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Report for Sequence Feature Glyma.06g234300

Feature Type:gene_model
Chromosome:Gm06
Start:37670482
stop:37677211
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g234300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G53190.1AT RING/U-box superfamily protein JGI N/AIEA
AT3G15070.1AT RING/U-box superfamily protein JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
PTHR14155Panther RING FINGER DOMAIN-CONTAINING JGI N/AIEA
PTHR14155:SF18Panther JGI N/AIEA
PF00097PFAM Zinc finger, C3HC4 type (RING finger) JGI N/AIEA

Expression Patterns of Glyma.06g234300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.06g234300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g34970 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.06g234300
>Glyma.06g234300.2 sequence-type=transcript locus=Glyma.06g234300 ID=Glyma.06g234300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TAGAAGTCTCGCTTATTAAACTTTCTCTTACCCATTCGGACTTCTCTCTCTCCTTCCCTGCGTTTAATAGCTGTACTTTGCTTCTTTCTTTCTTTATCCGCTCCTtcatcttcatcatcatcatcatcatcaccatcatcattatcatTCTTCAATTCTCGCAAAAAAATTCGCTACTTTCGTTGCGATCGTTTCCAATTTCATGCGCTTTCTTGTGTGGGGTGGATTGGTGGTGGGTTGGTTGATTTTAGGTTTGGGAAAAAACGCGTGACTTTGATGATTACGAGGATTAAATTGCATCAACAAGTCTCTATGATATGGATCAAATGAGTCAGCAAAGGCATGGCTATTTTCATTCCGAAAGTATCCATTTCAGAGGCAGCAACATCTCTCCGCCTAATGTATGCACACTCGTGACAGCCTCAGGGCACGGAACTAATCTAGATTCCCATTATTTACTAGATGCTTATGACAATGGTATGATGTATGGAATGACACAATACAATGGAGTTCAACATCAACATAATCTTGATATGGGTGTTCCAGCTGCTGCCAACATATATTATTCTAGCATGAATCCTTCATCTGGTACAGCTGCATCTCTAAATGCTGAAGTTAGGAGAGGAAATTATCAATATTTCAATGCCTCGGCTAGTTCTACAGTTGCTCCCCCTAACGCAAGACACACTGAAAATGGCATCCCCTCACTACCACATTGTACTTCGTGGAGCAGATCAGGCGAGTCTATGATGGTGCGTGACCCTAACCGTATAACTCAAGGAAATTATTTAAGTCAACACTTTCAACCAGCAGCTCCTCCTCCCTGGCTGGACCAGCAGTTGAATAGCAATAATAATGATGGTCATGCTTTGCCTTGGCATCAGTCTCTTCCAATGCCATATGTACAAGCTCCCAGTGCTAATGGAAGTTCATTAGAGAATGCAAGAATGGGTCCTCAGAGATATCATGATACAGCTGGCAGCAGAAGTGGCCACAGATTTCCTCATCCTCCTCTTGTCAACCCACACTATCATAGCTTTCATCATCAAACACAGCCTGTGCAAGAAATGAGAGGTCACTCCATCAACTTTCACCCCCCTCCTCCAGTAACTGCACCTTCATATAGAGTTCCAACAAATGCATCACGAAGTTCTTCGATCTTCATACAAGATGCTATTGAGATGGGTGCTAGGCATGTTGGCGCTGCACCATTTGCTGGTTCACGTATATACCGACCCCATAGGGGCAGCATGCATGAGACTACTCTTAGACATCGAAATCTTCCTCCCGTGACCTTTCTCCAAGTTGATGACGTTACTTTACTGGTTGACCATCATAATGATATGCGCTTGGACATTGAGGATATGTCTTATGAGGAGCTTCTTGCATTAGGGGAGCGGATTGGCAAAGTAAACACAGGTTTGTCAGAGGAAATGATTACAAGTCAAATGAAGACAAAATCTTATTTATTACTAGCTACTAATGCTATTAACTTGGAGGAGGCAGCTTCCGAGGAACAGGAAACTGATTCTTGCATAATATGCCAGGATGAATATAAAAACCAAGAAAAAATTGGTATTCTTCAATGCGGGCACGAATATCACGCAGACTGTTTAAAGAAATGGTTACTTGTGAAAAATGTGTGCCCCGTATGCAAATCAGAAGCATTGACTCCTGGAGAGAAGTGTGTATAAAATCTGAGATTTACATGTCTCTGTTCCTACATGCACACTTCTTAGCTACTACATTTTTCTAACGATTTCATGTTTTGTTGTGTATATGAACCCGTACATATAGACAGTCGCATTGTCCAACTCATTTATTTGTTGGCATCAAAACATTGTATGTATCAAGTTGTACAGACTTCTGTTGATATATTAACTTTAGGCAATTACATTGTTGCTATTTTTTATTTTCATTTTTTATATGGATGGTTGAATGTGCCATGTCCAAGTATAGAATGAAACTTTATGTTTTATTCATGTAGTTGACAG

>Glyma.06g234300.3 sequence-type=transcript locus=Glyma.06g234300 ID=Glyma.06g234300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
TAGAAGTCTCGCTTATTAAACTTTCTCTTACCCATTCGGACTTCTCTCTCTCCTTCCCTGCGTTTAATAGCTGTACTTTGCTTCTTTCTTTCTTTATCCGCTCCTtcatcttcatcatcatcatcatcatcaccatcatcattatcatTCTTCAATTCTCGCAAAAAAATTCGCTACTTTCGTTGCGATCGTTTCCAATTTCATGCGCTTTCTTGTGTGGGGTGGATTGGTGGTGGGTTGGTTGATTTTAGGTTTGGGAAAAAACGCGTGACTTTGATGATTACGAGATTTTCTTTACATGGTTTTAAGCTTTTAATGACTTTCCTAGTGACTATTTTATTCACTCTGGTTGGTACATTAGGATTAAATTGCATCAACAAGTCTCTATGATATGGATCAAATGAGTCAGCAAAGGCATGGCTATTTTCATTCCGAAAGTATCCATTTCAGAGGCAGCAACATCTCTCCGCCTAATGTATGCACACTCGTGACAGCCTCAGGGCACGGAACTAATCTAGATTCCCATTATTTACTAGATGCTTATGACAATGGTATGATGTATGGAATGACACAATACAATGGAGTTCAACATCAACATAATCTTGATATGGGTGTTCCAGCTGCTGCCAACATATATTATTCTAGCATGAATCCTTCATCTGGTACAGCTGCATCTCTAAATGCTGAAGTTAGGAGAGGAAATTATCAATATTTCAATGCCTCGGCTAGTTCTACAGTTGCTCCCCCTAACGCAAGACACACTGAAAATGGCATCCCCTCACTACCACATTGTACTTCGTGGAGCAGATCAGGCGAGTCTATGATGGTGCGTGACCCTAACCGTATAACTCAAGGAAATTATTTAAGTCAACACTTTCAACCAGCAGCTCCTCCTCCCTGGCTGGACCAGCAGTTGAATAGCAATAATAATGATGGTCATGCTTTGCCTTGGCATCAGTCTCTTCCAATGCCATATGTACAAGCTCCCAGTGCTAATGGAAGTTCATTAGAGAATGCAAGAATGGGTCCTCAGAGATATCATGATACAGCTGGCAGCAGAAGTGGCCACAGATTTCCTCATCCTCCTCTTGTCAACCCACACTATCATAGCTTTCATCATCAAACACAGCCTGTGCAAGAAATGAGAGGTCACTCCATCAACTTTCACCCCCCTCCTCCAGTAACTGCACCTTCATATAGAGTTCCAACAAATGCATCACGAAGTTCTTCGATCTTCATACAAGATGCTATTGAGATGGGTGCTAGGCATGTTGGCGCTGCACCATTTGCTGGTTCACGTATATACCGACCCCATAGGGGCAGCATGCATGAGACTACTCTTAGACATCGAAATCTTCCTCCCGTGACCTTTCTCCAAGTTGATGTAATGTTTCCTATTTCTCTTTGTACAGCTTTTGGTACTCCATAGGACTATATGTAGATAACCTACTTTTTTTACAT
Coding sequences of Glyma.06g234300
>Glyma.06g234300.1 sequence-type=CDS polypeptide=Glyma.06g234300.1.p locus=Glyma.06g234300 ID=Glyma.06g234300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATCAAATGAGTCAGCAAAGGCATGGCTATTTTCATTCCGAAAGTATCCATTTCAGAGGCAGCAACATCTCTCCGCCTAATGTATGCACACTCGTGACAGCCTCAGGGCACGGAACTAATCTAGATTCCCATTATTTACTAGATGCTTATGACAATGGTATGATGTATGGAATGACACAATACAATGGAGTTCAACATCAACATAATCTTGATATGGGTGTTCCAGCTGCTGCCAACATATATTATTCTAGCATGAATCCTTCATCTGGTACAGCTGCATCTCTAAATGCTGAAGTTAGGAGAGGAAATTATCAATATTTCAATGCCTCGGCTAGTTCTACAGTTGCTCCCCCTAACGCAAGACACACTGAAAATGGCATCCCCTCACTACCACATTGTACTTCGTGGAGCAGATCAGGCGAGTCTATGATGGTGCGTGACCCTAACCGTATAACTCAAGGAAATTATTTAAGTCAACACTTTCAACCAGCAGCTCCTCCTCCCTGGCTGGACCAGCAGTTGAATAGCAATAATAATGATGGTCATGCTTTGCCTTGGCATCAGTCTCTTCCAATGCCATATGTACAAGCTCCCAGTGCTAATGGAAGTTCATTAGAGAATGCAAGAATGGGTCCTCAGAGATATCATGATACAGCTGGCAGCAGAAGTGGCCACAGATTTCCTCATCCTCCTCTTGTCAACCCACACTATCATAGCTTTCATCATCAAACACAGCCTGTGCAAGAAATGAGAGGTCACTCCATCAACTTTCACCCCCCTCCTCCAGTAACTGCACCTTCATATAGAGTTCCAACAAATGCATCACGAAGTTCTTCGATCTTCATACAAGATGCTATTGAGATGGGTGCTAGGCATGTTGGCGCTGCACCATTTGCTGGTTCACGTATATACCGACCCCATAGGGGCAGCATGCATGAGACTACTCTTAGACATCGAAATCTTCCTCCCGTGACCTTTCTCCAAGTTGATGACGTTACTTTACTGGTTGACCATCATAATGATATGCGCTTGGACATTGAGGATATGTCTTATGAGGAGCTTCTTGCATTAGGGGAGCGGATTGGCAAAGTAAACACAGGTTTGTCAGAGGAAATGATTACAAGTCAAATGAAGACAAAATCTTATTTATTACTAGCTACTAATGCTATTAACTTGGAGGAGGCAGCTTCCGAGGAACAGGAAACTGATTCTTGCATAATATGCCAGGATGAATATAAAAACCAAGAAAAAATTGGTATTCTTCAATGCGGGCACGAATATCACGCAGACTGTTTAAAGAAATGGTTACTTGTGAAAAATGTGTGCCCCGTATGCAAATCAGAAGCATTGACTCCTGGAGAGAAGTGTGTATAA

>Glyma.06g234300.2 sequence-type=CDS polypeptide=Glyma.06g234300.2.p locus=Glyma.06g234300 