SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g187800

Feature Type:gene_model
Chromosome:Gm06
Start:16350513
stop:16356276
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g187800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11010.2AT JGI N/AIEA
2.7.1.78EC polynucleotide 5'-hydroxyl-kinase JGI N/AIEA
PTHR12755PantherFam CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P JGI N/AIEA
PTHR12755:SF3PantherFam POLYNUCLEOTIDE 5'-HYDROXYL-KINASE NOL9 JGI N/AIEA
PF16575Pfam mRNA cleavage and polyadenylation factor CLP1 P-loop JGI N/AIEA

Gene model name correspondences to Glyma.06g187800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g19970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g187800
>Glyma.06g187800.2 sequence-type=CDS polypeptide=Glyma.06g187800.2.p locus=Glyma.06g187800 id=Glyma.06g187800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTCCTATTACTCTTATATGTGGTGCCAAGAATTGTGCGAAGACAACCTTCTCCCGCTATCTCCTAAATGTCCTCTTGAACAAATACACCAAAGTAGCTTATCTGGATACTGATGTTGGCCAACCCGAGTTTACTCCTCCTGCTTTTCTGTCACTAACCATTGTTCATAAAGTAACTTCAGATTTGACAGTTCCATGCCTGAAAACACCGGAGAGGTGCCTTTTCTTTGGTGATGTTTCTTGTAAGAGAGATCCATCAACATACTTAAGTTATGTATTTGCCATATATAATTATTACCGAAAGGAGTATTGCATCTCAGATAAGGGAGAATATCCTCATAAGATCGAAGTTCCTCTTATCGTGAATACTCCTGGTTGGGTGAAAGGTCCCAAGTTCTGA
Predicted protein sequences of Glyma.06g187800
>Glyma.06g187800.2.p sequence-type=predicted peptide transcript=Glyma.06g187800.2 locus=Glyma.06g187800 id=Glyma.06g187800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPPITLICGAKNCAKTTFSRYLLNVLLNKYTKVAYLDTDVGQPEFTPPAFLSLTIVHKVTSDLTVPCLKTPERCLFFGDVSCKRDPSTYLSYVFAIYNYYRKEYCISDKGEYPHKIEVPLIVNTPGWVKGPKF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo