SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g085100

Feature Type:gene_model
Chromosome:Gm06
Start:6501453
stop:6506779
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g085100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G63520.1AT ATCCD1,ATNCED1,CCD1,NCED1 JGI N/AIEA
1.13.11.51EC 9-cis-epoxycarotenoid dioxygenase JGI N/AIEA
KOG1285 KOG Beta, beta-carotene 15,15'-dioxygenase and related enzymes JGI N/AIEA
PTHR10543PantherFam BETA-CAROTENE DIOXYGENASE JGI N/AIEA
PTHR10543:SF30PantherFam OS09G0321200 PROTEIN JGI N/AIEA
PF03055Pfam Retinal pigment epithelial membrane protein JGI N/AIEA

Gene model name correspondences to Glyma.06g085100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g08952 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g085100
>Glyma.06g085100.4 sequence-type=CDS polypeptide=Glyma.06g085100.4.p locus=Glyma.06g085100 id=Glyma.06g085100.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACTTTATATAAAACATTCATAGTGAATTGCTCCATTCAGAAAAGACCCTCCCATGTCTCGGACAATTCTCGCCACTACAACCTTCCACTCTTCCCTGCCTTTAAGCCACTCAAGAAAGTTCTGCCTGAAGTCCCCTTGCAAATTGATGATGTTAAGAAAACCATGTCAAAAACTGCAGCTATATTACTTGATGCCTTTGTAGATTCGTTCTTTGAATTTATTGACCAACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGTGGAGTTAGGTGAAGCCATAGTTGTGACAAGCATCCAAGGACAAATTCCAGATGATTTTCCCGAGGGTGTCTACATTAGAAACGGTCCAAATCCACTTTTTGGAGGACTGCAATCAACAAATTCTATCTTTGGGAGGTCAAGTTACATATGGGTGGAAGGAGAGGGAATGCTTCACGCAATTTATTTTAAAAGGTGGAGTCCAGGGATTTGGACTGTCCTCTACAACAACAAGTACGTTGAAACCGATACATACAAGGTTGAAAAGCAACGAAGTAAACCATTGTTTCTACCGGCCATAGAAGGCGATTCACCAGCCATTTTGTCTGCTTATCTGCTAAATTGGTTGCGATTTGGCAAAGTAAACAAGTACATCAGCAACACCAATGTCTTTGAGCACTCAGGGAAGTTTTACTCCGTTGCTGAAAATCACATTCCACAAGAGATTGATATCTTTACACTGAAAACTTTAAGGAATTGGAATGTCAATGGTGCCTGGGATCGTCCTTTTACTAGTCATCCAAAGAAAGTTCCAGGTACAGGGGAACTAGTTACATTTGGGGTTGCAGCAACCAAACCTTTTGCCGTAGTTGGAATTATTTCTGCTGATGGCAAGAAATTGGTTCACAAAGTTGACCTCAAACTAAACAGGTGCACTCTTTGCCATGACATAGGTGTTACACAGAGGTACAATGTGATCATGGATTTCCCACTAACCATTGATCTAAACAGACTTCTTAGAGGAGGCCCATTAATGAAGTATAATAAGGAGGAATATGCAAGGATTGGAGTAATGCCACACTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTTCACATTATCAATTCTTTTGAGGATGGTCACGAGGTTGTAGTGAGGGGTTGCAGATCTCTTGATTCATTAATTCCTGGACCTGACCCGAGTTTGAAGGAATTTGAGTGGTTATCTCGTTGTCACGAGTGGCGATTGAATATGCAAACGGGAGAAGTTAAGGAGAGAGGTCTCTGTGGAGCCAACATAGTTTATATGGATTTTCCTATGATCAATGGAAACTTCATAGGTATTAGGAATAGATATGCATACACTCAAGTAGTTGATCCCATTGCAAGCTCTACTCAAGACGTGCCAAAATACGGAGGTTTAGCGAAGCTCTACTTTGAAGAATCATGTGCAAAGTTTTCCATGAGAAACAGAGAGCAACCTGAAGAGCCTATAAGAGTGGAATGCCACATGTTTGAGAAGAACACATTTTGCAGTGGGGCTGCCTTTGTCCCCAGAGATGGTGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACAAACATATCTGAAGTTCATATAATTGACACAAAGAAGTTTTCTGGTGAAACGGTTGCTAAAATTACAATGCCTCGTAGAGTACCATATGGATTTCACGGAGCTTTCATGCCAATTTCATTTGAGACACAGTAG