ID=Glyma.06g234300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATCAAATGAGTCAGCAAAGGCATGGCTATTTTCATTCCGAAAGTATCCATTTCAGAGGCAGCAACATCTCTCCGCCTAATGTATGCACACTCGTGACAGCCTCAGGGCACGGAACTAATCTAGATTCCCATTATTTACTAGATGCTTATGACAATGGTATGATGTATGGAATGACACAATACAATGGAGTTCAACATCAACATAATCTTGATATGGGTGTTCCAGCTGCTGCCAACATATATTATTCTAGCATGAATCCTTCATCTGGTACAGCTGCATCTCTAAATGCTGAAGTTAGGAGAGGAAATTATCAATATTTCAATGCCTCGGCTAGTTCTACAGTTGCTCCCCCTAACGCAAGACACACTGAAAATGGCATCCCCTCACTACCACATTGTACTTCGTGGAGCAGATCAGGCGAGTCTATGATGGTGCGTGACCCTAACCGTATAACTCAAGGAAATTATTTAAGTCAACACTTTCAACCAGCAGCTCCTCCTCCCTGGCTGGACCAGCAGTTGAATAGCAATAATAATGATGGTCATGCTTTGCCTTGGCATCAGTCTCTTCCAATGCCATATGTACAAGCTCCCAGTGCTAATGGAAGTTCATTAGAGAATGCAAGAATGGGTCCTCAGAGATATCATGATACAGCTGGCAGCAGAAGTGGCCACAGATTTCCTCATCCTCCTCTTGTCAACCCACACTATCATAGCTTTCATCATCAAACACAGCCTGTGCAAGAAATGAGAGGTCACTCCATCAACTTTCACCCCCCTCCTCCAGTAACTGCACCTTCATATAGAGTTCCAACAAATGCATCACGAAGTTCTTCGATCTTCATACAAGATGCTATTGAGATGGGTGCTAGGCATGTTGGCGCTGCACCATTTGCTGGTTCACGTATATACCGACCCCATAGGGGCAGCATGCATGAGACTACTCTTAGACATCGAAATCTTCCTCCCGTGACCTTTCTCCAAGTTGATGACGTTACTTTACTGGTTGACCATCATAATGATATGCGCTTGGACATTGAGGATATGTCTTATGAGGAGCTTCTTGCATTAGGGGAGCGGATTGGCAAAGTAAACACAGGTTTGTCAGAGGAAATGATTACAAGTCAAATGAAGACAAAATCTTATTTATTACTAGCTACTAATGCTATTAACTTGGAGGAGGCAGCTTCCGAGGAACAGGAAACTGATTCTTGCATAATATGCCAGGATGAATATAAAAACCAAGAAAAAATTGGTATTCTTCAATGCGGGCACGAATATCACGCAGACTGTTTAAAGAAATGGTTACTTGTGAAAAATGTGTGCCCCGTATGCAAATCAGAAGCATTGACTCCTGGAGAGAAGTGTGTATAA

>Glyma.06g234300.3 sequence-type=CDS polypeptide=Glyma.06g234300.3.p locus=Glyma.06g234300 ID=Glyma.06g234300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATCAAATGAGTCAGCAAAGGCATGGCTATTTTCATTCCGAAAGTATCCATTTCAGAGGCAGCAACATCTCTCCGCCTAATGTATGCACACTCGTGACAGCCTCAGGGCACGGAACTAATCTAGATTCCCATTATTTACTAGATGCTTATGACAATGGTATGATGTATGGAATGACACAATACAATGGAGTTCAACATCAACATAATCTTGATATGGGTGTTCCAGCTGCTGCCAACATATATTATTCTAGCATGAATCCTTCATCTGGTACAGCTGCATCTCTAAATGCTGAAGTTAGGAGAGGAAATTATCAATATTTCAATGCCTCGGCTAGTTCTACAGTTGCTCCCCCTAACGCAAGACACACTGAAAATGGCATCCCCTCACTACCACATTGTACTTCGTGGAGCAGATCAGGCGAGTCTATGATGGTGCGTGACCCTAACCGTATAACTCAAGGAAATTATTTAAGTCAACACTTTCAACCAGCAGCTCCTCCTCCCTGGCTGGACCAGCAGTTGAATAGCAATAATAATGATGGTCATGCTTTGCCTTGGCATCAGTCTCTTCCAATGCCATATGTACAAGCTCCCAGTGCTAATGGAAGTTCATTAGAGAATGCAAGAATGGGTCCTCAGAGATATCATGATACAGCTGGCAGCAGAAGTGGCCACAGATTTCCTCATCCTCCTCTTGTCAACCCACACTATCATAGCTTTCATCATCAAACACAGCCTGTGCAAGAAATGAGAGGTCACTCCATCAACTTTCACCCCCCTCCTCCAGTAACTGCACCTTCATATAGAGTTCCAACAAATGCATCACGAAGTTCTTCGATCTTCATACAAGATGCTATTGAGATGGGTGCTAGGCATGTTGGCGCTGCACCATTTGCTGGTTCACGTATATACCGACCCCATAGGGGCAGCATGCATGAGACTACTCTTAGACATCGAAATCTTCCTCCCGTGACCTTTCTCCAAGTTGATGTAATGTTTCCTATTTCTCTTTGTACAGCTTTTGGTACTCCATAG
