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Report for Sequence Feature Glyma.06g215900

Feature Type:gene_model
Chromosome:Gm06
Start:22470105
stop:22471256
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g215900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G20060.1AT alpha/beta-Hydrolases superfamily protein JGI N/AIEA
GO:0002084GO-bp protein depalmitoylation EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0008474GO-mf palmitoyl-(protein) hydrolase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
GO:0052689GO-mf carboxylic ester hydrolase activity EnsemblGenomesN/AIEA
PTHR10655Panther LYSOPHOSPHOLIPASE-RELATED JGI N/AIEA
PTHR10655:SF5Panther JGI N/AIEA
PF02230PFAM Phospholipase/Carboxylesterase JGI N/AIEA
GN7V-64655SoyCyc9-rxn carboxylesterase Plant Metabolic Network ISS

Expression Patterns of Glyma.06g215900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g215900 not represented in the dataset
Glyma.06g215900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.06g215900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g24671 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g215900
>Glyma.06g215900.1 sequence-type=CDS polypeptide=Glyma.06g215900.1.p locus=Glyma.06g215900 ID=Glyma.06g215900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTATTGGTAATTTAACTTTGAATTGTGGACTGAATAACATTTGCATTTATATACTTTCAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCAAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAACGGGCTTGGACACTACACCATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGGGCCTTGAGGGGAACATTGCTTAG
Predicted protein sequences of Glyma.06g215900
>Glyma.06g215900.1.p sequence-type=predicted peptide transcript=Glyma.06g215900.1 locus=Glyma.06g215900 ID=Glyma.06g215900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAIGNLTLNCGLNNICIYILSVDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLGLEGNIA*






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