SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g196200

Feature Type:gene_model
Chromosome:Gm06
Start:17550832
stop:17556959
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g196200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G61380.1AT APRR1,AtTOC1,PRR1,TOC1 JGI N/AIEA
GO:0000160GO-bp phosphorelay signal transduction system JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K12127KEGG Circadian rhythm - plant JGI N/AIEA
PF00072Pfam Response regulator receiver domain JGI N/AIEA
PF06203Pfam CCT motif JGI N/AIEA

Proteins Associated with Glyma.06g196200
LocusGene SymbolProtein Name
TOC1 timing of CAB expression 1

Gene model name correspondences to Glyma.06g196200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g21120 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g196200
>Glyma.06g196200.1 sequence-type=CDS polypeptide=Glyma.06g196200.1.p locus=Glyma.06g196200 id=Glyma.06g196200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTCTGGTGAGGAGATTAATTTGAACATAGAGAGTGGTGGGAAGAGTGGTGGTGATGGGTTCATTGATAGGAGTAAGGTGCGGATTTTGTTGTGCGATAACGATTCCAAGAGTTCTCAAGAGGTTTTCACGCTTCTTTTGAGGTGTTCTTATCAGGTTACCTTGGTAAAGTCGGCAAGACAGGTAATTGATGCACTGAATGCAGAAGGGCAACATATAGATATCATACTGGCTGAACTTGACCTTCCGATGAAGAAGGGTATGAAGATGTTGAAGTACATAGCACGTGATAAAGAGTTTCGCAGAATCCCTGTTATAATGATGTCCGCACAAGATGAGGTATCCATTGTTGTTAAGTGCTTGAGACTTGGAGCAGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGACGGAGGCGCATGCTTGGACTTGTAGAGAAGAACATCTTGAATTACGATTTTGATCTGGTAGTATCTGACCCTAGTGATGCCAACACAAACAGTACCACCTTGTTCTCTGATGACACAGATGACAAGTCCAAGAGAAGCACTAATCCAGAGGCAGGAATATCAGTCCAACAAGAACAAGAGTCTACTATTGCAAATGCTGCTGCTGTTGAGGGACCTCCAGATGCTCATGCATCAGAATGTGGGCCTGATGTGGATGGAGTTAATGATCACCAAACAGCACATTTTTCATCTGGTCCGAAGAAGAGTGAACTAAGGATAGGGGAGTCATCAGCCTTCTTCACGTATGTTAAAGCATCAATACTTAAGAGCAACTTCGAAGGGGTTGTTAATGTAGACAACAATGGTGCTACGCATGTTGGGATGGAAGTTATGCATCAAGCATGTGCTCAACAAGGGGTGAATAGCCTTCAAATACTGGAAAATGGAGAGGCATGTGAAAGTCAATCGCAAGATGACTTACCCAGCAGCACTAGTATTCCTGATTCTTTGTCTATTGAGAGGTCTTGTACTCCACCTGCATCAATGGAAGTTTCACAGCAAAAGCACTACAGGGAAGAAAATTCACAACAGGGTGTGATGCATCCCAGAAATGGGACCCATTGTTCCGAGCATGAAGTATCTGGCATGGCTTCCCAACATGCTTATCCATATTATATTTCAGGGGTTGTTAATCATGTTATGATGCCTTCATCAGCACAAATGTATCATCAAAAGAATATCCAGGACCTACAGAATCATACTAGCACAGCTATGATTTCACAATACAATCATCTTCCCCAAGGCGGTCCTCATGGAACGGGGATGACATCCTTCCCATACTACCCAATGAGCATATGCTTACAACCTGGTCAGATTCCTAATCCTCATTCATGGCAATCATTTGGAAACTCAAGTCCATCAGAAGCCAAATTAATTAAAGTTGATAGGAGAGAAGCAGCATTGATGAAATTCAGACAGAAAAGGAAAGAGCGCTGCTTTGATAAGAAAATTAGGTACATTAACAGGAAACGACTTGCTGAAAGGCGGCCTCGTGTAAGGGGACAGTTTGTCAGAAAGTTGAACGGTGCTAATGTGGATCTTAACGGGGAGCCTGCATCAATTGACTATGACGAAGATGACGAAGAGGATGAAGATGACCAGGGAGCAAGAGATTCTTCTCCTGAGGATGCTTGA
Predicted protein sequences of Glyma.06g196200
>Glyma.06g196200.1.p sequence-type=predicted peptide transcript=Glyma.06g196200.1 locus=Glyma.06g196200 id=Glyma.06g196200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MESGEEINLNIESGGKSGGDGFIDRSKVRILLCDNDSKSSQEVFTLLLRCSYQVTLVKSARQVIDALNAEGQHIDIILAELDLPMKKGMKMLKYIARDKEFRRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNILNYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSTNPEAGISVQQEQESTIANAAAVEGPPDAHASECGPDVDGVNDHQTAHFSSGPKKSELRIGESSAFFTYVKASILKSNFEGVVNVDNNGATHVGMEVMHQACAQQGVNSLQILENGEACESQSQDDLPSSTSIPDSLSIERSCTPPASMEVSQQKHYREENSQQGVMHPRNGTHCSEHEVSGMASQHAYPYYISGVVNHVMMPSSAQMYHQKNIQDLQNHTSTAMISQYNHLPQGGPHGTGMTSFPYYPMSICLQPGQIPNPHSWQSFGNSSPSEAKLIKVDRREAALMKFRQKRKERCFDKKIRYINRKRLAERRPRVRGQFVRKLNGANVDLNGEPASIDYDEDDEEDEDDQGARDSSPEDA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo