SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g290400

Feature Type:gene_model
Chromosome:Gm06
Start:47526775
stop:47533632
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g290400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G44280.1AT ATRING1A,RING1A JGI N/AIEA
6.3.2.19EC JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
K10695KEGG Chromosome and associated proteins JGI N/AIEA
KOG0311 KOG Predicted E3 ubiquitin ligase JGI N/AIEA
PTHR10825PantherFam RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT JGI N/AIEA
PF00097Pfam Zinc finger, C3HC4 type (RING finger) JGI N/AIEA

Gene model name correspondences to Glyma.06g290400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g44476 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g290400
>Glyma.06g290400.1 sequence-type=CDS polypeptide=Glyma.06g290400.1.p locus=Glyma.06g290400 id=Glyma.06g290400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCTCAGAAGCGTTCCTTCCCTGATGCTCCTAACGATAACAACCGCCACGCCAAACATCACCACGAAGAAGCAAAAACTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCACAACAACAACAACAGCATGATGAAGAAGAAGAAGAAGAGGATAATAATTACAAATCAGACGATTCTCCTCCCGAAGACAAATCCGAATATGTGTTTGTAGAACTTCTGGAAATACGCAAAGAAGTCCAATGTCCAATTTGCCTAGGTATTATTAAGAAAACACGTACTGTTATGGAATGCTTGCACCGGTTTTGCAGGGAATGCATTGACAAGTCGATGCGACTAGGGAACAATGAATGCCCTGCTTGTCGAACACACTGTGCCAGTCGTCGTTCTTTGAGAGATGATCCAAACTACGATGCCTTAATTGCAGCTTTATATCCTAATATTGAGAAGTATGAACAAGAGGAGCTTGAATTTCGTGAAGAGGACAAGAACCGCAATAAGCAGATTCAGGCTTCAATTGCAAAAGTTGTTCAACGACAATCTGAAGCACTGGTTAAGAGACGTAGAGATACACCAGGTTCATTTGTGACAAGATCACAGCGCAATCAACGAAATGTTCTCTCTAGGAGACAAAACCAAGGGATGGATAATCAAGGATCTGAAGATAATGAGGAGGAAAATGACAATAATGAAAAGGACTCATCTTCCACAGATGAGCGATGTACAGAACTCAGGCAGAGAAGGCGAAAGAGGCGGACCAGAGGTCGTCCTTCTCAGCCCTCATCATCGACGGCAAGTCCTGATGGTGGATGCATAGAAAGTGACATGGACATAAGAATTTCTTCTAGACTGGTGTCAAAACCTCAAAAACTAACTTGGGGAAGGGGTGGTTTTAGGAGTCACACACGGCATGGCAGTGGCAATGGTAGCAATAGCAAAAGTTCCCGCAGTAGTCGCTTGGCTAAGTTAGTTGATTATCTCCATAGCTTGAATGAAAACACTGATGAGTTAGATGTCCATCTCATTCTTTTGTCTTTAGACAAACAAATTACACCAAGCTTGCAGCAGCCACACCTTTGCTGTCGGCCAACATTGTCTGTGAAGCATCTTTGTGAATATGTTGCTCATCAGACACCTTTGCTGGTTGAAGAAGTTGAGATATTGGCAGTTAAAGGATGCTGCAGTACAGTTTGTGACAAGTCATTTGATGAGACTTCATCCTCTGATGAGCTAACTACGCTGGTTATAGATCCTAGCAAAGATGAACTGGAAACTCTGCAAGGGCATGAATCTCTGGCAGGGATTAAATCTAAATGCATATCTAAAAGGGAGCATTTGATTCTGGCATACAGGAGGAAGGAATGA
Predicted protein sequences of Glyma.06g290400
>Glyma.06g290400.1.p sequence-type=predicted peptide transcript=Glyma.06g290400.1 locus=Glyma.06g290400 id=Glyma.06g290400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAQKRSFPDAPNDNNRHAKHHHEEAKTEEEEEEEEEEAQQQQQHDEEEEEEDNNYKSDDSPPEDKSEYVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPNIEKYEQEELEFREEDKNRNKQIQASIAKVVQRQSEALVKRRRDTPGSFVTRSQRNQRNVLSRRQNQGMDNQGSEDNEEENDNNEKDSSSTDERCTELRQRRRKRRTRGRPSQPSSSTASPDGGCIESDMDIRISSRLVSKPQKLTWGRGGFRSHTRHGSGNGSNSKSSRSSRLAKLVDYLHSLNENTDELDVHLILLSLDKQITPSLQQPHLCCRPTLSVKHLCEYVAHQTPLLVEEVEILAVKGCCSTVCDKSFDETSSSDELTTLVIDPSKDELETLQGHESLAGIKSKCISKREHLILAYRRKE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo