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Report for Sequence Feature Glyma.06g148700

Feature Type:gene_model
Chromosome:Gm06
Start:12104053
stop:12111808
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g148700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G09880.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K13091KEGG Spliceosome JGI N/AIEA
KOG0124 KOG Polypyrimidine tract-binding protein PUF60 (RRM superfamily) JGI N/AIEA
KOG0131 KOG Splicing factor 3b, subunit 4 JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF13893Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF15519Pfam linker between RRM2 and RRM3 domains in RBM39 protein JGI N/AIEA

Gene model name correspondences to Glyma.06g148700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g15370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g148700
>Glyma.06g148700.1 sequence-type=CDS polypeptide=Glyma.06g148700.1.p locus=Glyma.06g148700 id=Glyma.06g148700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACTTCGACGAGTACGATTACTTGGAGAAAACAGTGGAGGAGCAAGAGGACCACGACAGCAGCCGGAAGAAGAAGGAGAGCGAGAGGAGCTACAGGAAGCGCGAGGAGATCGACGAGGGAATCGAAGAGACGAAGAGCAAGAGGTCCAGGGGCGACGAAGAGAACGGCTCCAAGAAGGATAAGGACCGCGAAGAACGCGACAGGGAGCGCCGCAGGGACAGGGATAGAGATGGTGAGAGAAGTAGCAGAGACAGGGATAGGGATAGGGATAGGGAGAAGGAGAGAGAGAAAGGGAGGGAACGGAGGGAAAAGGATAAAGAGAGGGAGAAGAGGGAGAAGGAGAAAGAGAAGGAGAAGGAGAGGGAAAGAGAAAGAAGGGAGAGGGAACGGGAACGGGAAGAGAGAGAGAGGTCTCGGAGGAGTAGGAGTCGTTCCGAGAGAGAAAGAGAAAGAGAACGGGATTTCGACACCAGAGATAGCAGGAGATTTAGGGACAAAAAAGAGGCAGCGGAGCCCGAGGCAGATCCAGAAAGGGATCAGAGAACTGTTTTTGCTTACCAGATGCCCTTAAAGGCATCGGAGAGGGATGCTTATGAATTCTTCTCAAAAGCTGGCAAGGTGAGGGATGTCCGTCTGATCATGGATAGGAACTCAAGACGATCTAAAGGAGTTGGGTATATTGAGTTTTATGATGCAATGTCAGTGCCAATGGCAATTGCTCTCTCTGGCCAACTTCTTCTAGGACAACCTGTAATGGTCAAGCCTTCTGAGGCTGAAAAGAACCTTGTCCAATCTAATGCTACCAGTGGAGCTGCTGGAGTAGTAGGACCATATGGAGCTGTGGACAGGAAACTATATGTGGGGAACCTTCACTTTAACATGACGGAGAGTCAATTGAGAGAGATTTTTGAGCCATTTGGTCCGGTAGAGATTGTACAACTACCTCTTGACTTGGAGATGGGACATTGCAAGGGCTTTGGGTTTGTTCAATTTGCCCATCTTGAGCATGCCAAGGCTGCGCAGAGTTTAAATGGAAAATTGGAAATTGCTGGCAGGACTATAAAGGTTTCATCTGTAACAGATCATGTTGGAAACCAAGATACAACTGCCAAATCTGCAGATTTTGATGATGATGAAGGTGGATTGTCTTTAAATGCCCAATCAAGAGCATTGCTTATGCAGAAGCTGGACCGCTCTGGCATTGCTGCAAGCATTGGTCTGCCCATTGCGAATGGGTCATCTCCTGCTCAACAGGCTATTATGCCTATTGGTAATCCAGGTATAGTACCAGCAGTTGCACCAGCTGTCCCAACACAAATTATGCCTATCCCAGTGACTGAACCTGTTGGAAACCCCAGTGAGTGTTTACTGTTGAAGAACATGTTTGATCCAAACACTGAGACCGAACCAGATTTTGATCTAGACATTAAAGAGGATGTAGAAGAAGAGTGTTCCAAATATGGACGAGTGAAGCATATTTATGTTGACAAAAGAAGTGCAGGTTTTGTGTATTTGCAGTTTGAAACAGTGGAAGCAGCAAGTGCTGCTCAACGTGCAATGCACACAAGGTGGTTTGCAGGCAGAATGATATCTGCTATCTATATGCTACCTCAGATGTATGAAACCAAATTTAAAGGTGACGCTTGA
Predicted protein sequences of Glyma.06g148700
>Glyma.06g148700.1.p sequence-type=predicted peptide transcript=Glyma.06g148700.1 locus=Glyma.06g148700 id=Glyma.06g148700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDFDEYDYLEKTVEEQEDHDSSRKKKESERSYRKREEIDEGIEETKSKRSRGDEENGSKKDKDREERDRERRRDRDRDGERSSRDRDRDRDREKEREKGRERREKDKEREKREKEKEKEKERERERREREREREERERSRRSRSRSERERERERDFDTRDSRRFRDKKEAAEPEADPERDQRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVVGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEIVQLPLDLEMGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHVGNQDTTAKSADFDDDEGGLSLNAQSRALLMQKLDRSGIAASIGLPIANGSSPAQQAIMPIGNPGIVPAVAPAVPTQIMPIPVTEPVGNPSECLLLKNMFDPNTETEPDFDLDIKEDVEEECSKYGRVKHIYVDKRSAGFVYLQFETVEAASAAQRAMHTRWFAGRMISAIYMLPQMYETKFKGDA*






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