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Report for Sequence Feature Glyma.06g116000

Feature Type:gene_model
Chromosome:Gm06
Start:9404782
stop:9410696
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g116000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G21690.1AT EMB1968,RFC4 JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
K10755KEGG DNA repair and recombination proteins JGI N/AIEA
KOG0989 KOG Replication factor C, subunit RFC4 JGI N/AIEA
PTHR11669PantherFam REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT JGI N/AIEA
PF00004Pfam ATPase family associated with various cellular activities (AAA) JGI N/AIEA
PF08542Pfam Replication factor C C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.06g116000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g12210 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g116000
>Glyma.06g116000.1 sequence-type=CDS polypeptide=Glyma.06g116000.1.p locus=Glyma.06g116000 id=Glyma.06g116000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGCCAATCCTGCAGAGCTCTCAGCCATGGGTCGAGAAATACCGGCCAAAGCAAGTGAAAGATGTTGCCCACCAAGATGAAGTTGTTCGAGTACTAACAAACACCCTTGAAACTGGAAGTTGCCCCCACATGCTCTTCTATGGTCCTCCTGGCACGGGAAAAACAACTACTGCCCTTGCTATCGCCCATCAGCTTTTTGGTCCTGAGCTATATAAGTCTAGGGTGCTGGAGTTGAATGCAAGTGACGATAGAGGGATTAATGTTGTTCGAACAAAGATAAAAGATTTTGCTGCTGTTGCTGTTGGTACTAATCAGTGTAAAAATGGTTATCCTTGTCCACCATTTAAGATTATTGTTCTAGACGAGGCAGATTCAATGACTGAAGATGCTCAGAATGCCCTGAGGCGTACAATGGAAACTTACTCTAAAGTTACAAGGTTCTTTTTTATATGCAACTATGTTAGCAGGATTATAGAACCACTTGCTTCAAGGTGTGCAAAATTCAGGTTCAAACCATTATCAGAAGAAATCATGAGCAGCCGGATATTATACATCTCCCAAGAAGAGGGACTCTGTCTTGATGCTGAGGCTCTTTCAACCCTGAGTTTTATTTCTCATGGAGATCTTCGCCGGGCAATCACATACTTGCAGTCTGCAGCTCGCTTATTTGGATCTTCAATTTCTTCAGAGAATCTGATTTCTGTGTCAGGGGTTGTTCCGGCAAAGGTTGTGGAGGCACTTCTTAAAGCTTGCAAAAGTGGTAATTTTGATTTGGCAAACAAGGAAGTCAACAATTTCATTGCAGAGGGATATCCAGCTTCTCAGATGCTTACTCAGTTATTTGAGGCCATTGTTGAAGAAAATGACTTATCTGATGAACAGAAAGCAAGAATATCAAAGAAGCTGGGTGAAGCTGATAAGTGCTTAGTTGACGGTGCTGATGAATACTTGCAACTTCTTGATGTGGTCAGCAATACGATTAAAGCTTTTAACAGCTTGCCAGAAGCATTTGCTTACGAATGTTAG

>Glyma.06g116000.2 sequence-type=CDS polypeptide=Glyma.06g116000.2.p locus=Glyma.06g116000 id=Glyma.06g116000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGCCAATCCTGCAGAGCTCTCAGCCATGGGTCGAGAAATACCGGCCAAAGCAAGTGAAAGATGTTGCCCACCAAGATGAAGTTGTTCGAGTACTAACAAACACCCTTGAAACTGGAAGTTGCCCCCACATGCTCTTCTATGGTCCTCCTGGCACGGGAAAAACAACTACTGCCCTTGCTATCGCCCATCAGCTTTTTGGTCCTGAGCTATATAAGTCTAGGGTGCTGGAGTTGAATGCAAGTGACGATAGAGGGATTAATGTTGTTCGAACAAAGATAAAAGATTTTGCTGCTGTTGCTGTTGGTACTAATCAGTGTAAAAATGGTTATCCTTGTCCACCATTTAAGATTATTGTTCTAGACGAGGCAGATTCAATGACTGAAGATGCTCAGAATGCCCTGAGGCGTACAATGGAAACTTACTCTAAAGTTACAAGGTTCTTTTTTATATGCAACTATGTTAGCAGGATTATAGAACCACTTGCTTCAAGGTGTGCAAAATTCAGGTTCAAACCATTATCAGAAGAAATCATGAGCAGCCGGATATTATACATCTCCCAAGAAGAGGGACTCTGTCTTGATGCTGAGGCTCTTTCAACCCTGAGTTTTATTTCTCATGGAGATCTTCGCCGGGCAATCACATACTTGCAGTCTGCAGCTCGCTTATTTGGATCTTCAATTTCTTCAGAGAATCTGATTTCTGTGTCAGGGGTTGTTCCGGCAAAGGTTGTGGAGGCACTTCTTAAAGCTTGCAAAAGTGGTAATTTTGATTTGGCAAACAAGGAAGTCAACAATTTCATTGCAGAGGGATATCCAGCTTCTCAGATGCTTACTCAGAAAGCAAGAATATCAAAGAAGCTGGGTGAAGCTGATAAGTGCTTAGTTGACGGTGCTGATGAATACTTGCAACTTCTTGATGTGGTCAGCAATACGATTAAAGCTTTTAACAGCTTGCCAGAAGCATTTGCTTACGAATGTTAG
Predicted protein sequences of Glyma.06g116000
>Glyma.06g116000.1.p sequence-type=predicted peptide transcript=Glyma.06g116000.1 locus=Glyma.06g116000 id=Glyma.06g116000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPAKVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAYEC*

>Glyma.06g116000.2.p sequence-type=predicted peptide transcript=Glyma.06g116000.2 locus=Glyma.06g116000 id=Glyma.06g116000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNGYPCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPAKVVEALLKACKSGNFDLANKEVNNFIAEGYPASQMLTQKARISKKLGEADKCLVDGADEYLQLLDVVSNTIKAFNSLPEAFAYEC*






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