SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g231000

Feature Type:gene_model
Chromosome:Gm06
Start:35453810
stop:35458929
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g231000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G15010.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K12741KEGG Spliceosome JGI N/AIEA
KOG0130 KOG RNA-binding protein RBM8/Tsunagi (RRM superfamily) JGI N/AIEA
KOG0131 KOG Splicing factor 3b, subunit 4 JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF14259Pfam JGI N/AIEA

Gene model name correspondences to Glyma.06g231000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g33940 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g231000
>Glyma.06g231000.2 sequence-type=CDS polypeptide=Glyma.06g231000.2.p locus=Glyma.06g231000 id=Glyma.06g231000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCAACCAAGAAGCGCAAGCTCGACGAGAACGGCTTCAACAACAACGACTCTTCCGACCCCCTCAAGCTCTCCCCCTCCGAAGTCCGCAAGCTCATCGAGCGCTTCACCTCCGACCAGCTCCTCGACATCCTCCAGGACGCGGTGGCGCGCCACCTCGACGTCCTTGCCGCCGTGCGCGCCGTCGCGGACCCTGACGTCTCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCACCACCGACGGCCTCCGCTCGCTCTTCTCCACCTTCGGCGACCTCGAGGAGGCCGTTGTCATCCTCGACAAGGCCACTGGCAAGTCCAAGGGATACGGCTTCGTCACCTTCCGCCACGTCGACGGCGCGCTTCTCGCCCTCCGCGAGCCCAGCAAGCGCATCGACGGCCGCGTGACGGTCACGCAGCTCGCCGCCGCCGGGAACTCCGCGTCGAACGTCAACCCCGCTGACGTAGCTCTCCGTAAGATCTACGTCGCCAACGTGCCGCCGGACCTGCCCGCGGACAAGCTTCTCGCGCACTTCTCCGTGTACGGCGAAATCGAAGAAGGTCCGTTAGGGTTTGATAAACAAACAGGAAAGTCGAAAGGGTTTGCTTTATTTGTTTATAAGTCTCCCGAGGGTGCTCAGGCCGCATTGATAGATCCTGTGAAGACTGTGGAAGGGAGGCAGTTGAGTTGTAAGTTGGCGATTACTGATGGGAAGCAGGGAAAGCGGGTAGGGCCGGACTCGGCCCAGGCCCATCACGGGAATGTTCAGCACGGGCATGGAGATGGAGTGGGGGCGGGAATGGGGATGCCTCCTAATGCGGGGTCCGGGCCTGGGCAGTATGGTGGACCTGGACAGTATGGGCCCCCGGTTGGGATGGGTTCTTATGGTGGGTTTGGCGGACAGCCTCCGATGGGCAATCATAACCATCCTCTTAATTCGACGAATCCTGTGCCGGGTTCTTTGGCAGGTGCTGGTGGGTATGGTGGTGGGATGGGTGGGCCATATGGTGGGTACGGTGGTGGACCTGGACCGGGGTCGACTGGCTTTGGCGGTGCTGGTGGGATGGGAGGAGGTGGTGGAGGTGTTGGTGGTGGCGCTGGTGGCGGGCTTGGTGGTGCTGGTGGTGGTAGTTCTATGTATAGATTGCCGGGTTCGGGCGGAATGCCTGCTGGTGGTACTGGAGGGTATCCGGATAGTGGACACTATGGTTTATCAGCTTCCTCTGGGTACCAGAATCAGCATCACCCTCCTTCTGGAACTTCACCTATGCCTAGGGTTCCGCCTGGTTCGATGTATCCCAATATGCCCCCTTACTACTGA
Predicted protein sequences of Glyma.06g231000
>Glyma.06g231000.2.p sequence-type=predicted peptide transcript=Glyma.06g231000.2 locus=Glyma.06g231000 id=Glyma.06g231000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPTKKRKLDENGFNNNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAVRAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALREPSKRIDGRVTVTQLAAAGNSASNVNPADVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKLAITDGKQGKRVGPDSAQAHHGNVQHGHGDGVGAGMGMPPNAGSGPGQYGGPGQYGPPVGMGSYGGFGGQPPMGNHNHPLNSTNPVPGSLAGAGGYGGGMGGPYGGYGGGPGPGSTGFGGAGGMGGGGGGVGGGAGGGLGGAGGGSSMYRLPGSGGMPAGGTGGYPDSGHYGLSASSGYQNQHHPPSGTSPMPRVPPGSMYPNMPPYY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo