SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g125500

Feature Type:gene_model
Chromosome:Gm06
Start:10200751
stop:10205483
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g125500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G53210.1AT SPCH JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
PTHR11514PantherFam MYC JGI N/AIEA
PF00010Pfam Helix-loop-helix DNA-binding domain JGI N/AIEA

Proteins Associated with Glyma.06g125500
LocusGene SymbolProtein Name
SPCH2 transcription factor SPEECHLESS-like

Gene model name correspondences to Glyma.06g125500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g13081 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g125500
>Glyma.06g125500.1 sequence-type=CDS polypeptide=Glyma.06g125500.1.p locus=Glyma.06g125500 id=Glyma.06g125500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACGATAATAGCTTATGCGATATTTTCGACGACAAAGAGTTTGGGAGCGACCATTTTGGTGGGGATGATCTCTTCGCCATTTTGGAGAGCCTAGAATCGGACTTCACCACCGATTTCCCTCCTCTCATTAACGAAGAAGCTGTTGTTGCAGCAGCTGTCTCCAAAGACATTAATAACGAGGATGTCTCAAGATTGGTGTCTCAAAAGTCAACCTCTTCAAGTGCTCCACTAGATTCCGAAACTGAGCTTGAAACCTCTCCCAAAACCAAGAGACAGAAGCTTACTCCTACTACTCCTGAGGAAGCAAACCCAGATGGACAACAAAAGATGTCTCACATTACCGTTGAACGCAACAGGAGAAAGCAAATGAACGAACACTTGACCGTGTTGAGGTCGCTTATGCCTTGCTTTTATGTCAAAAGGGGAGATCAAGCATCGATAATTGGAGGAGTGGTTGATTACATCAGCGAGTTGCAGCAGGTGCTGCAAGCCCTGGAGGCCAAGAAGCAAAGAAAAGTCTACTGCGAAGTCCTGAGCCCTAGGCTTGTTTCAAGCCCAAGGCCTTCACCACTGAGTCCTAGGAAGCCCCCTTTAAGCCCGAGACTAAACTTGCCTATAAGCCCAAGAACTCCACAACCAGGAAGCCCTTACAGGCCAAGGCTGCATCAGCAGCAGCATGGCTACAACAACATCATTTCACCAACCATATCCAACGTCTCTCTCGACCCTTCTCCCACTTCTTCTGCCAACTCCTCCATCAACGATAACATCAACGAGCTTGTTGCAAACTCCAAGTCCCCCACTGCTGACGTGGAGGTCAAGTTTTCGGGTCCTCATGTTCTTCTCAAAACGGTGTCTCAACGAATTCCAGGGCAGGCTCTGAAGATTATAACGGCACTTGAAGATCTTGCGCTTGAAATCGTTCATGTCAACATTAACTGTGCTGCGGATGATACCATGCTAAACTCATTCACTATCAAGATTGGAATTGAATGCCAACTCAGTGCCGAAGAACTCGCTCAACAAATCCAGCAAACATTCTACTAA
Predicted protein sequences of Glyma.06g125500
>Glyma.06g125500.1.p sequence-type=predicted peptide transcript=Glyma.06g125500.1 locus=Glyma.06g125500 id=Glyma.06g125500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDDNSLCDIFDDKEFGSDHFGGDDLFAILESLESDFTTDFPPLINEEAVVAAAVSKDINNEDVSRLVSQKSTSSSAPLDSETELETSPKTKRQKLTPTTPEEANPDGQQKMSHITVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVDYISELQQVLQALEAKKQRKVYCEVLSPRLVSSPRPSPLSPRKPPLSPRLNLPISPRTPQPGSPYRPRLHQQQHGYNNIISPTISNVSLDPSPTSSANSSINDNINELVANSKSPTADVEVKFSGPHVLLKTVSQRIPGQALKIITALEDLALEIVHVNINCAADDTMLNSFTIKIGIECQLSAEELAQQIQQTFY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo