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Report for Sequence Feature Glyma.06g188800

Feature Type:gene_model
Chromosome:Gm06
Start:16420198
stop:16423123
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g188800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G02850.1AT JGI N/AIEA
GO:0006357GO-bp regulation of transcription by RNA polymerase II JGI N/AIEA
GO:0016592GO-cc mediator complex JGI N/AIEA
PTHR13208PantherFam MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 JGI N/AIEA
PF10018Pfam Vitamin-D-receptor interacting Mediator subunit 4 JGI N/AIEA

Proteins Associated with Glyma.06g188800
LocusGene SymbolProtein Name
MED4-1 Mediator Complex 4 gene 1

Gene model name correspondences to Glyma.06g188800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g20060 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g188800
>Glyma.06g188800.1 sequence-type=CDS polypeptide=Glyma.06g188800.1.p locus=Glyma.06g188800 id=Glyma.06g188800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTCAACACCAAATTGTTCAGTCCCCTGCTATGCTAGGCCTTGCAAATCCTAACTCCCCATCAATTCCGAACCCTACCCCTCCAAAGCTCCCTCCAACACAGACCCATCACCCCCAAGACCGCAACTCTTCAACCCCTTCTTCAGCTCTCTTGTCTCTCCTCCCACCTCACCTCAGAGCCCAAGCACTTCTTGCCCAAATGGCTTCCTTAGCCTCCAAGCTCTTTGAAGTTTCCCCCAATCGGTCCCTTTGGGTCACTGCCTTTCGTGGATCCCTTCCAACTTTCCTCTCTTCCCATTCGTCTACCCCACTTGACACTTCTCCTTCTGATGGCAAAGAAATCATCTCCCTTTTTACTGTTCTCCAAACCCAAATCTTTGAAGCTATTGCTGAACTCCAAGAGATTCTGGACCTTCAAGATGCCAAGCAAAAGATTGACTGCGAAATTCACTCCCAAGATTCAACACTACTTGCATTTGCCAACAAACTCAAAGAAGCCGAGAGTTGCCTCGACATCCTTGTTGATGATTACTCCGATTACCACCGCTCCAAGCGATCAAAATCTGGAGATGATGATTCAATGACTTCATCAACCATCTCGTCTCAGCTGAAGCTGTCGGATATGTTATCATATGCCCACCGGATAAGTTACACCACCTTTGCACCACCAGAATTCGGAGCTGGCCAAGCTCCTCTCCGTGGCGCACTGCCACCTGCACCACAAGAAGAGCAAATGAGAGCTTCACAGTTGTATAATTTTGCTGACCTTGATGTTGGATTGCCTAAAGAAGTTGAAACCAAGGAGAAAATTGTTGAAGCTATTGTTGAGCCTCCACCACAGGTGGATACTAATACAGTTCCGAATTTGTCTGCATTTCAAGGGATGTTACCTCCGATGCCACCTGGCTGGAAGCCGGGAATGCCTGTGCAATTGCCTATTGATTTGCCTCTTCCCCCGCCTGGGTGGAAACCAGGGGATCCTGTGCCGTTGCCTCCCATGGACTCGCTTCAAATACCGAGATTTGCAGAGCAACAAATGCAACCTCACATTCCTCAGCCCAAGCAACCAGAAGTTATTCAAGTGCAGCCAGTTAATTTGGACCTTGGAGGAAGTGATACTAGTGATTATAGTAGTGATGATGCCAGCTCTGATGATGAAGATTGA

>Glyma.06g188800.3 sequence-type=CDS polypeptide=Glyma.06g188800.3.p locus=Glyma.06g188800 id=Glyma.06g188800.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTCAACACCAAATTGTTCAGTCCCCTGCTATGCTAGGCCTTGCAAATCCTAACTCCCCATCAATTCCGAACCCTACCCCTCCAAAGCTCCCTCCAACACAGACCCATCACCCCCAAGACCGCAACTCTTCAACCCCTTCTTCAGCTCTCTTGTCTCTCCTCCCACCTCACCTCAGAGCCCAAGCACTTCTTGCCCAAATGGCTTCCTTAGCCTCCAAGCTCTTTGAAGTTTCCCCCAATCGGTCCCTTTGGGTCACTGCCTTTCGTGGATCCCTTCCAACTTTCCTCTCTTCCCATTCGTCTACCCCACTTGACACTTCTCCTTCTGATGGCAAAGAAATCATCTCCCTTTTTACTGTTCTCCAAACCCAAATCTTTGAAGCTATTGCTGAACTCCAAGAGATTCTGGACCTTCAAGATGCCAAGCAAAAGATTGACTGCGAAATTCACTCCCAAGATTCAACACTACTTGCATTTGCCAACAAACTCAAAGAAGCCGAGAGTTGCCTCGACATCCTTGTTGATGATTACTCCGATTACCACCGCTCCAAGCGATCAAAATCTGGAGATGATGATTCAATGACTTCATCAACCATCTCGTCTCAGCTGAAGCTGTCGGATATGTTATCATATGCCCACCGGATAAGTTACACCACCTTTGCACCACCAGAATTCGGAGCTGGCCAAGCTCCTCTCCGTGGCGCACTGCCACCTGCACCACAAGAAGAGCAAATGAGAGCTTCACAGTTGTATAATTTTGCTGACCTTGATGTTGGATTGCCTAAAGAAGTTGAAACCAAGGAGAAAATTGTTGAAGCTATTGTTGAGCCTCCACCACAGGTGGATACTAATACAGTTCCGAATTTGTCTGCATTTCAAGGGATGTTACCTCCGATGCCACCTGGCTGGAAGCCGGGAATGCCTGTGCAATTGCCTATTGATTTGCCTCTTCCCCCGCCTGGGTGGAAACCAGGGGATCCTGTGCCGTTGCCTCCCATGGACTCGCTTCAAATACCGAGATTTGCAGAGCAACAAATGCAACCTCACATTCCTCAGCCCAAGCAACCAGAAGTTATTCAAGTGCAGCCAGTTAATTTGGACCTTGGAGGAAGTGATACTAGTGATTATAGTAGTGATGATGCCAGCTCTGATGATGAAGATTGA
Predicted protein sequences of Glyma.06g188800
>Glyma.06g188800.1.p sequence-type=predicted peptide transcript=Glyma.06g188800.1 locus=Glyma.06g188800 id=Glyma.06g188800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLQHQIVQSPAMLGLANPNSPSIPNPTPPKLPPTQTHHPQDRNSSTPSSALLSLLPPHLRAQALLAQMASLASKLFEVSPNRSLWVTAFRGSLPTFLSSHSSTPLDTSPSDGKEIISLFTVLQTQIFEAIAELQEILDLQDAKQKIDCEIHSQDSTLLAFANKLKEAESCLDILVDDYSDYHRSKRSKSGDDDSMTSSTISSQLKLSDMLSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKEVETKEKIVEAIVEPPPQVDTNTVPNLSAFQGMLPPMPPGWKPGMPVQLPIDLPLPPPGWKPGDPVPLPPMDSLQIPRFAEQQMQPHIPQPKQPEVIQVQPVNLDLGGSDTSDYSSDDASSDDED*

>Glyma.06g188800.3.p sequence-type=predicted peptide transcript=Glyma.06g188800.3 locus=Glyma.06g188800 id=Glyma.06g188800.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLQHQIVQSPAMLGLANPNSPSIPNPTPPKLPPTQTHHPQDRNSSTPSSALLSLLPPHLRAQALLAQMASLASKLFEVSPNRSLWVTAFRGSLPTFLSSHSSTPLDTSPSDGKEIISLFTVLQTQIFEAIAELQEILDLQDAKQKIDCEIHSQDSTLLAFANKLKEAESCLDILVDDYSDYHRSKRSKSGDDDSMTSSTISSQLKLSDMLSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKEVETKEKIVEAIVEPPPQVDTNTVPNLSAFQGMLPPMPPGWKPGMPVQLPIDLPLPPPGWKPGDPVPLPPMDSLQIPRFAEQQMQPHIPQPKQPEVIQVQPVNLDLGGSDTSDYSSDDASSDDED*






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