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Report for Sequence Feature Glyma.06g112400

Feature Type:gene_model
Chromosome:Gm06
Start:9089751
stop:9095914
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g112400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G18340.1AT JGI N/AIEA
GO:0006289GO-bp nucleotide-excision repair JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0000439GO-cc transcription factor TFIIH core complex JGI N/AIEA
K03143KEGG DNA repair and recombination proteins JGI N/AIEA
KOG2487 KOG RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB4 JGI N/AIEA
PTHR12831PantherFam TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED JGI N/AIEA
PF03850Pfam Transcription factor Tfb4 JGI N/AIEA

Gene model name correspondences to Glyma.06g112400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g11810 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g112400
>Glyma.06g112400.2 sequence-type=CDS polypeptide=Glyma.06g112400.2.p locus=Glyma.06g112400 id=Glyma.06g112400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTTCTGCTTCTTCCAAACTCTACGCAGATGACGTGAGCCTCCTCGTTGTAACGCTAGACACCAACCCTTTCTTCTGGAGCACTTTCCCCTTCCCCTTCGCCGAGTTCCTCTCCCAAGTACTCGCTTTTCTCAACTCGATCTTGCTCCTTGGCCAGCTCAACCAGGTGATCGTCATCGCCACCGGATGCAACTCTTGCGGCTACATTTACGATTCCACTTCCGATAAGAACCATGGCTCCACCACCGGTACAATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGATGAGTTTCTCGCTAGGGACCGCCAATTAGATGCCGACGCGGCTCACGCACCGGGAACCGTTCCTTCTTCGCTGTTATCAGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGTTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATTTTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAGCAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGGTCTGTATTTGGCCAGGCTCAACTAGATGCCTCAGCAGCCGACCGGCAAAGAAAGGCTTGA

>Glyma.06g112400.3 sequence-type=CDS polypeptide=Glyma.06g112400.3.p locus=Glyma.06g112400 id=Glyma.06g112400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTTCTGCTTCTTCCAAACTCTACGCAGATGACGTGAGCCTCCTCGTTGTAACGCTAGACACCAACCCTTTCTTCTGGAGCACTTTCCCCTTCCCCTTCGCCGAGTTCCTCTCCCAAGTACTCGCTTTTCTCAACTCGATCTTGCTCCTTGGCCAGCTCAACCAGGTGATCGTCATCGCCACCGGATGCAACTCTTGCGGCTACATTTACGATTCCACTTCCGATAAGAACCATGGCTCCACCACCGGTACAATGCCCGCGCTTTATTCCAATTTACTTCACAATCTCGATGAGTTTCTCGCTAGGGACCGCCAATTAGATGCCGACGCGGCTCACGCACCGGGAACCGTTCCTTCTTCGCTGTTATCAGGCTCCTTGTCCATGGCGCTTTGTTATATACAGAGAGCTTTTCGTTCGGGACCAATGCCTCCTCAGCCTCGGATTTTATGTTTGCAAGGGGTTGCTGATGGACCAGAACAGTATGTGGCAATCATGAATGCAATTTTCTCTGCACAGCACTCTACAGTTCCTATAGATTCTTGTTATATTGGTTCAAACAATTCTGCATTCCTCCAGCAGGCTTCATACATAACTGGTGGAATATATTACAAGCCTCCCCAATTGGACGGGCTTTATCAATATCTTTCAACAGTGTTTGCAACTGATTTGCATTCTCGTGCATTTTTACGGCTTCCTAAATCTGTGGGTGTGGATTTTCGTGCCTCGTGTTTCTGCCATAAGCAAACAATTGACATGGGCTATGTGTGTTCTGTATGCTTATCCATATTCTGTGAGCACCATGATAAGTGTTCAACCTGTGGATTAGTCAGGGTCCTTTTCCCCTGA
Predicted protein sequences of Glyma.06g112400
>Glyma.06g112400.2.p sequence-type=predicted peptide transcript=Glyma.06g112400.2 locus=Glyma.06g112400 id=Glyma.06g112400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSASSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNSILLLGQLNQVIVIATGCNSCGYIYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADAAHAPGTVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGVADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAADRQRKA*

>Glyma.06g112400.3.p sequence-type=predicted peptide transcript=Glyma.06g112400.3 locus=Glyma.06g112400 id=Glyma.06g112400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSASSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNSILLLGQLNQVIVIATGCNSCGYIYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADAAHAPGTVPSSLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGVADGPEQYVAIMNAIFSAQHSTVPIDSCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGLVRVLFP*






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