>Glyma.06g085100.5 sequence-type=CDS polypeptide=Glyma.06g085100.5.p locus=Glyma.06g085100 id=Glyma.06g085100.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACTTTATATAAAACATTCATAGTGAATTGCTCCATTCAGAAAAGACCCTCCCATGTCTCGGACAATTCTCGCCACTACAACCTTCCACTCTTCCCTGCCTTTAAGCCACTCAAGAAAGTTCTGCCTGAAGTCCCCTTGCAAATTGATGATGTTAAGAAAACCATGTCAAAAACTGCAGCTATATTACTTGATGCCTTTGTAGATTCGTTCTTTGAATTTATTGACCAACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGTGGAGTTAGGTGAAGCCATAGTTGTGACAAGCATCCAAGGACAAATTCCAGATGATTTTCCCGAGGGTGTCTACATTAGAAACGGTCCAAATCCACTTTTTGGAGGACTGCAATCAACAAATTCTATCTTTGGGAGGTCAAGTTACATATGGGTGGAAGGAGAGGGAATGCTTCACGCAATTTATTTTAAAAGGTGGAGTCCAGGGATTTGGACTGTCCTCTACAACAACAAGTACGTTGAAACCGATACATACAAGGTTGAAAAGCAACGAAGTAAACCATTGTTTCTACCGGCCATAGAAGGCGATTCACCAGCCATTTTGTCTGCTTATCTGCTAAATTGGTTGCGATTTGGCAAAGTAAACAAGTACATCAGCAACACCAATGTCTTTGAGCACTCAGGGAAGTTTTACTCCGTTGCTGAAAATCACATTCCACAAGAGATTGATATCTTTACACTGAAAACTTTAAGGAATTGGAATGTCAATGGTGCCTGGGATCGTCCTTTTACTAGTCATCCAAAGAAAGTTCCAGGTACAGGGGAACTAGTTACATTTGGGGTTGCAGCAACCAAACCTTTTGCCGTAGTTGGAATTATTTCTGCTGATGGCAAGAAATTGGTTCACAAAGTTGACCTCAAACTAAACAGGTGCACTCTTTGCCATGACATAGGTGTTACACAGAGGTACAATGTGATCATGGATTTCCCACTAACCATTGATCTAAACAGACTTCTTAGAGGAGGCCCATTAATGAAGTATAATAAGGAGGAATATGCAAGGATTGGAGTAATGCCACACTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTTCACATTATCAATTCTTTTGAGGATGGTCACGAGCAGGTTGTAGTGAGGGGTTGCAGATCTCTTGATTCATTAATTCCTGGACCTGACCCGAGTTTGAAGGAATTTGAGTGGTTATCTCGTTGTCACGAGTGGCGATTGAATATGCAAACGGGAGAAGTTAAGGAGAGAGGTCTCTGTGGAGCCAACATAGTTTATATGGATTTTCCTATGATCAATGGAAACTTCATAGGTATTAGGAATAGATATGCATACACTCAAGTAGTTGATCCCATTGCAAGCTCTACTCAAGACGTGCCAAAATACGGAGGTTTAGCGAAGCTCTACTTTGAAGAATCATGTGCAAAGTTTTCCATGAGAAACAGAGAGCAACCTGAAGAGCCTATAAGAGTGGAATGCCACATGTTTGAGAAGAACACATTTTGCAGTGGGGCTGCCTTTGTCCCCAGAGATGGTGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACAAACATATCTGAAGTTCATATAATTGACACAAAGAAGTTTTCTGGTGAAACGGTTGCTAAAATTACAATGCCTCGTAGAGTACCATATGGATTTCACGGAGCTTTCATGCCAATTTCATTTGAGACACAGTAG
Predicted protein sequences of Glyma.06g085100
>Glyma.06g085100.4.p sequence-type=predicted peptide transcript=Glyma.06g085100.4 locus=Glyma.06g085100 id=Glyma.06g085100.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATLYKTFIVNCSIQKRPSHVSDNSRHYNLPLFPAFKPLKKVLPEVPLQIDDVKKTMSKTAAILLDAFVDSFFEFIDQPLLPSQSNFAPVVELGEAIVVTSIQGQIPDDFPEGVYIRNGPNPLFGGLQSTNSIFGRSSYIWVEGEGMLHAIYFKRWSPGIWTVLYNNKYVETDTYKVEKQRSKPLFLPAIEGDSPAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTLRNWNVNGAWDRPFTSHPKKVPGTGELVTFGVAATKPFAVVGIISADGKKLVHKVDLKLNRCTLCHDIGVTQRYNVIMDFPLTIDLNRLLRGGPLMKYNKEEYARIGVMPHYGDANSIKWFEVEPNCTFHIINSFEDGHEVVVRGCRSLDSLIPGPDPSLKEFEWLSRCHEWRLNMQTGEVKERGLCGANIVYMDFPMINGNFIGIRNRYAYTQVVDPIASSTQDVPKYGGLAKLYFEESCAKFSMRNREQPEEPIRVECHMFEKNTFCSGAAFVPRDGGLEEDDGWIIAFVHNEDTNISEVHIIDTKKFSGETVAKITMPRRVPYGFHGAFMPISFETQ*

>Glyma.06g085100.5.p sequence-type=predicted peptide transcript=Glyma.06g085100.5 locus=Glyma.06g085100 id=Glyma.06g085100.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATLYKTFIVNCSIQKRPSHVSDNSRHYNLPLFPAFKPLKKVLPEVPLQIDDVKKTMSKTAAILLDAFVDSFFEFIDQPLLPSQSNFAPVVELGEAIVVTSIQGQIPDDFPEGVYIRNGPNPLFGGLQSTNSIFGRSSYIWVEGEGMLHAIYFKRWSPGIWTVLYNNKYVETDTYKVEKQRSKPLFLPAIEGDSPAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTLRNWNVNGAWDRPFTSHPKKVPGTGELVTFGVAATKPFAVVGIISADGKKLVHKVDLKLNRCTLCHDIGVTQRYNVIMDFPLTIDLNRLLRGGPLMKYNKEEYARIGVMPHYGDANSIKWFEVEPNCTFHIINSFEDGHEQVVVRGCRSLDSLIPGPDPSLKEFEWLSRCHEWRLNMQTGEVKERGLCGANIVYMDFPMINGNFIGIRNRYAYTQVVDPIASSTQDVPKYGGLAKLYFEESCAKFSMRNREQPEEPIRVECHMFEKNTFCSGAAFVPRDGGLEEDDGWIIAFVHNEDTNISEVHIIDTKKFSGETVAKITMPRRVPYGFHGAFMPISFETQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo