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Report for Sequence Feature Glyma.06g202100

Feature Type:gene_model
Chromosome:Gm06
Start:18694636
stop:18699928
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g202100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G61150.1AT leo1-like family protein JGI N/AIEA
AT5G61150.2AT leo1-like family protein JGI N/AIEA
GO:0006368GO-bp transcription elongation from RNA polymerase II promoter EnsemblGenomesN/AIEA
GO:0016570GO-bp histone modification EnsemblGenomesN/AIEA
GO:0032968GO-bp positive regulation of transcription elongation from RNA polymerase II promoter EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:0016593GO-cc Cdc73/Paf1 complex EnsemblGenomesN/AIEA
GO:1990269GO-mf RNA polymerase II C-terminal domain phosphoserine binding EnsemblGenomesN/AIEA
KOG2428 KOG Uncharacterized conserved protein JGI N/AIEA
PTHR23146Panther LEO1 PROTEIN JGI N/AIEA
PF04004PFAM Leo1-like protein JGI N/AIEA

Expression Patterns of Glyma.06g202100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.06g202100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g21900 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.06g202100
>Glyma.06g202100.2 sequence-type=transcript locus=Glyma.06g202100 ID=Glyma.06g202100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAACGCGACCCATCACTGTGTGTTTAACACACAGCAGAAAAGAACAAACCGCAGGTTCTTCCTAATCGAAACGGTTCCAAAGTAGTGAATAAACAAATTCTCGTGCCTAGGGTTTTCCCTTTTCTTCGATTCACACTCCCAGAGCGAAGCAACCGTCATGGGAGGAGGCGAGGAGAAGCGGCACCAGATGATGCAGAACCTCTTCGGAGATCAATCCGAGGAGGAGGAAGAGCTCGACGTCGATTCCGAGCACGAATCGAACCCGCAACAAAATTACCCCTCCGACgagggggagggggagggtgtgggggagcaggagggagagggcgaggtggagggccagggggaggttgaaatcgagagcgatggcgacggagatggggagcccgaccgcgagagcgagggcgagagggagcagagctcgcaggaggtggaggtcgtggagagggaagaggagagcgaggggagagACTCAGATAGTGACGTCAAGGACGGCGGGTACAGCCAGCGCGGCGTCACGAGCAAGCGGAGGGACGACTTCGTCGAGAGCGGATCCGAGGAGAATCAGTATGCTCACCATGATGACGGGGAAGAAGAGGTCGACGAAGCCAGAAGCCCTAGTGGGTCACCCAGGGATGAAAAAGATGAGACTCGGGACTTGCATTCAGCCCCAGAAATTCGTGATGTGTTTGGTGATTTTGATGATGATGAAGAGGAGGAAATGGGGTATGCAATCCAGCAGGACATTGAACAAGATTCGAATAGATACCCTATGGAGGAGGAAGGGAGTTACGGAAAGAATCTGAGACCTGAAGATATACTTGCTGATGAAGATCATCAGTATGAATCGGAGGAGGAAAACATTGAGATAAAAACTAAGGAGAAGCCACTTGGCCCCCCTTTAGAGTTAGAGGTTCCGTTACGACCACCTCCAGCTCTTCCAGAAAAGATGAACATGATTAAAGTTTCCAATATTATGGGTGTTGATCCAAAACCATTTGATCCTAAAACATATGTGGAAGAGGATACTTTTGTAACCGATGAATCTGGAACCAGAAAACGCATACGTTTGGAGAACAATATTGTACGCTGGAGGACTACTAAAAATCCTGATGGCACAACATCAtgtgaaagcaatgctcgctttgtgagatggtccgatggcagcctgcagttgttaattgggaatgaagttcttgacatatcagtgcaagatgcacagcatgatcaagcacatcttttccttagacatggaaagGGTATCCTCCAATCACAAGGAAGGTTGTTAAGGAAAATGAGGTTTATGCCATCTTCCTTGTCATCAAATTCTCATCGGCTGTTGACTGCCCTTGTTGACTCAAGGCATAAGAAGGTTTTTAAGGTGAAAAACTGCATAactgacattgatcctgagagggaaaaagaggaaaaagagaaggctgaaagccaaaatatccgcgcaaatgtgcttcttaaCCGAAAGCGTGAGAAGGTGAATCGGAAGTATACTCCAGCTGTGGAGAGGAGGCGTCAACTTTCTCCTGGGTTTTTAGAGGATGCTTTGGATGAGGAGGATGAAGCGGATTATTATGATAATCGTCGTTCTCAGCATCGCTTTGAGGATGATTTGGAAGCGGAAGCCCGAGCAGAGAAACGAATTATGAATGCTAAAAAGTCGCAGGGACCTAAAGATATCCCTCGTAAGTCTTCCTTCCCACCTGCTAAATCCTCTCGGAACCCAATGGGTTACCCAGATGATGAGAGAGAGGAGTCTGAGTATGAAACTGAGGAGGAAGATGAGAGGCCTCCTTCACGTAAGAGGGATGAGGATACTGAGCCAGAGTATGAGGATGAGGAAGAAGAGGAAGAACACTATGAAGAAGCTGAACAAGTTAATGATGCATCAGATGAGGAGGAAGAGGAGgaaccaaagcagaagaacaaggagtttagaggcagtgccaaaaggaagggatttgaatctgatgaggactctcctccaaggaaaacaaccacCCATCGGCGGATGGCGGTTGTGTACGATAGTGATGAGGACTAAACTTGAGCTAGATTTTCATGGGAAGTGCAGCTATCTGATGCAGCAAAGGCAGAGATGGCTCTTAGTTCCCCCCATATATAGCTACATTTTTAATATTTCATCCTTATATACATAAAGCAGAGCCTGGGACACTAAAGTAGTGTTTATTCTCAGGTCACAATATATGTTTTTTTGACTGTCTTGTTAATGGTGATAAAAGAAATTCAGTGTAAATAAGTTTGTTTTTCTGTATTTTCCGATCACAAATTTTCGTCCAAGGGGCAGGTAATGGTTGACAAGTGCCGGACCTAAGGAACTTGTTCAAGGTCCTTCCCTTTTTTACTTTATCAAATGAATGATGTCATTACTTTGCAACTTT
Coding sequences of Glyma.06g202100
>Glyma.06g202100.1 sequence-type=CDS polypeptide=Glyma.06g202100.1.p locus=Glyma.06g202100 ID=Glyma.06g202100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGGAGGCGAGGAGAAGCGGCACCAGATGATGCAGAACCTCTTCGGAGATCAATCCGAGGAGGAGGAAGAGCTCGACGTCGATTCCGAGCACGAATCGAACCCGCAACAAAATTACCCCTCCGACGAGGGGGAGGGGGAGGGTGTGGGGGAGCAGGAGGGAGAGGGCGAGGTGGAGGGCCAGGGGGAGGTTGAAATCGAGAGCGATGGCGACGGAGATGGGGAGCCCGACCGCGAGAGCGAGGGCGAGAGGGAGCAGAGCTCGCAGGAGGTGGAGGTCGTGGAGAGGGAAGAGGAGAGCGAGGGGAGAGACTCAGATAGTGACGTCAAGGACGGCGGGTACAGCCAGCGCGGCGTCACGAGCAAGCGGAGGGACGACTTCGTCGAGAGCGGATCCGAGGAGAATCAGTATGCTCACCATGATGACGGGGAAGAAGAGGTCGACGAAGCCAGAAGCCCTAGTGGGTCACCCAGGGATGAAAAAGATGAGACTCGGGACTTGCATTCAGCCCCAGAAATTCGTGATGTGTTTGGTGATTTTGATGATGATGAAGAGGAGGAAATGGGGTATGCAATCCAGCAGGACATTGAACAAGATTCGAATAGATACCCTATGGAGGAGGAAGGGAGTTACGGAAAGAATCTGAGACCTGAAGATATACTTGCTGATGAAGATCATCAGTATGAATCGGAGGAGGAAAACATTGAGATAAAAACTAAGGAGAAGCCACTTGGCCCCCCTTTAGAGTTAGAGGTTCCGTTACGACCACCTCCAGCTCTTCCAGAAAAGATGAACATGATTAAAGTTTCCAATATTATGGGTGTTGATCCAAAACCATTTGATCCTAAAACATATGTGGAAGAGGATACTTTTGTAACCGATGAATCTGGAACCAGAAAACGCATACGTTTGGAGAACAATATTGTACGCTGGAGGACTACTAAAAATCCTGATGGCACAACATCATGTGAAAGCAATGCTCGCTTTGTGAGATGGTCCGATGGCAGCCTGCAGTTGTTAATTGGGAATGAAGTTCTTGACATATCAGTGCAAGATGCACAGCATGATCAAGCACATCTTTTCCTTAGACATGGAAAGGGTATCCTCCAATCACAAGGAAGGTTGTTAAGGAAAATGAGGTTTATGCCATCTTCCTTGTCATCAAATTCTCATCGGCTGTTGACTGCCCTTGTTGACTCAAGGCATAAGAAGGTTTTTAAGGTGAAAAACTGCATAACTGACATTGATCCTGAGAGGGAAAAAGAGGAAAAAGAGAAGGCTGAAAGCCAAAATATCCGCGCAAATGTGCTTCTTAACCGAAAGCGTGAGAAGGTGAATCGGAAGTATACTCCAGCTGTGGAGAGGAGGCGTCAACTTTCTCCTGGGTTTTTAGAGGATGCTTTGGATGAGGAGGATGAAGCGGATTATTATGATAATCGTCGTTCTCAGCATCGCTTTGAGGATGATTTGGAAGCGGAAGCCCGAGCAGAGAAACGAATTATGAATGCTAAAAAGTCGCAGGGACCTAAAGATATCCCTCGTAAGTCTTCCTTCCCACCTGCTAAATCCTCTCGGAACCCAATGGGTTACCCAGATGATGAGAGAGAGGAGTCTGAGTATGAAACTGAGGAGGAAGATGAGAGGCCTCCTTCACGTAAGAGGGATGAGGATACTGAGCCAGAGTATGAGGATGAGGAAGAAGAGGAAGAACACTATGAAGAAGCTGAACAAGTTAATGATGCATCAGATGAGGAGGAAGAGGAGGTACTGCTTATTTTATTAAAAAAATTAGTCAGCTTTAACTTTGGCAGTAGGCCCATGGAGTTATTTCTGATTAGTTTCAGATTGCTTCTTAGCAGTGCCTCCTTATTGTTAAGTGTTAATAAGGAACCAAAGCAGAAGAACAAGGAGTTTAGAGGCAGTGCCAAAAGGAAGGGATTTGAATCTGATGAGGACTCTCCTCCAAGGAAAACAACCACCCATCGGCGGATGGCGGTTGTGTACGATAGTGATGAGGACTAA

>Glyma.06g202100.2 sequence-type=CDS polypeptide=Glyma.06g202100.2.p locus=Glyma.06g202100 ID=Glyma.06g202100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGGAGGCGAGGAGAAGCGGCACCAGATGATGCAGAACCTCTTCGGAGATCAATCCGAGGAGGAGGAAGAGCTCGACGTCGATTCCGAGCACGAATCGAACCCGCAACAAAATTACCCCTCCGACGAGGGGGAGGGGGAGGGTGTGGGGGAGCAGGAGGGAGAGGGCGAGGTGGAGGGCCAGGGGGAGGTTGAAATCGAGAGCGATGGCGACGGAGATGGGGAGCCCGACCGCGAGAGCGAGGGCGAGAGGGAGCAGAGCTCGCAGGAGGTGGAGGTCGTGGAGAGGGAAGAGGAGAGCGAGGGGAGAGACTCAGATAGTGACGTCAAGGACGGCGGGTACAGCCAGCGCGGCGTCACGAGCAAGCGGAGGGACGACTTCGTCGAGAGCGGATCCGAGGAGAATCAGTATGCTCACCATGATGACGGGGAAGAAGAGGTCGACGAAGCCAGAAGCCCTAGTGGGTCACCCAGGGATGAAAAAGATGAGACTCGGGACTTGCATTCAGCCCCAGAAATTCGTGATGTGTTTGGTGATTTTGATGATGATGAAGAGGAGGAAATGGGGTATGCAATCCAGCAGGACATTGAACAAGATTCGAATAGATACCCTATGGAGGAGGAAGGGAGTTACGGAAAGAATCTGAGACCTGAAGATATACTTGCTGATGAAGATCATCAGTATGAATCGGAGGAGGAAAACATTGAGATAAAAACTAAGGAGAAGCCACTTGGCCCCCCTTTAGAGTTAGAGGTTCCGTTACGACCACCTCCAGCTCTTCCAGAAAAGATGAACATGATTAAAGTTTCCAATATTATGGGTGTTGATCCAAAACCATTTGATCCTAAAACATATGTGGAAGAGGATACTTTTGTAACCGATGAATCTGGAACCAGAAAACGCATACGTTTGGAGAACAATATTGTACGCTGGAGGACTACTAAAAATCCTGATGGCACAACATCATGTGAAAGCAATGCTCGCTTTGTGAGATGGTCCGATGGCAGCCTGCAGTTGTTAATTGGGAATGAAGTTCTTGACATATCAGTGCAAGATGCACAGCATGATCAAGCACATCTTTTCCTTAGACATGGAAAGGGTATCCTCCAATCACAAGGAAGGTTGTTAAGGAAAATGAGGTTTATGCCATCTTCCTTGTCATCAAATTCTCATCGGCTGTTGACTGCCCTTGTTGACTCAAGGCATAAGAAGGTTTTTAAGGTGAAAAACTGCATAACTGACATTGATCCTGAGAGGGAAAAAGAGGAAAAAGAGAAGGCTGAAAGCCAAAATATCCGCGCAAATGTGCTTCTTAACCGAAAGCGTGAGAAGGTGAATCGGAAGTATACTCCAGCTGTGGAGAGGAGGCGTCAACTTTCTCCTGGGTTTTTAGAGGATGCTTTGGATGAGGAGGATGAAGCGGATTATTATGATAATCGTCGTTCTCAGCATCGCTTTGAGGATGATTTGGAAGCGGAAGCCCGAGCAGAGAAACGAATTATGAATGCTAAAAAGTCGCAGGGACCTAAAGATATCCCTCGTAAGTCTTCCTTCCCACCTGCTAAATCCTCTCGGAACCCAATGGGTTACCCAGATGATGAGAGAGAGGAGTCTGAGTATGAAACTGAGGAGGAAGATGAGAGGCCTCCTTCACGTAAGAGGGATGAGGATACTGAGCCAGAGTATGAGGATGAGGAAGAAGAGGAAGAACACTATGAAGAAGCTGAACAAGTTAATGATGCATCAGATGAGGAGGAAGAGGAGGAACCAAAGCAGAAGAACAAGGAGTTTAGAGGCAGTGCCAAAAGGAAGGGATTTGAATCTGATGAGGACTCTCCTCCAAGGAAAACAACCACCCATCGGCGGATGGCGGTTGTGTACGATAGTGATGAGGACTAA
Predicted protein sequences of Glyma.06g202100
>Glyma.06g202100.1.p sequence-type=predicted peptide transcript=Glyma.06g202100.1 locus=Glyma.06g202100 ID=Glyma.06g202100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGGGEEKRHQMMQNLFGDQSEEEEELDVDSEHESNPQQNYPSDEGEGEGVGEQEGEGEVEGQGEVEIESDGDGDGEPDRESEGEREQSSQEVEVVEREEESEGRDSDSDVKDGGYSQRGVTSKRRDDFVESGSEENQYAHHDDGEEEVDEARSPSGSPRDEKDETRDLHSAPEIRDVFGDFDDDEEEEMGYAIQQDIEQDSNRYPMEEEGSYGKNLRPEDILADEDHQYESEEENIEIKTKEKPLGPPLELEVPLRPPPALPEKMNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGTRKRIRLENNIVRWRTTKNPDGTTSCESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMPSSLSSNSHRLLTALVDSRHKKVFKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKREKVNRKYTPAVERRRQLSPGFLEDALDEEDEADYYDNRRSQHRFEDDLEAEARAEKRIMNAKKSQGPKDIPRKSSFPPAKSSRNPMGYPDDEREESEYETEEEDERPPSRKRDEDTEPEYEDEEEEEEHYEEAEQVNDASDEEEEEVLLILLKKLVSFNFGSRPMELFLISFRLLLSSASLLLSVNKEPKQKNKEFRGSAKRKGFESDEDSPPRKTTTHRRMAVVYDSDED*

>Glyma.06g202100.2.p sequence-type=predicted peptide transcript=Glyma.06g202100.2 locus=Glyma.06g202100 ID=Glyma.06g202100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGGGEEKRHQMMQNLFGDQSEEEEELDVDSEHESNPQQNYPSDEGEGEGVGEQEGEGEVEGQGEVEIESDGDGDGEPDRESEGEREQSSQEVEVVEREEESEGRDSDSDVKDGGYSQRGVTSKRRDDFVESGSEENQYAHHDDGEEEVDEARSPSGSPRDEKDETRDLHSAPEIRDVFGDFDDDEEEEMGYAIQQDIEQDSNRYPMEEEGSYGKNLRPEDILADEDHQYESEEENIEIKTKEKPLGPPLELEVPLRPPPALPEKMNMIKVSNIMGVDPKPFDPKTYVEEDTFVTDESGTRKRIRLENNIVRWRTTKNPDGTTSCESNARFVRWSDGSLQLLIGNEVLDISVQDAQHDQAHLFLRHGKGILQSQGRLLRKMRFMPSSLSSNSHRLLTALVDSRHKKVFKVKNCITDIDPEREKEEKEKAESQNIRANVLLNRKREKVNRKYTPAVERRRQLSPGFLEDALDEEDEADYYDNRRSQHRFEDDLEAEARAEKRIMNAKKSQGPKDIPRKSSFPPAKSSRNPMGYPDDEREESEYETEEEDERPPSRKRDEDTEPEYEDEEEEEEHYEEAEQVNDASDEEEEEEPKQKNKEFRGSAKRKGFESDEDSPPRKTTTHRRMAVVYDSDED*






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