Glyma.06g144100

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Report for Sequence Feature Glyma.06g144100

Feature Type:	gene_model
Chromosome:	Gm06
Start:	11736263
stop:	11743912
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.06g144100

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G56310.1	AT	Melibiase family protein	JGI	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	EnsemblGenomes	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	EnsemblGenomes	N/A	IEA
GO:0009505	GO-cc	plant-type cell wall	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0004553	GO-mf	hydrolase activity, hydrolyzing O-glycosyl compounds	EnsemblGenomes	N/A	IEA
GO:0004553	GO-mf	hydrolase activity, hydrolyzing O-glycosyl compounds	JGI	N/A	IEA
GO:0004557	GO-mf	alpha-galactosidase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016798	GO-mf	hydrolase activity, acting on glycosyl bonds	EnsemblGenomes	N/A	IEA
GO:0052692	GO-mf	raffinose alpha-galactosidase activity	EnsemblGenomes	N/A	IEA
KOG2366	KOG	Alpha-D-galactosidase (melibiase)	JGI	N/A	IEA
PTHR11452	Panther	ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE	JGI	N/A	IEA
PF02065	PFAM	Melibiase	JGI	N/A	IEA
GN7V-58340	SoyCyc9-rxn	α-galactosidase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.06g144100

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g144100 not represented in the dataset	Glyma.06g144100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.06g144100 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma06g14920	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.06g144100

Limit To All Plant Sequences

>Glyma.06g144100.2 sequence-type=transcript locus=Glyma.06g144100 ID=Glyma.06g144100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAAtctctctctctctctctctctctcCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAGAGACCTTCAGCCTTGAAATCATTAAGCGGCAGAAACCTCCAACAGTTCTTTAGCAATTTTAATGCATTCTGTCATGGAGCAATGTCTTATTGCATTTGTTGCTATGTGAGACCTGCTTGCGGCATAACCCTTCTGCTACATGCCAACACAGAAGCCAAGTAAATGTCTGTTTTTTTTTTCTAAAGCTTTAAGGACTAAAACAAAAAACTGGCACAATATAGGTACTAAAGATTAATTAAACTTAATAAAAAATAGGCGTGCAAGAA

>Glyma.06g144100.3 sequence-type=transcript locus=Glyma.06g144100 ID=Glyma.06g144100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAAtctctctctctctctctctctctcCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAGTGATTAGACTTAAAATGATGCCATAAGTAATGCATGTCCTTATTATCATTTTTTTCTTTTTTGATGACAAAACAAACCATTTCATTATCAATTGGATTATCAATAACTTTAAGG

Coding sequences of Glyma.06g144100

Limit To All Plant Sequences

>Glyma.06g144100.1 sequence-type=CDS polypeptide=Glyma.06g144100.1.p locus=Glyma.06g144100 ID=Glyma.06g144100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGTACATTTTTGCTCCATTTACAGTATCCCACTCTGTAGAGTAG

>Glyma.06g144100.2 sequence-type=CDS polypeptide=Glyma.06g144100.2.p locus=Glyma.06g144100 ID=Glyma.06g144100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAG

>Glyma.06g144100.3 sequence-type=CDS polypeptide=Glyma.06g144100.3.p locus=Glyma.06g144100 ID=Glyma.06g144100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAG

Predicted protein sequences of Glyma.06g144100

Limit To All Plant Sequences

>Glyma.06g144100.1.p sequence-type=predicted peptide transcript=Glyma.06g144100.1 locus=Glyma.06g144100 ID=Glyma.06g144100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLYIFAPFTVSHSVE*

>Glyma.06g144100.2.p sequence-type=predicted peptide transcript=Glyma.06g144100.2 locus=Glyma.06g144100 ID=Glyma.06g144100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQL*

>Glyma.06g144100.3.p sequence-type=predicted peptide transcript=Glyma.06g144100.3 locus=Glyma.06g144100 ID=Glyma.06g144100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLISRVSNHAHQ*

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