Predicted protein sequences of Glyma.06g234300
>Glyma.06g234300.1.p sequence-type=predicted peptide transcript=Glyma.06g234300.1 locus=Glyma.06g234300 ID=Glyma.06g234300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDQMSQQRHGYFHSESIHFRGSNISPPNVCTLVTASGHGTNLDSHYLLDAYDNGMMYGMTQYNGVQHQHNLDMGVPAAANIYYSSMNPSSGTAASLNAEVRRGNYQYFNASASSTVAPPNARHTENGIPSLPHCTSWSRSGESMMVRDPNRITQGNYLSQHFQPAAPPPWLDQQLNSNNNDGHALPWHQSLPMPYVQAPSANGSSLENARMGPQRYHDTAGSRSGHRFPHPPLVNPHYHSFHHQTQPVQEMRGHSINFHPPPPVTAPSYRVPTNASRSSSIFIQDAIEMGARHVGAAPFAGSRIYRPHRGSMHETTLRHRNLPPVTFLQVDDVTLLVDHHNDMRLDIEDMSYEELLALGERIGKVNTGLSEEMITSQMKTKSYLLLATNAINLEEAASEEQETDSCIICQDEYKNQEKIGILQCGHEYHADCLKKWLLVKNVCPVCKSEALTPGEKCV*

>Glyma.06g234300.2.p sequence-type=predicted peptide transcript=Glyma.06g234300.2 locus=Glyma.06g234300 ID=Glyma.06g234300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDQMSQQRHGYFHSESIHFRGSNISPPNVCTLVTASGHGTNLDSHYLLDAYDNGMMYGMTQYNGVQHQHNLDMGVPAAANIYYSSMNPSSGTAASLNAEVRRGNYQYFNASASSTVAPPNARHTENGIPSLPHCTSWSRSGESMMVRDPNRITQGNYLSQHFQPAAPPPWLDQQLNSNNNDGHALPWHQSLPMPYVQAPSANGSSLENARMGPQRYHDTAGSRSGHRFPHPPLVNPHYHSFHHQTQPVQEMRGHSINFHPPPPVTAPSYRVPTNASRSSSIFIQDAIEMGARHVGAAPFAGSRIYRPHRGSMHETTLRHRNLPPVTFLQVDDVTLLVDHHNDMRLDIEDMSYEELLALGERIGKVNTGLSEEMITSQMKTKSYLLLATNAINLEEAASEEQETDSCIICQDEYKNQEKIGILQCGHEYHADCLKKWLLVKNVCPVCKSEALTPGEKCV*

>Glyma.06g234300.3.p sequence-type=predicted peptide transcript=Glyma.06g234300.3 locus=Glyma.06g234300 ID=Glyma.06g234300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDQMSQQRHGYFHSESIHFRGSNISPPNVCTLVTASGHGTNLDSHYLLDAYDNGMMYGMTQYNGVQHQHNLDMGVPAAANIYYSSMNPSSGTAASLNAEVRRGNYQYFNASASSTVAPPNARHTENGIPSLPHCTSWSRSGESMMVRDPNRITQGNYLSQHFQPAAPPPWLDQQLNSNNNDGHALPWHQSLPMPYVQAPSANGSSLENARMGPQRYHDTAGSRSGHRFPHPPLVNPHYHSFHHQTQPVQEMRGHSINFHPPPPVTAPSYRVPTNASRSSSIFIQDAIEMGARHVGAAPFAGSRIYRPHRGSMHETTLRHRNLPPVTFLQVDVMFPISLCTAFGTP*






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