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Report for Sequence Feature Glyma.06g272300

Feature Type:gene_model
Chromosome:Gm06
Start:46298753
stop:46300208
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g272300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G47890.1AT NADH-ubiquinone oxidoreductase B8 subunit, putative JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0005747GO-cc mitochondrial respiratory chain complex I EnsemblGenomesN/AIEA
GO:0008137GO-mf NADH dehydrogenase (ubiquinone) activity EnsemblGenomesN/AIEA
KOG3446 KOG NADH:ubiquinone oxidoreductase NDUFA2/B8 subunit JGI N/AIEA
PTHR12878Panther NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT JGI N/AIEA
PF05047PFAM Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain JGI N/AIEA

Expression Patterns of Glyma.06g272300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g272300 not represented in the dataset
Glyma.06g272300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.06g272300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g42425 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g272300
>Glyma.06g272300.1 sequence-type=CDS polypeptide=Glyma.06g272300.1.p locus=Glyma.06g272300 ID=Glyma.06g272300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGCCAGTCATCACCTGCAAGCTCACCCACAAGGGCTTTTGTGGAAAGGAATTATAAGGAACTAAAGACATTGAACCCAAAATTGCCCATATTAATCCGTGAGTGCAGTGGAGTTGAACCCCAATTATGGTCAAGATATGATTTGGGTGTTGAGAAAGGCATCAAATTGGAAGGCTTATTAGAGGCACAAATCTTTAAGGCACTTGAAGATTTGGTAAATATTTGA
Predicted protein sequences of Glyma.06g272300
>Glyma.06g272300.1.p sequence-type=predicted peptide transcript=Glyma.06g272300.1 locus=Glyma.06g272300 ID=Glyma.06g272300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MCQSSPASSPTRAFVERNYKELKTLNPKLPILIRECSGVEPQLWSRYDLGVEKGIKLEGLLEAQIFKALEDLVNI*






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