Glyma.06g220500

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Report for Sequence Feature Glyma.06g220500

Feature Type:	gene_model
Chromosome:	Gm06
Start:	26236107
stop:	26247541
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.06g220500

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G30600.1	AT	signal recognition particle receptor alpha subunit family protein	JGI	N/A	IEA
GO:0006184	GO-bp	GTP catabolic process	JGI	N/A	IEA
GO:0006614	GO-bp	SRP-dependent cotranslational protein targeting to membrane	EnsemblGenomes	N/A	IEA
GO:0006614	GO-bp	SRP-dependent cotranslational protein targeting to membrane	JGI	N/A	IEA
GO:0006886	GO-bp	intracellular protein transport	EnsemblGenomes	N/A	IEA
GO:0006886	GO-bp	intracellular protein transport	JGI	N/A	IEA
GO:0016192	GO-bp	vesicle-mediated transport	EnsemblGenomes	N/A	IEA
GO:0005785	GO-cc	signal recognition particle receptor complex	EnsemblGenomes	N/A	IEA
GO:0005785	GO-cc	signal recognition particle receptor complex	JGI	N/A	IEA
GO:0003924	GO-mf	GTPase activity	EnsemblGenomes	N/A	IEA
GO:0003924	GO-mf	GTPase activity	JGI	N/A	IEA
GO:0005047	GO-mf	signal recognition particle binding	EnsemblGenomes	N/A	IEA
GO:0005047	GO-mf	signal recognition particle binding	JGI	N/A	IEA
GO:0005525	GO-mf	GTP binding	EnsemblGenomes	N/A	IEA
GO:0005525	GO-mf	GTP binding	JGI	N/A	IEA
KOG0781	KOG	Signal recognition particle receptor, alpha subunit	JGI	N/A	IEA
PTHR11564	Panther	GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS	JGI	N/A	IEA
PTHR11564:SF8	Panther		JGI	N/A	IEA
PF00448	PFAM	SRP54-type protein, GTPase domain	JGI	N/A	IEA
PF02881	PFAM	SRP54-type protein, helical bundle domain	JGI	N/A	IEA
PF04086	PFAM	Signal recognition particle, alpha subunit, N-terminal	JGI	N/A	IEA

Expression Patterns of Glyma.06g220500

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g220500 not represented in the dataset	Glyma.06g220500 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.06g220500 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma06g28570	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.06g220500

Limit To All Plant Sequences

>Glyma.06g220500.2 sequence-type=transcript locus=Glyma.06g220500 ID=Glyma.06g220500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAGCGGCGCGCTTAGATCTGTACATGTAATCCATGTATAAATAAACCTTATAACAATTTTTCAAGAACTCCAATTTCAttttcattttttctttttctatttttaattgtctctgattttctCGTAGAACGCGTTTCTTGCCACTCCGAAAAACAAGAGGAAAAAATTGGAAGTTTTCAAGGATGTTAGAACAGTTACTGATATTTACAAGAGGAGGGTTAATCCTCTGGACTTGTAAGGAACTTGGGAACGCTCTGAAAGGTTCACCTATCGATACCTTGATCCGTTCCTGTCTTTTGGAGGAGCGATCTGGTGCGGCAGCATACAATTATGATGCCCCTGGTGCTTCCTACACCCTCAAGTGGACCTTCCACAATGATCTTGGTCTTGTTTTTGTGGCTGTTTACCAACGGATCCTTCACCTCTTATATGTGGAGGATCTGCTTGCTATGGTGAAGCGCGAGTTTTCGCAAGTTTATGATCCCAAAACGACTGCATACCCCGATTTCGATGAGACCTTTAGGCAGCTGAAGATGGAGGCCCTGGCTCGCACCGAGGATTTGAAGCGGTCGAATTCAAATCCTGTTGCCGGGAATGCGAAGAAGCAGGTGCAGGGGAATGATAAATCTGGATTTGAGGGAGGGAATAAGAAGAAGAAGAGTGGTGGTGGTGCGGATGGCGACGATGGCAAGCGGAAGTTGGAGAATGGACACTCCAATGGAAATTTTCTTGTTGCTAAAGATACTAACCTGAGTAGGGATGTGAATGGTAGACATAATGGAAGTCCCAATGTTGGGGCTTTTGATGTACATAAGCTTCAGAAGCTTAGGACCAAAGGTGGGAAGAAGACTGATACTGTTGTTGCCAAGGCCTCCAAGGCAGAGCCAAACAAAAAAGTCACGAAGAAAAATAGAGTTTGGGATGAAGCTGCAACTACAGAAACTAAACTGGACTTTACCGATCATTCCGGTGAGGATGGGGAGAGGAACATAGATTTTGTTGTGGCTGCTGATCAAGGTGAAAGTATGATGGATAAAGAAGAGATTGTTAGCAGTGAAAGTgagcaggaagaggaggacgaggatgaggaggaTGCAGGGAAGAACAGAAAGCCTGATGCCAAAAGCAAGGGTTGGTTTTCATCCATGTTCCAGAGTATTGCAGGGAAGGCAAATTTAGAGAAGTCAGACTTAGAACCAGCTTTAAAAGCTCTAAAGGATAGGCTCATGACCAAGAATGTGGCTGAGGAGATAGCTGAGAAACTCTGTGAATCAGTGGCAGCAAGTCTTGAAGGAAAAAAGCTGGCTTCATTTACAAGGATATCTTCAACAGTGCATGCGGCTATGGAAGAAGCTCTTATTCGAATTTTAACTCCTAGACGCTCTATTGATATACTGAGAGATGTGCATGCTGCCAAGGAGCAAAGGAAACCATATGTTGTTGTATTTGTTGGTGTTAATGGTGTTGGAAAATCTACTAATCTAGCTAAGGTTGCTTACTGGCTTTTGCAGCACAAGGTCAGTGTTATGATGGCTGCTTGTGACACATTTCGATCAGGGGCTGTTGAGCAGCTGCGGACCCATGCTCGAAGACTTCAGATCCCTATATTTGAGAAGGGCTATGAGAAAGATCCTGCCGTTGTGGCAAAAGAAGCAATTCAAGAAGCTTCACGCAATGGTTCGGATGTGGTTCTCGTTGATACAGCTGGTCGTATGCAGGATAATGAACCACTTATGAGAGCACTGTCAAAACTCATCTACCTTAACAATCCAGATCTAGTCTTATTTGTTGGAGAAGCACTGGTTGGTAATGACGCTGTTGATCAGCTTTCAAAGTTCAATCAGGTTTGATTCTATATTTTGCTCAATATTGCCCCGCTATTGCTGTTTTCCTTATTTTATGAAATAAATTAGAATATACTGACTCTGTAAAGATATTTTATACTGCCAGTATCATCCAATTAATCATGGATTGTTATATAAACAACTAAcgtaccccattgcccaaaggctcttcactaagcgaaggtatatgggagggtcattgtatacagccttatcattgtatatGGGAGGGTCACCAAGGCACAACTTTATCGCTGGGCCAAGATTCACCCTCAATCATGGATTGTTGTATAATTGAAAACTATTGACTTTTGTAATAATTACGTTAAAAGTTTCATTTAAGATTATTATTTGTAATTGTTAACAGTGCAAACATCTTCACATTGACAATGTGTCAAATTTTTTTTTTTTTTATTTAACCTCAATTATTTCACATTCACTGCAGAAATTAGCTGACCTTGCAACATCACCTAATCCAAGATTGATTGATGGGATCTTGCTCACGAAATTTGACACCATAGATGATAAGGTGGGAGCTGCACTTTCAATGGTTTACATATCTGGAGCTCCTGTCATGTTTGTGGGCTGTGGACAGTCTTATACTGACCTCAAGAAGCTCAATGTCAAATCAATTGTGAAGACTCTCCTTAAATGAGGGCACAAAGTGGTTTATTTTCCCTTGCAATCCTGTTTACCTGTCATGTTTGTTTCTGTTGAATGATGAACTTGTTAATCCTCGTTGATCCCATTACTTGGTGAGGAAAAAAACTATGTGGCTTTGACTTTTGAGGCAATTTGGTTTGTTTAGTTTAAGGAACTTGttattttttttaatcagcaaatgttagcttttagtttttgttagcaaggagattcgaacttacggcatctttctcccttcccttcttcctttattattaaattaaccgtatatctccGTTTAAGAAACTTGTATTCAGGATCATCCCTGCATCCACCATTTTGGGATGCTTCTTCATGACTGTAATATAAGGTGCAGGGAAAGACGTTTCCTGTATTACTCAAGATACTTTTTCCTCTCGCCCTCTCGGGATTTTCCATCATGAGAGTATGAAAAAAATAATTATGTTTTCAGTC

Coding sequences of Glyma.06g220500

Limit To All Plant Sequences

>Glyma.06g220500.1 sequence-type=CDS polypeptide=Glyma.06g220500.1.p locus=Glyma.06g220500 ID=Glyma.06g220500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTAGAACAGTTACTGATATTTACAAGAGGAGGGTTAATCCTCTGGACTTGTAAGGAACTTGGGAACGCTCTGAAAGGTTCACCTATCGATACCTTGATCCGTTCCTGTCTTTTGGAGGAGCGATCTGGTGCGGCAGCATACAATTATGATGCCCCTGGTGCTTCCTACACCCTCAAGTGGACCTTCCACAATGATCTTGGTCTTGTTTTTGTGGCTGTTTACCAACGGATCCTTCACCTCTTATATGTGGAGGATCTGCTTGCTATGGTGAAGCGCGAGTTTTCGCAAGTTTATGATCCCAAAACGACTGCATACCCCGATTTCGATGAGACCTTTAGGCAGCTGAAGATGGAGGCCCTGGCTCGCACCGAGGATTTGAAGCGGTCGAATTCAAATCCTGTTGCCGGGAATGCGAAGAAGCAGGTGCAGGGGAATGATAAATCTGGATTTGAGGGAGGGAATAAGAAGAAGAAGAGTGGTGGTGGTGCGGATGGCGACGATGGCAAGCGGAAGTTGGAGAATGGACACTCCAATGGAAATTTTCTTGTTGCTAAAGATACTAACCTGAGTAGGGATGTGAATGGTAGACATAATGGAAGTCCCAATGTTGGGGCTTTTGATGTACATAAGCTTCAGAAGCTTAGGACCAAAGGTGGGAAGAAGACTGATACTGTTGTTGCCAAGGCCTCCAAGGCAGAGCCAAACAAAAAAGTCACGAAGAAAAATAGAGTTTGGGATGAAGCTGCAACTACAGAAACTAAACTGGACTTTACCGATCATTCCGGTGAGGATGGGGAGAGGAACATAGATTTTGTTGTGGCTGCTGATCAAGGTGAAAGTATGATGGATAAAGAAGAGATTGTTAGCAGTGAAAGTGAGCAGGAAGAGGAGGACGAGGATGAGGAGGATGCAGGGAAGAACAGAAAGCCTGATGCCAAAAGCAAGGGTTGGTTTTCATCCATGTTCCAGAGTATTGCAGGGAAGGCAAATTTAGAGAAGTCAGACTTAGAACCAGCTTTAAAAGCTCTAAAGGATAGGCTCATGACCAAGAATGTGGCTGAGGAGATAGCTGAGAAACTCTGTGAATCAGTGGCAGCAAGTCTTGAAGGAAAAAAGCTGGCTTCATTTACAAGGATATCTTCAACAGTGCATGCGGCTATGGAAGAAGCTCTTATTCGAATTTTAACTCCTAGACGCTCTATTGATATACTGAGAGATGTGCATGCTGCCAAGGAGCAAAGGAAACCATATGTTGTTGTATTTGTTGGTGTTAATGGTGTTGGAAAATCTACTAATCTAGCTAAGGTTGCTTACTGGCTTTTGCAGCACAAGGTCAGTGTTATGATGGCTGCTTGTGACACATTTCGATCAGGGGCTGTTGAGCAGCTGCGGACCCATGCTCGAAGACTTCAGATCCCTATATTTGAGAAGGGCTATGAGAAAGATCCTGCCGTTGTGGCAAAAGAAGCAATTCAAGAAGCTTCACGCAATGGTTCGGATGTGGTTCTCGTTGATACAGCTGGTCGTATGCAGGATAATGAACCACTTATGAGAGCACTGTCAAAACTCATCTACCTTAACAATCCAGATCTAGTCTTATTTGTTGGAGAAGCACTGGTTGGTAATGACGCTGTTGATCAGCTTTCAAAGTTCAATCAGAAATTAGCTGACCTTGCAACATCACCTAATCCAAGATTGATTGATGGGATCTTGCTCACGAAATTTGACACCATAGATGATAAGGTGGGAGCTGCACTTTCAATGGTTTACATATCTGGAGCTCCTGTCATGTTTGTGGGCTGTGGACAGTCTTATACTGACCTCAAGAAGCTCAATGTCAAATCAATTGTGAAGACTCTCCTTAAATGA

>Glyma.06g220500.2 sequence-type=CDS polypeptide=Glyma.06g220500.2.p locus=Glyma.06g220500 ID=Glyma.06g220500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTAGAACAGTTACTGATATTTACAAGAGGAGGGTTAATCCTCTGGACTTGTAAGGAACTTGGGAACGCTCTGAAAGGTTCACCTATCGATACCTTGATCCGTTCCTGTCTTTTGGAGGAGCGATCTGGTGCGGCAGCATACAATTATGATGCCCCTGGTGCTTCCTACACCCTCAAGTGGACCTTCCACAATGATCTTGGTCTTGTTTTTGTGGCTGTTTACCAACGGATCCTTCACCTCTTATATGTGGAGGATCTGCTTGCTATGGTGAAGCGCGAGTTTTCGCAAGTTTATGATCCCAAAACGACTGCATACCCCGATTTCGATGAGACCTTTAGGCAGCTGAAGATGGAGGCCCTGGCTCGCACCGAGGATTTGAAGCGGTCGAATTCAAATCCTGTTGCCGGGAATGCGAAGAAGCAGGTGCAGGGGAATGATAAATCTGGATTTGAGGGAGGGAATAAGAAGAAGAAGAGTGGTGGTGGTGCGGATGGCGACGATGGCAAGCGGAAGTTGGAGAATGGACACTCCAATGGAAATTTTCTTGTTGCTAAAGATACTAACCTGAGTAGGGATGTGAATGGTAGACATAATGGAAGTCCCAATGTTGGGGCTTTTGATGTACATAAGCTTCAGAAGCTTAGGACCAAAGGTGGGAAGAAGACTGATACTGTTGTTGCCAAGGCCTCCAAGGCAGAGCCAAACAAAAAAGTCACGAAGAAAAATAGAGTTTGGGATGAAGCTGCAACTACAGAAACTAAACTGGACTTTACCGATCATTCCGGTGAGGATGGGGAGAGGAACATAGATTTTGTTGTGGCTGCTGATCAAGGTGAAAGTATGATGGATAAAGAAGAGATTGTTAGCAGTGAAAGTGAGCAGGAAGAGGAGGACGAGGATGAGGAGGATGCAGGGAAGAACAGAAAGCCTGATGCCAAAAGCAAGGGTTGGTTTTCATCCATGTTCCAGAGTATTGCAGGGAAGGCAAATTTAGAGAAGTCAGACTTAGAACCAGCTTTAAAAGCTCTAAAGGATAGGCTCATGACCAAGAATGTGGCTGAGGAGATAGCTGAGAAACTCTGTGAATCAGTGGCAGCAAGTCTTGAAGGAAAAAAGCTGGCTTCATTTACAAGGATATCTTCAACAGTGCATGCGGCTATGGAAGAAGCTCTTATTCGAATTTTAACTCCTAGACGCTCTATTGATATACTGAGAGATGTGCATGCTGCCAAGGAGCAAAGGAAACCATATGTTGTTGTATTTGTTGGTGTTAATGGTGTTGGAAAATCTACTAATCTAGCTAAGGTTGCTTACTGGCTTTTGCAGCACAAGGTCAGTGTTATGATGGCTGCTTGTGACACATTTCGATCAGGGGCTGTTGAGCAGCTGCGGACCCATGCTCGAAGACTTCAGATCCCTATATTTGAGAAGGGCTATGAGAAAGATCCTGCCGTTGTGGCAAAAGAAGCAATTCAAGAAGCTTCACGCAATGGTTCGGATGTGGTTCTCGTTGATACAGCTGGTCGTATGCAGGATAATGAACCACTTATGAGAGCACTGTCAAAACTCATCTACCTTAACAATCCAGATCTAGTCTTATTTGTTGGAGAAGCACTGGTTGGTAATGACGCTGTTGATCAGCTTTCAAAGTTCAATCAGGTTTGA

Predicted protein sequences of Glyma.06g220500

Limit To All Plant Sequences

>Glyma.06g220500.1.p sequence-type=predicted peptide transcript=Glyma.06g220500.1 locus=Glyma.06g220500 ID=Glyma.06g220500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAAAYNYDAPGASYTLKWTFHNDLGLVFVAVYQRILHLLYVEDLLAMVKREFSQVYDPKTTAYPDFDETFRQLKMEALARTEDLKRSNSNPVAGNAKKQVQGNDKSGFEGGNKKKKSGGGADGDDGKRKLENGHSNGNFLVAKDTNLSRDVNGRHNGSPNVGAFDVHKLQKLRTKGGKKTDTVVAKASKAEPNKKVTKKNRVWDEAATTETKLDFTDHSGEDGERNIDFVVAADQGESMMDKEEIVSSESEQEEEDEDEEDAGKNRKPDAKSKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVHAAMEEALIRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLATSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK*

>Glyma.06g220500.2.p sequence-type=predicted peptide transcript=Glyma.06g220500.2 locus=Glyma.06g220500 ID=Glyma.06g220500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAAAYNYDAPGASYTLKWTFHNDLGLVFVAVYQRILHLLYVEDLLAMVKREFSQVYDPKTTAYPDFDETFRQLKMEALARTEDLKRSNSNPVAGNAKKQVQGNDKSGFEGGNKKKKSGGGADGDDGKRKLENGHSNGNFLVAKDTNLSRDVNGRHNGSPNVGAFDVHKLQKLRTKGGKKTDTVVAKASKAEPNKKVTKKNRVWDEAATTETKLDFTDHSGEDGERNIDFVVAADQGESMMDKEEIVSSESEQEEEDEDEEDAGKNRKPDAKSKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVHAAMEEALIRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQV*

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