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Report for Sequence Feature Glyma.06g137200

Feature Type:gene_model
Chromosome:Gm06
Start:11232269
stop:11234491
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g137200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G54160.1AT O-methyltransferase 1 JGI N/AIEA
GO:0019438GO-bp aromatic compound biosynthetic process EnsemblGenomesN/AIEA
GO:0032259GO-bp methylation EnsemblGenomesN/AIEA
GO:0008168GO-mf methyltransferase activity EnsemblGenomesN/AIEA
GO:0008171GO-mf O-methyltransferase activity EnsemblGenomesN/AIEA
GO:0008171GO-mf O-methyltransferase activity JGI N/AIEA
GO:0008757GO-mf S-adenosylmethionine-dependent methyltransferase activity EnsemblGenomesN/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0046983GO-mf protein dimerization activity EnsemblGenomesN/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
KOG3178 KOG Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases JGI N/AIEA
PTHR11746Panther O-METHYLTRANSFERASE JGI N/AIEA
PF00891PFAM O-methyltransferase JGI N/AIEA
PF08100PFAM Dimerisation domain JGI N/AIEA
PWY-1121SoyCyc9 suberin monomers biosynthesis Plant Metabolic Network ISS
PWY-2181SoyCyc9 free phenylpropanoid acid biosynthesis Plant Metabolic Network ISS
PWY-7186SoyCyc9 superpathway of scopolin and esculin biosynthesis Plant Metabolic Network ISS
PWY-7498SoyCyc9 phenylpropanoids methylation (ice plant) Plant Metabolic Network ISS
GN7V-57677SoyCyc9-rxn caffeate O-methyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.06g137200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.06g137200 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g14210 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g137200
>Glyma.06g137200.1 sequence-type=CDS polypeptide=Glyma.06g137200.1.p locus=Glyma.06g137200 ID=Glyma.06g137200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTTCAACAGGCGAGACTCAGATTACTCCAACTTATGTGTCCGATGAAGAGGCAAACTTATTCGCCATGCAACTAGCCAGTGCCTCTGTACTCCCTATGGTTCTCAAATCAGCTCTTGAACTTGATCTGTTGGAAATCATAGCCAAGGCTGGCCCTGGTGTTCACCTTTCCCCCACTGACATTGCTTCTCAGCTCCCAACACACAATCCTAACGCACCCGTGATGTTGGACCGCATATTGCGGCTCTTGGCTTGCTACAATATCCTTTCTTTTTCTCTTCGCACTCTCCCTGATTGCAAGATTGAGAGGCTCTATGGGCTCGCCCCAGTTGCTAAGTATTTGGTCAAGAATGAAGATGGTGTCTCCATTGCTGCGCTCAACCTCATGAACCAGGACAAAGTCCTCATGGAAAGCTGGTACTATTTGAAAGATGCAGTCCTTGAAGGAGGCATTCCATTTAACAAGGCTTATGGAATGACAGCCTTTGAGTACCATGGAACAGATCCAAGGTTTAACAAGGTTTTCAACAAGGGGATGGCTGATCACTCTACCATCACAATGAAGAAAATTCTTGAGACCTACACAGGTTTTGGCGGTCTTAAATCTCTAGTTGATGTTGGTGGTGGGACTGGAGCGATAATCAACATGATTGTCTCAAAGTATCCCACTATTAAGGGCATTAATTTTGATTTGCCTCATGTCATTGAAGATGCCACATCTTATCCAGGAGTGGAGCATGTCGGCGGAGATATGTTTGTGAGTGTTCCGAAAGCTGATGCTATTTTTATGAAGTGGATTTGCCACGATTGGAGTGATGAGCATTGCTTGAAGTTTTTGAAGAACTGCTATGAGGCACTTCCAGACAATGGGAAGGTGATTGTGGCAGAATGCATTCTTCCGGTGGCTCCAGACTTTAGCTTGGCCACAAAGGGTGTAGTTCACATTGATGTGATCATGTTGGCTCATAATCCAGGTGGAAAAGAGAGAACAGAGAAAGAGTTTGAGGCTTTGGCCAAAGGATCAGGATTCCAAGGTTTCCGAGTCCACTGTTGTGCTTTCAATACCTACGTAATGGAATTTCTCAAAAAGGAGGTTTAA
Predicted protein sequences of Glyma.06g137200
>Glyma.06g137200.1.p sequence-type=predicted peptide transcript=Glyma.06g137200.1 locus=Glyma.06g137200 ID=Glyma.06g137200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGSTGETQITPTYVSDEEANLFAMQLASASVLPMVLKSALELDLLEIIAKAGPGVHLSPTDIASQLPTHNPNAPVMLDRILRLLACYNILSFSLRTLPDCKIERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILETYTGFGGLKSLVDVGGGTGAIINMIVSKYPTIKGINFDLPHVIEDATSYPGVEHVGGDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDFSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVHCCAFNTYVMEFLKKEV*






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