SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g176900

Feature Type:gene_model
Chromosome:Gm06
Start:14927213
stop:14929125
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g176900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G20360.1AT ATRAB8D,ATRABE1B,RABE1b JGI N/AIEA
3.6.5.3EC protein-synthesizing GTPase JGI N/AIEA
GO:0005525GO-mf GTP binding JGI N/AIEA
K02358KEGG Exosome JGI N/AIEA
PTHR23115PantherFam TRANSLATION FACTOR JGI N/AIEA
PF00009Pfam Elongation factor Tu GTP binding domain JGI N/AIEA
PF03143Pfam Elongation factor Tu C-terminal domain JGI N/AIEA
PF03144Pfam Elongation factor Tu domain 2 JGI N/AIEA

Proteins Associated with Glyma.06g176900
LocusGene SymbolProtein Name
TUFA elongation factor Tu, chloroplastic

Gene model name correspondences to Glyma.06g176900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g18640 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g176900
>Glyma.06g176900.1 sequence-type=CDS polypeptide=Glyma.06g176900.1.p locus=Glyma.06g176900 id=Glyma.06g176900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAGTTTCTTCAGCAACAGCTTCCTCCAAACTCATACTATTCCCCCATGCATCATCATCCTCTTCCCTTAATTCCACACCCTTCCGCTCCTCCACCACCAACACCCACAAACTAACCCCTCTCTCCTCCTCCTTCCTCCACCCCACCACCGTCCTCCGCCGCACCCCTTCTTCCACCACCACCCCGCGTCGCACCTTCACCGTCCGCGCCGCCCGCGGCAAATTCGAGCGCAAGAAGCCCCACGTGAACATCGGCACCATCGGCCACGTCGACCACGGCAAGACCACCCTTACCGCCGCCCTGACCATGGCTCTTGCCGCCCTAGGCAACAGCGCCCCCAAAAAATACGACGAGATCGACGCCGCCCCGGAGGAACGCGCCCGAGGCATCACCATCAACACCGCCACCGTGGAGTACGAGACCGAGAACCGCCACTACGCCCACGTGGACTGCCCCGGCCACGCTGACTACGTGAAAAACATGATCACCGGCGCAGCCCAAATGGACGGCGCCATATTAGTCGTCTCCGGCGCCGACGGCCCCATGCCCCAAACCAAAGAACACATCCTCTTAGCGAAACAAGTCGGTGTCCCCAACATGGTCGTGTTCTTAAACAAGCAAGACCAAGTCGACGACGAAGAGCTTCTCCAACTAGTGGAGCTCGAAGTCCGCGACCTTCTGAGCTCCTACGAATTCCCCGGTGACGATACCCCCATTGTCTCGGGCTCCGCGCTCTTAGCCCTAGAAGCACTCATGGCCAACCCTGCAATCAAACGCGGCGACAACGAGTGGGTCGACAAGATTTTCCAACTCATGGACGAGGTCGACAACTACATTCCCATCCCCCAGCGCCAGACCGACCTCCCCTTCCTCCTCGCCGTCGAAGACGTCTTTTCCATCACCGGCCGTGGCACCGTCGCCACTGGCCGTGTAGAGCGTGGCACCATCAAAGTAGGGGAAACTGTTGACCTTGTAGGTTTGAGAGAAACAAGGAACACAACCGTCACAGGTGTAGAAATGTTCCAGAAGATTCTAGACGAAGCCCTGGCTGGAGACAACGTGGGGCTGTTGCTTAGAGGGGTTCAGAAGACTGACATTCAGAGGGGAATGGTGTTGGCTAAACCAGGCACGATTACGCCGCACACCAAGTTCTCAGCGATTGTTTATGTTTTGAAGAAAGAAGAAGGTGGTAGGCATTCACCTTTCTTTGCAGGGTATAGGCCTCAGTTTTACATGAGGACCACCGATGTGACTGGGAAGGTTACGTCTATCATGAATGATAAGGATGAGGAGTCCACGATGGTGCTGCCCGGTGACCGTGTCAAGATGGTGGTGGAGCTTATTGTTCCTGTGGCTTGCGAACAGGGAATGAGGTTTGCTATTAGGGAAGGTGGGAAGACCGTTGGTGCTGGTGTTATCCAATCCATTATTGAGTGA
Predicted protein sequences of Glyma.06g176900
>Glyma.06g176900.1.p sequence-type=predicted peptide transcript=Glyma.06g176900.1 locus=Glyma.06g176900 id=Glyma.06g176900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVSSATASSKLILFPHASSSSSLNSTPFRSSTTNTHKLTPLSSSFLHPTTVLRRTPSSTTTPRRTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRDLLSSYEFPGDDTPIVSGSALLALEALMANPAIKRGDNEWVDKIFQLMDEVDNYIPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo