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Report for Sequence Feature Glyma.06g256800

Feature Type:gene_model
Chromosome:Gm06
Start:43909301
stop:43910382
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g256800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G07830.1AT glucuronidase 2 JGI N/AIEA
GO:0009505GO-cc plant-type cell wall EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016798GO-mf hydrolase activity, acting on glycosyl bonds EnsemblGenomesN/AIEA
GO:0016798GO-mf hydrolase activity, acting on glycosyl bonds JGI N/AIEA
PTHR14363Panther HEPARANASE-RELATED JGI N/AIEA
PTHR14363:SF7Panther HEPARANASE-LIKE PROTEIN 3 JGI N/AIEA
PF03662PFAM Glycosyl hydrolase family 79, N-terminal domain JGI N/AIEA
PWY-7213SoyCyc9 wogonin metabolism Plant Metabolic Network ISS
PWY-7214SoyCyc9 baicalein degradation (hydrogen peroxide detoxification) Plant Metabolic Network ISS
GN7V-54365SoyCyc9-rxn baicalin-β-D-glucuronidase Plant Metabolic Network ISS

Expression Patterns of Glyma.06g256800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g256800 not represented in the dataset
Glyma.06g256800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.06g256800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g40075 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g256800
>Glyma.06g256800.1 sequence-type=CDS polypeptide=Glyma.06g256800.1.p locus=Glyma.06g256800 ID=Glyma.06g256800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGTATTTGGACTTGAAGATCCCAATGGTAGTGATGAGCATCTTGAAAGGAAGATTCTAGATCTTGAGCGCTTGAGTAGGGTGGAATCAATTTTTGGCAATCTTTCAGAAACCATCAAAATATATGGTCCTTGGTCTTCTGCATGGGTAGGAGAAGCTGGAGGGGCATACAACAGTGGTGGCAATCATGTTTCTAACAGATTTCTAAACAGCTTTTGGTACTTAGATCAACTTGGAATAGCATCCTGCTACAACACTAAAGTCTATTGCAGGCAGACTTTAATTGGAGGGAATTATGGCCTTCTCAATGCCACCACCTTTGCTCCCAATCCTGACTACTACAGGTAA
Predicted protein sequences of Glyma.06g256800
>Glyma.06g256800.1.p sequence-type=predicted peptide transcript=Glyma.06g256800.1 locus=Glyma.06g256800 ID=Glyma.06g256800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVFGLEDPNGSDEHLERKILDLERLSRVESIFGNLSETIKIYGPWSSAWVGEAGGAYNSGGNHVSNRFLNSFWYLDQLGIASCYNTKVYCRQTLIGGNYGLLNATTFAPNPDYYR*






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