Glyma.06g133700

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Report for Sequence Feature Glyma.06g133700

Feature Type:	gene_model
Chromosome:	Gm06
Start:	10995438
stop:	10999422
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.06g133700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G53580.1	AT	NAD(P)-linked oxidoreductase superfamily protein	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0016491	GO-mf	oxidoreductase activity	EnsemblGenomes	N/A	IEA
KOG1575	KOG	Voltage-gated shaker-like K+ channel, subunit beta/KCNAB	JGI	N/A	IEA
PTHR11732	Panther	ALDO/KETO REDUCTASE	JGI	N/A	IEA
PTHR11732:SF88	Panther		JGI	N/A	IEA
PF00248	PFAM	Aldo/keto reductase family	JGI	N/A	IEA
PWY-7204	SoyCyc9	pyridoxal 5'-phosphate salvage II (plants)	Plant Metabolic Network		ISS
GN7V-65942	SoyCyc9-rxn	pyridoxine 4-dehydrogenase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.06g133700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.06g133700 not represented in the dataset	Glyma.06g133700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.06g133700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma06g13880	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.06g133700

Limit To All Plant Sequences

>Glyma.06g133700.2 sequence-type=transcript locus=Glyma.06g133700 ID=Glyma.06g133700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTAAAACACAAACTAAACTGATCCATAACGAGATCGAGGATTCAATGGTTACCACACACAAAAAAAACACTAACTAACCAACCAACTGATTAACGTTGTGTTGGTAACTGTGTTCACTCACCTTGCAACAATGGCACTCTCAGTTTGCAGCATGAACATTAACCCCATAGCATTAGCAGCGCCATCTTTCTCATTCAAGTCTCTCAAATTCCCTTCCTTCTGGCCAACACAAAAGGTAAAAACAATTCATTTTCCTTTGATGTCATGTGTGGTGTGGTGTGATGAGTAGTAACAAGGTAACTTCAATGGTTGGTTGTTTGGTTGTGGCAGGTGAAGATGGGTCCTCTGAGTGTGTCTCCCATGGGATTTGGAACATGGGCATGGGGGAATCAGCTTCTGTGGGGGTACCAGGAATCCATGGATAATGAGCTCCAACAAATCTTCAACTTGGCTATGGACAACGGCATCAATCTCTTTGACACTGCTGATTCTTATGGCACGGGAAGGTTAAATGGTCAGAGCGAGAAGCTTCTGGGGAGGTTCATTCGAGAATTTCAAGAGCAAAAGGGGAGCCAACGTGAAATAGTCATTGCTACTAAGTTTGCAGCATACCCATGGCGCCTTACACCAGGGCAGTTTGTGAGTGCTTGCAGGGCATCACTAGATAGAATGCAAATTGAGCAAATTGGGATAGGACAACTTCATTGGTCAACTGCAAATTATGCTCCTTTGCAGGAATTTGCTCTTTGGGATGGTTTAGTGGCAATGTATGAGAAGGATTTAGTTAAAGCAGTTGGAGTAAGTAATTACGGACCAAAGCAGCTTTTAAAGATACATGATTATCTGAAAGACCGTGGAGTCCCCTTGTGTTCAGCCCAGGTGCAATTTTCCCTGTTGAGCACGGGGAAGGATCAACTAGAGATCAAGAGTATATGTGACAGTCTGGGTATTCGTATGATTGCTTATAGTCCTCTGGGACTTGGAATGCTTACTGGGAAATATTCATCATCCAAACTTCCAAGTGGGCCGAGGGCGTTGCTGTTTAAGCAAATTCTTCCGGGACTGGATCCTTTGTTGAGTTCGCTGAGAGAGATTGCAAATAAACGACGGAAAACCATGTCACAAGTTGCTATAAATTGGTGCATATGCAAAGGTACGGTTCCAATTCCTGGAGTTAAAACAATTAAACAAGCAGAGGAAAATTTAGGTGCTCTTGGTTGGCGCCTCTCCTCAGACGAGTTGCTTCAGTTGGAGGATGCAGCAAACGAATCACCTCGCAGGATGATCCAAAACATTTTCCAAACCAGATAAAACCTGTGGCGAGACCTCAGCACTCGGTTCGAAGGAATGCATACTTTTCACTCAATGATGGTCACTGGTTTGTATCATCTGGTATCATGAAAGGCAGAGAGCAAACAACCTTGACCAGGAGAATTGACAACGTACCACTCTATTGTGGCACATGGGCTTAAAACTAATGCGAAGAGTCCGTGACAGTGATGGTGCAACGTAGTTTTGGATAATCTCGTTGTCGGATAATATTGCTTTATTGTTAAAAATTATACTGACGGGTAGAAATGTACAATGAAATGATTCTATACTGACCAAAAGCCACGCTTACATTCACAAAAATTAAAAAAATCAGTTGCTTTCATATTCTTGCATTGAATCTAACGCG

Coding sequences of Glyma.06g133700

Limit To All Plant Sequences

>Glyma.06g133700.1 sequence-type=CDS polypeptide=Glyma.06g133700.1.p locus=Glyma.06g133700 ID=Glyma.06g133700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCACTCTCAGTTTGCAGCATGAACATTAACCCCATAGCATTAGCAGCGCCATCTTTCTCATTCAAGTCTCTCAAATTCCCTTCCTTCTGGCCAACACAAAAGGTGAAGATGGGTCCTCTGAGTGTGTCTCCCATGGGATTTGGAACATGGGCATGGGGGAATCAGCTTCTGTGGGGGTACCAGGAATCCATGGATAATGAGCTCCAACAAATCTTCAACTTGGCTATGGACAACGGCATCAATCTCTTTGACACTGCTGATTCTTATGGCACGGGAAGGTTAAATGGTCAGAGCGAGAAGCTTCTGGGGAGGTTCATTCGAGAATTTCAAGAGCAAAAGGGGAGCCAACGTGAAATAGTCATTGCTACTAAGTTTGCAGCATACCCATGGCGCCTTACACCAGGGCAGTTTGTGAGTGCTTGCAGGGCATCACTAGATAGAATGCAAATTGAGCAAATTGGGATAGGACAACTTCATTGGTCAACTGCAAATTATGCTCCTTTGCAGGAATTTGCTCTTTGGGATGGTTTAGTGGCAATGTATGAGAAGGATTTAGTTAAAGCAGTTGGAGTAAGTAATTACGGACCAAAGCAGCTTTTAAAGATACATGATTATCTGAAAGACCGTGGAGTCCCCTTGTGTTCAGCCCAGGTGCAATTTTCCCTGTTGAGCACGGGGAAGGATCAACTAGAGATCAAGAGTATATGTGACAGTCTGGGTATTCGTATGATTGCTTATAGTCCTCTGGGACTTGGAATGCTTACTGGGAAATATTCATCATCCAAACTTCCAAGTGGGCCGAGGGCGTTGCTGTTTAAGCAAATTCTTCCGGGACTGGATCCTTTGTTGAGTTCGCTGAGAGAGATTGCAAATAAACGACGGAAAACCATGTCACAAGTTGCTATAAATTGGTGCATATGCAAAGGTACGGTTCCAATTCCTGGAGTTAAAACAATTAAACAAGCAGAGGAAAATTTAGGTGCTCTTGGTTGGCGCCTCTCCTCAGACGAGTTGCTTCAGTTGGAGGATGCAGCAAACGAATCACCTCGCAGGATGATCCAAAACATTTTCCAAACCAGATAA

>Glyma.06g133700.2 sequence-type=CDS polypeptide=Glyma.06g133700.2.p locus=Glyma.06g133700 ID=Glyma.06g133700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTCCTCTGAGTGTGTCTCCCATGGGATTTGGAACATGGGCATGGGGGAATCAGCTTCTGTGGGGGTACCAGGAATCCATGGATAATGAGCTCCAACAAATCTTCAACTTGGCTATGGACAACGGCATCAATCTCTTTGACACTGCTGATTCTTATGGCACGGGAAGGTTAAATGGTCAGAGCGAGAAGCTTCTGGGGAGGTTCATTCGAGAATTTCAAGAGCAAAAGGGGAGCCAACGTGAAATAGTCATTGCTACTAAGTTTGCAGCATACCCATGGCGCCTTACACCAGGGCAGTTTGTGAGTGCTTGCAGGGCATCACTAGATAGAATGCAAATTGAGCAAATTGGGATAGGACAACTTCATTGGTCAACTGCAAATTATGCTCCTTTGCAGGAATTTGCTCTTTGGGATGGTTTAGTGGCAATGTATGAGAAGGATTTAGTTAAAGCAGTTGGAGTAAGTAATTACGGACCAAAGCAGCTTTTAAAGATACATGATTATCTGAAAGACCGTGGAGTCCCCTTGTGTTCAGCCCAGGTGCAATTTTCCCTGTTGAGCACGGGGAAGGATCAACTAGAGATCAAGAGTATATGTGACAGTCTGGGTATTCGTATGATTGCTTATAGTCCTCTGGGACTTGGAATGCTTACTGGGAAATATTCATCATCCAAACTTCCAAGTGGGCCGAGGGCGTTGCTGTTTAAGCAAATTCTTCCGGGACTGGATCCTTTGTTGAGTTCGCTGAGAGAGATTGCAAATAAACGACGGAAAACCATGTCACAAGTTGCTATAAATTGGTGCATATGCAAAGGTACGGTTCCAATTCCTGGAGTTAAAACAATTAAACAAGCAGAGGAAAATTTAGGTGCTCTTGGTTGGCGCCTCTCCTCAGACGAGTTGCTTCAGTTGGAGGATGCAGCAAACGAATCACCTCGCAGGATGATCCAAAACATTTTCCAAACCAGATAA

Predicted protein sequences of Glyma.06g133700

Limit To All Plant Sequences

>Glyma.06g133700.1.p sequence-type=predicted peptide transcript=Glyma.06g133700.1 locus=Glyma.06g133700 ID=Glyma.06g133700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MALSVCSMNINPIALAAPSFSFKSLKFPSFWPTQKVKMGPLSVSPMGFGTWAWGNQLLWGYQESMDNELQQIFNLAMDNGINLFDTADSYGTGRLNGQSEKLLGRFIREFQEQKGSQREIVIATKFAAYPWRLTPGQFVSACRASLDRMQIEQIGIGQLHWSTANYAPLQEFALWDGLVAMYEKDLVKAVGVSNYGPKQLLKIHDYLKDRGVPLCSAQVQFSLLSTGKDQLEIKSICDSLGIRMIAYSPLGLGMLTGKYSSSKLPSGPRALLFKQILPGLDPLLSSLREIANKRRKTMSQVAINWCICKGTVPIPGVKTIKQAEENLGALGWRLSSDELLQLEDAANESPRRMIQNIFQTR*

>Glyma.06g133700.2.p sequence-type=predicted peptide transcript=Glyma.06g133700.2 locus=Glyma.06g133700 ID=Glyma.06g133700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGPLSVSPMGFGTWAWGNQLLWGYQESMDNELQQIFNLAMDNGINLFDTADSYGTGRLNGQSEKLLGRFIREFQEQKGSQREIVIATKFAAYPWRLTPGQFVSACRASLDRMQIEQIGIGQLHWSTANYAPLQEFALWDGLVAMYEKDLVKAVGVSNYGPKQLLKIHDYLKDRGVPLCSAQVQFSLLSTGKDQLEIKSICDSLGIRMIAYSPLGLGMLTGKYSSSKLPSGPRALLFKQILPGLDPLLSSLREIANKRRKTMSQVAINWCICKGTVPIPGVKTIKQAEENLGALGWRLSSDELLQLEDAANESPRRMIQNIFQTR*

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