SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.06g084100

Feature Type:gene_model
Chromosome:Gm06
Start:6435516
stop:6441328
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G32770.1AT ATSDX1,VTE1 JGI N/AIEA
5.5.1.24EC tocopherol cyclase JGI N/AIEA
GO:0009976GO-mf tocopherol cyclase activity JGI N/AIEA
K09834KEGG Ubiquinone and other terpenoid-quinone biosynthesis JGI N/AIEA
PTHR35309PantherFam FAMILY NOT NAMED JGI N/AIEA
PTHR35309:SF2PantherFam TOCOPHEROL CYCLASE, CHLOROPLASTIC JGI N/AIEA
PF14249Pfam Tocopherol cyclase JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma06g08850 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.06g084100.1 sequence-type=CDS polypeptide=Glyma.06g084100.1.p locus=Glyma.06g084100 id=Glyma.06g084100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGCCAAGCTCTGGGAGTCTCCTCTTTTGTCTCCCTCACTCCCTCTTCTTCCTTCTCTCAATCTCCACTTTCCCTCTTCAACGCGCCTCCTAGCTCGCAGTTTCTTCTCAGACACCGTTCCCATTGATAACAAGGAAAAGGAACAACTTGTAACTTCTGTCAAACCTACTTACTCCCCTACTCCTCCCAATCGTCACCTTCGAACTCCTCACAGCGGCTACCATTTCGATGGGACTACTCGCAAATTCTTCGAGGGTTGGTACTTCAAACTTTCCATTCCGGAACGGAGGCAGAGTTTTTGCTTCATGTACTCCGTCGAGAGCCCATCCTTTCGTAAACCACTGACGCCGCTCGAAGTGGCCCAATACGGCTCCAGGTTTACTGGTGTCGGTGCTCAAATTCTCGGTGCCGATGACAAATATATTTGTCAATTTTCTCCTGAATCACAATTCTTCTGGGGAAGTAGGCATGAACTAATGTTGGGGAACACTTTCGTGCCCAACCAAAATTCTAAACCTCCAAACAAGGAGGTTCCTCCTCAGGAATTTAATGATAGAGTGCTGGAAGGTTTTCAAGTCAGTCCCCTTTGGCATCAAGGTTTTATTCGCGATGATGGAAGGTCAAATTATGTAGAGACAGTAAAGACAGCTCGTTGGGAGTATAGTACGCGTCCTGTATATGGTTGGGGTGATGTTGGTTCCACGCAGAAGTCTACTGCTGGGTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGGTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTTATTCAGAAAAGAACTGGGGTGGAGGATTCCCAAGAAAATGGTTTTGGGTTCAATGTAATGTTTTTGAAGGGGCTAGTGGAGAAATTGCTCTTACAGCAGCTGGTGGATTGAGGCAAATTCCTGGAATTGCCGAGACCTTTGAAAATGCTGCATTGATTGGAATTCATTATGGTGGAATTTTTTATGAATTTGTGCCATGGAATGGTGTTGTTAACTGGGAAGTTACTACTTGGGGTTATTGGTTTATGTCAGCAGACAATGGCAGATATGTGGTTGAAATAGAAGCAACAACAGAGGATCCAGGTACAACATTGCGTGCTCCAACAGCAGAAGCCGGCTTGGCCCCTGCTTGTAAAGATACATGCTTCGGAGATCTAAAATTACAAATGTGGGAACGAAGATATGACGGCAGCAAGGGGAAGATCATATTGGACGTTTCAAGTAATATGGCAGCACTAGAAGTTGGAGGAGGTCCATGGTTTAACACTTGGAAGGGCAAGACATCAACTCCAGCAGCCCTTAGCCGTGTCCTTGAATTACCCATAGACGTAGAGGGCATTTTCAATCCTGTTCCTCTATTTAAACCGCCTGGCCTGTAG

