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Report for Sequence Feature Glyma.06g254200

Feature Type:gene_model
Chromosome:Gm06
Start:42644161
stop:42649221
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g254200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G35590.1AT PAA1 JGI N/AIEA
3.4.25.1EC proteasome endopeptidase complex JGI N/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process JGI N/AIEA
GO:0051603GO-bp proteolysis involved in cellular protein catabolic process JGI N/AIEA
GO:0005839GO-cc proteasome core complex JGI N/AIEA
GO:0019773GO-cc proteasome core complex, alpha-subunit complex JGI N/AIEA
GO:0004175GO-mf endopeptidase activity JGI N/AIEA
GO:0004298GO-mf threonine-type endopeptidase activity JGI N/AIEA
K02730KEGG Proteasome JGI N/AIEA
KOG0182 KOG 20S proteasome, regulatory subunit alpha type PSMA6/SCL1 JGI N/AIEA
PTHR11599PantherFam PROTEASOME SUBUNIT ALPHA/BETA JGI N/AIEA
PTHR11599:SF11PantherFam PROTEASOME SUBUNIT ALPHA TYPE-6 JGI N/AIEA
PF00227Pfam Proteasome subunit JGI N/AIEA
PF10584Pfam Proteasome subunit A N-terminal signature JGI N/AIEA

Proteins Associated with Glyma.06g254200
LocusGene SymbolProtein Name
PAA1 proteasome subunit alpha type-6

Gene model name correspondences to Glyma.06g254200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g39710 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g254200
>Glyma.06g254200.1 sequence-type=CDS polypeptide=Glyma.06g254200.1.p locus=Glyma.06g254200 id=Glyma.06g254200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGTCGAGGAAGTGGAGGTGGATACGATCGTCACATCACTATTTTCTCCCCTGAAGGACGTCTCTTTCAAGTGGAGTATGCTTTCAAGGCTGTGAAGGCTGCAGGAATCACCTCGATTGGTGTCCGAGGAAAGGATTCAATTTGTGTCGTTACTCAGAAGAAGGTTCCGGATAAGCTTTTGGACAACACAAGTGTTACACACCTCTTTCCAATCACCAAGTACCTTGGATTATTGGCTACTGGCATGACAGCTGATGCTAGGACACTGGTCCAACAAGCAAGAAATGAAGCAGCTGAGTTTCGCTTTACATATGGATATGAGATGCCTGTAGATGTATTAGCTAAATGGATTGCAGATAAATCACAAGTCTATACTCAACATGCTTATATGAGACCACTCGGAGTAGTTGCTATGGTTTTGGGTATTGATGATGAATATGGACCTCAGCTATACAAATGTGATCCAGCTGGTCATTACTTTGGTCACAAGGCAACAAGTGCTGGATTGAAGGACCAAGAGGCAATTAATTTCTTGGAAAAGAAGATGAAGAATGACCCTTCATTTACATATGAGGAGACGGTTCAGACTGCCATTTCTGCCCTGCAATCAGTTCTTCAGGAGGATTTTAAGGCCACTGAGATTGAGGTTGGAGTGGTGCGGAAGGATAATCCAGAATTCAGAGTTTTAACCACCGACGAAATTGATGAGCACTTGACTGCAATAAGTGAGCGTGACTGA
Predicted protein sequences of Glyma.06g254200
>Glyma.06g254200.1.p sequence-type=predicted peptide transcript=Glyma.06g254200.1 locus=Glyma.06g254200 id=Glyma.06g254200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLTAISERD*






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