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Report for Sequence Feature Glyma.06g252400

Feature Type:gene_model
Chromosome:Gm06
Start:42875314
stop:42878412
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g252400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G15530.5AT pyruvate orthophosphate dikinase JGI N/AIEA
GO:0006090GO-bp pyruvate metabolic process EnsemblGenomesN/AIEA
GO:0016310GO-bp phosphorylation EnsemblGenomesN/AIEA
GO:0016310GO-bp phosphorylation JGI N/AIEA
GO:0003824GO-mf catalytic activity EnsemblGenomesN/AIEA
GO:0016772GO-mf transferase activity, transferring phosphorus-containing groups EnsemblGenomesN/AIEA
GO:0016772GO-mf transferase activity, transferring phosphorus-containing groups JGI N/AIEA
GO:0050242GO-mf pyruvate, phosphate dikinase activity EnsemblGenomesN/AIEA
PTHR22931Panther PHOSPHOENOLPYRUVATE DIKINASE-RELATED JGI N/AIEA
PTHR22931:SF9Panther PYRUVATE, PHOSPHATE DIKINASE 1, CHLOROPLASTIC JGI N/AIEA
PF02896PFAM PEP-utilising enzyme, TIM barrel domain JGI N/AIEA
PWY-6549SoyCyc9 L-glutamine biosynthesis III Plant Metabolic Network ISS
GN7V-49935SoyCyc9-rxn pyruvate, phosphate dikinase Plant Metabolic Network ISS

Expression Patterns of Glyma.06g252400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g252400 not represented in the dataset
Glyma.06g252400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.06g252400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g39232 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g252400
>Glyma.06g252400.1 sequence-type=CDS polypeptide=Glyma.06g252400.1.p locus=Glyma.06g252400 ID=Glyma.06g252400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGTTTGAATGACCTACTTGCACTTGGCGGTGGGGCTGCTTGGTTAACGTTGCACAAGCTCAATCTGCAAACACCACCACTGATCCTTCCGAAGGAATTAAGGCATCAAGTGAATTTAATAAGGAATGTTGCTGATAAAGTGTTGTCTGAGATGGGTTCTTCTTTAAGCTATAAGGTTCGAACTATGATTGAAGTTCCAAGGGATGCACTAGTTGCAGATGAGATTGCAAAGGAAGCAGAGTTCTTTTCGTTTGGAACCAATGACCTTTGTCAGCAGAATCTTGGGGTTTAA
Predicted protein sequences of Glyma.06g252400
>Glyma.06g252400.1.p sequence-type=predicted peptide transcript=Glyma.06g252400.1 locus=Glyma.06g252400 ID=Glyma.06g252400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MCLNDLLALGGGAAWLTLHKLNLQTPPLILPKELRHQVNLIRNVADKVLSEMGSSLSYKVRTMIEVPRDALVADEIAKEAEFFSFGTNDLCQQNLGV*






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