SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g113500

Feature Type:gene_model
Chromosome:Gm06
Start:9183782
stop:9189169
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g113500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G44446.1AT ATCAO,CAO,CH1 JGI N/AIEA
1.14.13.122EC chlorophyllide-a oxygenase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0010277GO-mf chlorophyllide a oxygenase [overall] activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0051537GO-mf 2 iron, 2 sulfur cluster binding JGI N/AIEA
K13600KEGG Porphyrin and chlorophyll metabolism JGI N/AIEA
PTHR21266PantherFam IRON-SULFUR DOMAIN CONTAINING PROTEIN JGI N/AIEA
PTHR21266:SF19PantherFam CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC JGI N/AIEA
PF00355Pfam Rieske [2Fe-2S] domain JGI N/AIEA
PF08417Pfam Pheophorbide a oxygenase JGI N/AIEA

Gene model name correspondences to Glyma.06g113500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g11920 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g113500
>Glyma.06g113500.1 sequence-type=CDS polypeptide=Glyma.06g113500.1.p locus=Glyma.06g113500 id=Glyma.06g113500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACGCCATTGCAACTGCTGCACTTCTCTCTCTCCCTTTCTCCTTCTCCAAATCATCCAAGCTTGACACCAAAAAGGGTTTGAAAGGAAGGTTTAGAGTGTTTGCTGTATATGGAGAAGAGATAGATAAGAAGAGTACATGGAGTGCGCTCTTTGATGTGGAGGATCCAAGATCCAAAGTGCCGCAGTATAAAGGGAAGTTTTTGGATGTATATCAAGCCCTTGAATTTGCAAGATATGATATTCAATACTGTGATTGGCGAGCTCGCCAAGACTTGCTTGCCATCATGCTTCTCCATGAAAAGGTGGTGGAGGTTCTTAATCCTTTAGCTCGTGATTATAAGTCCATTGGCACCATGAAAAAGGAGCTAGCAGGGTTGCAGGAAGAATTGGCACTAGCACACCAACAGGTTCATATATCTGAGGCAAGGGTGTCCACTGCTTTAGATAAACTAGCTTACATGGAAGAATTAGTAAACGATAAGTTGTTGCAAGAAAGAACCACAACCGAAGTTTCCCAGACATCCTCTTCTCCCAGTACTTCTTTTAAACCTGTAGATGTAGAAAAGAGAAGACCGCCACGAAAAAGCTTGGACATATCAGGTCCAGTTCAGTCATACCATACCCACTTGAAGAATTTCTGGTACCCTGTAGCTTTCTCTACTGACTTGAAGGATGATACAATGATCCCAATAGAATGTTTTGAGGAACCATGGGTCATTTTTCGAGGGAAAGATGGGAAGCCTGGATGTGTTCAAAATACCTGCGCACACAGAGCATGCCCTCTGCACCTTGGTTCTGTGAAGGAGGGTCGTATCCAATGTCCTTACCATGGCTGGGAATATACTACTGATGGAAAATGTGAGAAAATGCCATCTACTCGACTGCTAAATGTGAAGATAAAGTCATTGCCATGTTTTGAAAAAGAGGGAATGATCTGGGTTTGGCCTGGCAATGACCCCCCAACAGCTACCCTTCCATCTTTGCTACCTCCGTCTGGGTTTGAAGTGCATGCTGAGATTGTCATGGAGCTTCCCATCGAACATGGGTTACTTTTGGACAACCTTTTGGATCTTGCACATGCCCCTTTTACTCACACTTCAACTTTTGCTAAGGGATGGAGTGTTCCCAGCTTGGTGAAATTCTTGACACCTGCATCTGGCCTACAAGGATACTGGGACCCCTATCCAATTGATATGGAGTTTCGACCACCTTGCATGGTTCTATCAACCATTGGAATTTCAAAGCCTGGTAAACTGGAAGGACAAAGCACCAGTCAGTGTGCCACACACCTGCACCAACTTCATGTCTGCTTACCATCTTCAAAACAAAAAACAAGATTGCTATACAGAATGTCACTGGATTTTGCTCCTGTGCTTAAGCATATTCCTTTTATGCAACATCTATGGAGATATTTTGCAGAGCAGGTTTTAAACGAGGATCTACGGCTAGTGTTAGGCCAGCAAGAGCGGATGAACAACGGTGCAAATGTGTGGAATTTCCCAGTATCCTATGACAAGCTTGGGGTAAGGTACAGACTATGGAGAAATGCCTTGGAGCAAGGAACTAAGCAACCACCCTTCAGCAAATGA

>Glyma.06g113500.3 sequence-type=CDS polypeptide=Glyma.06g113500.3.p locus=Glyma.06g113500 id=Glyma.06g113500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACGCCATTGCAACTGCTGCACTTCTCTCTCTCCCTTTCTCCTTCTCCAAATCATCCAAGCTTGACACCAAAAAGGGTTTGAAAGGAAGGTTTAGAGTGTTTGCTGTATATGGAGAAGAGATAGATAAGAAGAGTACATGGAGTGCGCTCTTTGATGTGGAGGATCCAAGATCCAAAGTGCCGCAGTATAAAGGGAAGTTTTTGGATGTATATCAAGCCCTTGAATTTGCAAGATATGATATTCAATACTGTGATTGGCGAGCTCGCCAAGACTTGCTTGCCATCATGCTTCTCCATGAAAAGGTGGTGGAGGTTCTTAATCCTTTAGCTCGTGATTATAAGTCCATTGGCACCATGAAAAAGGAGCTAGCAGGGTTGCAGGAAGAATTGGCACTAGCACACCAACAGGTTCATATATCTGAGGCAAGGGTGTCCACTGCTTTAGATAAACTAGCTTACATGGAAGAATTAGTAAACGATAAGTTGTTGCAAGAAAGAACCACAACCGAAGTTTCCCAGACATCCTCTTCTCCCAGTACTTCTTTTAAACCTGTAGATGTAGAAAAGAGAAGACCGCCACGAAAAAGCTTGGACATATCAGGTCCAGTTCAGTCATACCATACCCACTTGAAGAATTTCTGGTACCCTGTAGCTTTCTCTACTGACTTGAAGGATGATACAATGATCCCAATAGAATGTTTTGAGGAACCATGGGTCATTTTTCGAGGGAAAGATGGGAAGCCTGGATGTGTTCAAAATACCTGCGCACACAGAGCATGCCCTCTGCACCTTGGTTCTGTGAAGGAGGGTCGTATCCAATGTCCTTACCATGGCTGGGAATATACTACTGATGGAAAATGTGAGAAAATGCCATCTACTCGACTGCTAAATGTGAAGATAAAGTCATTGCCATGTTTTGAAAAAGAGGGAATGATCTGGGTTTGGCCTGGCAATGACCCCCCAACAGCTACCCTTCCATCTTTGCTACCTCCGTCTGGGTTTGAAGTGCATGCTGAGATTGTCATGGAGCTTCCCATCGAACATGGGTTACTTTTGGACAACCTTTTGGATCTTGCACATGCCCCTTTTACTCACACTTCAACTTTTGCTAAGGGATGGAGTGTTCCCAGCTTGGTGAAATTCTTGACACCTGCATCTGGCCTACAAGGATACTGGGACCCCTATCCAATTGATATGGAGTTTCGACCACCTTGCATGGTTCTATCAACCATTGGAATTTCAAAGCCTGGTAAACTGGAAGGACAAAGCACCAGTCAGTGTGCCACACACCTGCACCAACTTCATGTCTGCTTACCATCTTCAAAACAAAAAACAAGATTGCTATACAGAATGTCACTGGATTTTGCTCCTGTGCTTAAGCATATTCCTTTTATGCAACATCTATGGAGATATTTTGCAGAGCAGGTAGATTTTTTTTATATTCAGCATGCATTTTTATAA
Predicted protein sequences of Glyma.06g113500
>Glyma.06g113500.1.p sequence-type=predicted peptide transcript=Glyma.06g113500.1 locus=Glyma.06g113500 id=Glyma.06g113500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNAIATAALLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEEIDKKSTWSALFDVEDPRSKVPQYKGKFLDVYQALEFARYDIQYCDWRARQDLLAIMLLHEKVVEVLNPLARDYKSIGTMKKELAGLQEELALAHQQVHISEARVSTALDKLAYMEELVNDKLLQERTTTEVSQTSSSPSTSFKPVDVEKRRPPRKSLDISGPVQSYHTHLKNFWYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVKEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQVLNEDLRLVLGQQERMNNGANVWNFPVSYDKLGVRYRLWRNALEQGTKQPPFSK*

>Glyma.06g113500.3.p sequence-type=predicted peptide transcript=Glyma.06g113500.3 locus=Glyma.06g113500 id=Glyma.06g113500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNAIATAALLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEEIDKKSTWSALFDVEDPRSKVPQYKGKFLDVYQALEFARYDIQYCDWRARQDLLAIMLLHEKVVEVLNPLARDYKSIGTMKKELAGLQEELALAHQQVHISEARVSTALDKLAYMEELVNDKLLQERTTTEVSQTSSSPSTSFKPVDVEKRRPPRKSLDISGPVQSYHTHLKNFWYPVAFSTDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVKEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQVDFFYIQHAFL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo