNPDSWANSFEQQYGANGWVSEFEHSQLSSVDQMRGMNMSNFAAREQTRMLANTLAQNGDPKFQNSKFLQFVSKMSRGELIIDDNQVKENALPASGDWATEYNQQYNHGHAWAGEFLNDKVYHGPDQWANEFTSEGRQHDAVDDQWVNEFSKLKVNDWADEFGQQFGEGALGDSTSDSWAQAYDEFLNEQVAAKQQLDSSRGVYVFSDLNPYVGHPNPLKEGQDLFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEANPTNLEVLLALGVSHTNELEQTAALKYLYGWLRHHPKYGTLAPPEMADSLYYADVARLFNEAAELSPDDADVHIVLGVMYNLSREYDKAIASFERALKLKPQDYSLWNKLGATQANSVQSADAIMAYQQALDLKPNYVRAWANMGISYANQGMYDESIRYYVRALAMNPKAENAWQYLRISLSCASRNDMLEACDSRNLDLLQKEFPLQ*

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