>Glyma.06g084100.2 sequence-type=CDS polypeptide=Glyma.06g084100.2.p locus=Glyma.06g084100 id=Glyma.06g084100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGGGGAACACTTTCGTGCCCAACCAAAATTCTAAACCTCCAAACAAGGAGGTTCCTCCTCAGGAATTTAATGATAGAGTGCTGGAAGGTTTTCAAGTCAGTCCCCTTTGGCATCAAGGTTTTATTCGCGATGATGGAAGGTCAAATTATGTAGAGACAGTAAAGACAGCTCGTTGGGAGTATAGTACGCGTCCTGTATATGGTTGGGGTGATGTTGGTTCCACGCAGAAGTCTACTGCTGGGTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGGTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTTATTCAGAAAAGAACTGGGGTGGAGGATTCCCAAGAAAATGGTTTTGGGTTCAATGTAATGTTTTTGAAGGGGCTAGTGGAGAAATTGCTCTTACAGCAGCTGGTGGATTGAGGCAAATTCCTGGAATTGCCGAGACCTTTGAAAATGCTGCATTGATTGGAATTCATTATGGTGGAATTTTTTATGAATTTGTGCCATGGAATGGTGTTGTTAACTGGGAAGTTACTACTTGGGGTTATTGGTTTATGTCAGCAGACAATGGCAGATATGTGGTTGAAATAGAAGCAACAACAGAGGATCCAGGTACAACATTGCGTGCTCCAACAGCAGAAGCCGGCTTGGCCCCTGCTTGTAAAGATACATGCTTCGGAGATCTAAAATTACAAATGTGGGAACGAAGATATGACGGCAGCAAGGGGAAGATCATATTGGACGTTTCAAGTAATATGGCAGCACTAGAAGTTGGAGGAGGTCCATGGTTTAACACTTGGAAGGGCAAGACATCAACTCCAGCAGCCCTTAGCCGTGTCCTTGAATTACCCATAGACGTAGAGGGCATTTTCAATCCTGTTCCTCTATTTAAACCGCCTGGCCTGTAG

>Glyma.06g084100.1.p sequence-type=predicted peptide transcript=Glyma.06g084100.1 locus=Glyma.06g084100 id=Glyma.06g084100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEAKLWESPLLSPSLPLLPSLNLHFPSSTRLLARSFFSDTVPIDNKEKEQLVTSVKPTYSPTPPNRHLRTPHSGYHFDGTTRKFFEGWYFKLSIPERRQSFCFMYSVESPSFRKPLTPLEVAQYGSRFTGVGAQILGADDKYICQFSPESQFFWGSRHELMLGNTFVPNQNSKPPNKEVPPQEFNDRVLEGFQVSPLWHQGFIRDDGRSNYVETVKTARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGKRIEFDNAPSYSEKNWGGGFPRKWFWVQCNVFEGASGEIALTAAGGLRQIPGIAETFENAALIGIHYGGIFYEFVPWNGVVNWEVTTWGYWFMSADNGRYVVEIEATTEDPGTTLRAPTAEAGLAPACKDTCFGDLKLQMWERRYDGSKGKIILDVSSNMAALEVGGGPWFNTWKGKTSTPAALSRVLELPIDVEGIFNPVPLFKPPGL*

>Glyma.06g084100.2.p sequence-type=predicted peptide transcript=Glyma.06g084100.2 locus=Glyma.06g084100 id=Glyma.06g084100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLGNTFVPNQNSKPPNKEVPPQEFNDRVLEGFQVSPLWHQGFIRDDGRSNYVETVKTARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGKRIEFDNAPSYSEKNWGGGFPRKWFWVQCNVFEGASGEIALTAAGGLRQIPGIAETFENAALIGIHYGGIFYEFVPWNGVVNWEVTTWGYWFMSADNGRYVVEIEATTEDPGTTLRAPTAEAGLAPACKDTCFGDLKLQMWERRYDGSKGKIILDVSSNMAALEVGGGPWFNTWKGKTSTPAALSRVLELPIDVEGIFNPVPLFKPPGL*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo