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Report for Sequence Feature Glyma.06g085800

Feature Type:gene_model
Chromosome:Gm06
Start:6581980
stop:6586126
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g085800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G32810.1AT ATCCD8,CCD8,MAX4 JGI N/AIEA
1.13.11.69EC carlactone synthase JGI N/AIEA
1.13.11.70EC all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase JGI N/AIEA
K17913KEGG Carotenoid biosynthesis JGI N/AIEA
KOG1285 KOG Beta, beta-carotene 15,15'-dioxygenase and related enzymes JGI N/AIEA
PTHR10543PantherFam BETA-CAROTENE DIOXYGENASE JGI N/AIEA
PF03055Pfam Retinal pigment epithelial membrane protein JGI N/AIEA

Proteins Associated with Glyma.06g085800
LocusGene SymbolProtein Name
CCD8 carotenoid cleavage dioxygenase

Gene model name correspondences to Glyma.06g085800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g09000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g085800
>Glyma.06g085800.1 sequence-type=CDS polypeptide=Glyma.06g085800.1.p locus=Glyma.06g085800 id=Glyma.06g085800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTTCACCTTCTCGCCTTCAATCAGAAACTCCATTTCATGGCCAACTATGCTTGTTCCTGACATGCCTGATATCAATATCTCACTTCGAAATAAAGGCATCTACAAAGGGAAACGCAATATTAATCTGCGAGACTTGACCAAGGCAAATGTTGCAAGTCCATCATTACCTTTGATTGCCCCACCAACACCCGAGGAACGCCCAGGAATCACCCATGACTGCCACCACCACCACCATGTTGCATGGACTAGTATCCCGCAAGAGAGATGGGAAGGAGAGTTACAAGTTCAAGGGCAAATACCATTATGGCTGGAAGGAACGTACCTAAGGAATGGTCCGGGCATGTGGCACATAGGGGACTACAACTTCCGGCACCTCTTCGACGGTTACGCCACCCTGGTGAGGCTCGGTTTCCGGAACGGCCGGCTAGTCGCGGGGCACCGGCAAATCGAGTCGGAGGCGTACCGGGCGGCGAAGAAGAACAAGAAGATATGTTACAGGGAGTTCTCCGAGGTGCCTAAGGCTGCGAATTTCCTGGCCTACGTGGGGGAGCTGGCGAGCCTGTTCTCTGGCGCTTCCCTGACCGACAACGCGAACACCGGCGTGGTGAAACTCGGCGACGGCAGGGTGGTGTGCCTTACGGAGACTCAGAAAGGGTCCATAGTGATAGACCCTGAGACGTTGGAGACAGTGGGGAAGTTTGAGTACAGTGACTCGTTGGGGGGTCTTATTCACTCCGCACATCCCATTGTGACGGATGAAGAGTTTTTGACGTTGTTGCCTGATTTGGTGAGAGCAGGGTACCTTGTTGTTAGGATGGAGCCTGGTACCAATGAGAGGAGGGTCATTGGAAGGGTCAATTGTAGGGGTGGGCCTGCACCTGGTTGGGTTCATTCTTTTCCTGTTACTCAACATTATGTTGTTGTGCCTGAAATGCCGTTGAGGTACTGTGCTCAGAATTTGCTCAAAGCTGAACCTACTCCTTTGTACAAGTTTGAGTGGCACCCTGAATCCAGAGCTTTTATGCATGTAATGTGCAAGACTAGTGGGAAAATTGTGGCAAGTGTGGAAGTGCCTCTGTTTGTTACTTTCCATTTCATAAATGCGTACGAGGAGCAAGATGAAGATGGGAGGGTGACGGCCATTATTGCTGACTGTTGTGAGCACAATTCAGATACTACCATTCTTGATAGGCTTAGGTTGCAGAACCTTCGTTCGTTTAATGGTGAAGATGTTCTACCTGATGCTAGGGTTGGGCGGTTTAGAATACCACTGGATGGAAGTCCATATGGAACATTAGATGCAGCATTGGAGCCGAATGAACATGGGAGAGGCATGGACATGTGCAGCATAAACCCTAATTATTTAGGGAAGAAATACAGATATGCATATGCTTGCGGAGCACAAAGACCTTGTAACTTTCCCAACACCCTCACCAAGCTTGATTTTGAATTAAAGAAGGCTAAGAACTGGCATGAAGAAGGTGCAGTGCCCTCAGAACCCTTCTTTGTGGCACGACCAGGAGCAACAGAGGAAGATGATGGCGTAGTCATCTCCATTGTCAGTGAGAAAAATGGAGAAGGATTTGCGTTGGTGTTAGATGGTTCCACTTTTGAAGAGATTGCTAGGGCCAAATTCCCCTATGGACTTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAGAGTAA
Predicted protein sequences of Glyma.06g085800
>Glyma.06g085800.1.p sequence-type=predicted peptide transcript=Glyma.06g085800.1 locus=Glyma.06g085800 id=Glyma.06g085800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAFTFSPSIRNSISWPTMLVPDMPDINISLRNKGIYKGKRNINLRDLTKANVASPSLPLIAPPTPEERPGITHDCHHHHHVAWTSIPQERWEGELQVQGQIPLWLEGTYLRNGPGMWHIGDYNFRHLFDGYATLVRLGFRNGRLVAGHRQIESEAYRAAKKNKKICYREFSEVPKAANFLAYVGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPETLETVGKFEYSDSLGGLIHSAHPIVTDEEFLTLLPDLVRAGYLVVRMEPGTNERRVIGRVNCRGGPAPGWVHSFPVTQHYVVVPEMPLRYCAQNLLKAEPTPLYKFEWHPESRAFMHVMCKTSGKIVASVEVPLFVTFHFINAYEEQDEDGRVTAIIADCCEHNSDTTILDRLRLQNLRSFNGEDVLPDARVGRFRIPLDGSPYGTLDAALEPNEHGRGMDMCSINPNYLGKKYRYAYACGAQRPCNFPNTLTKLDFELKKAKNWHEEGAVPSEPFFVARPGATEEDDGVVISIVSEKNGEGFALVLDGSTFEEIARAKFPYGLPYGLHGCWVPKE*






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