SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g082200

Feature Type:gene_model
Chromosome:Gm06
Start:6293118
stop:6296713
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g082200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G32720.2AT AtLa1,La1 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K11090KEGG Systemic lupus erythematosus JGI N/AIEA
PTHR22792PantherFam LUPUS LA PROTEIN-RELATED JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF05383Pfam La domain JGI N/AIEA
PF08777Pfam RNA binding motif JGI N/AIEA

Gene model name correspondences to Glyma.06g082200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g08650 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g082200
>Glyma.06g082200.1 sequence-type=CDS polypeptide=Glyma.06g082200.1.p locus=Glyma.06g082200 id=Glyma.06g082200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAACGCAATCGTTAGACGAAGAAACAACTAAGAAAGTCATACGACAGGTTGAGTTTTATTTCGGCGATAGCAACCTTCTCACCGATGGTTTCATGAGGAATAGTATCACTGAAAGCGAAGATGGCATGATTAGTTTGGCGCTGATTTGCTCGTTTAATCGAATGCGAAAGCACCTTAATTTGGGTGATGTAAAGCCCGAAGAAGTGGCCCAAGATACCGTGAATGCTGTTGCTCAAACTTTGAGAAATTCAGCTACACTCAAGGTCTCCGAAGATGGGAAAAAAGTTGGCAGGAAAACTGAACTTCCAAAGCTAGAAGAGGTTGAGCAGGTGGAGATAAGAACACTTGCTGTATCGCCATTTGAACATGATCTGAAGCTTGAAGATGTGGAGAAACTCTTTGGTCAATATGCCAAGGTTAATAGTGTCCGGCTTCCCCATCATGTTGGAGACAAAAAGTTCTTCTGTGGCACTGCTCTTGTAGAATTTTCTTCAGAGGAAGATGTAGAAAAGGTCATGAAGGAAAAATTGGTATATGCTGGGGCTGAGTTAGAATTAAAACCAAAGAAGGACTTTGATGCAGATAGAGAAAAAGAACTAGAAGATTATAAAAAATCTCGTCCACCTGTGGGTTCAAATCAGCAGAATAACACAAATGTAGAAGAAGACTACCCTAAAGGCTTAATTATTGCCTTCAAACTAAAGAGCATTTCAGATGAAATTCCTTCAGAACAAAATGGTGTTGACCAACAAGCCAAGGACAATAGTGTTGTCTCCAAAACAGATGAAAACCCCCACTCTGAAATTACTTCAGGAGAAAATGACCAAATGGTAACAGAAAATGTTGGCGATGATGAAGAAAACTCTGAGACGAAAGAAGCAAAGGAAACTGAAAGTGAAGAAAACAATGGGATGAAAGAAGGAAAGGTAACCGAAGGTGAAGACAAGAAACGACAAGCTGGTGGAAAATTTTCTGCCGCTGCTTACAAGGACAACATGGATGTTGTCTCACGTGAGGATTTGAAGAGTGTCTTTGAGAAATTTGGTACAGTGAAGTACATTGATTTCAAGATTGGAGCAGAGTCAGGATACATTCGCTTTGAAGAAACTGAAGCTGCTCAGAAAGCACGTGCTGCTGCAGTTATTTCAGAAAAGGATGGCTTGGTTGTAAAGAATTATATTGCTATTCTAGATCCAGTGACTGGTGAGGCCGAAAAAGAATACTGGAACCTGCTTCGTGGTAATCAAGGCAAGCACCGTGAATTTAAGAATAAGCAGGGAAGGGGAGGATGGCATGGTAGAGGGGGCAAACATGCACGCTCTAGAGATAACGGGTCTAGAGATCGCCGAAATAAGGCTCAGAAAGTTGATGCTGCATAA
Predicted protein sequences of Glyma.06g082200
>Glyma.06g082200.1.p sequence-type=predicted peptide transcript=Glyma.06g082200.1 locus=Glyma.06g082200 id=Glyma.06g082200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATQSLDEETTKKVIRQVEFYFGDSNLLTDGFMRNSITESEDGMISLALICSFNRMRKHLNLGDVKPEEVAQDTVNAVAQTLRNSATLKVSEDGKKVGRKTELPKLEEVEQVEIRTLAVSPFEHDLKLEDVEKLFGQYAKVNSVRLPHHVGDKKFFCGTALVEFSSEEDVEKVMKEKLVYAGAELELKPKKDFDADREKELEDYKKSRPPVGSNQQNNTNVEEDYPKGLIIAFKLKSISDEIPSEQNGVDQQAKDNSVVSKTDENPHSEITSGENDQMVTENVGDDEENSETKEAKETESEENNGMKEGKVTEGEDKKRQAGGKFSAAAYKDNMDVVSREDLKSVFEKFGTVKYIDFKIGAESGYIRFEETEAAQKARAAAVISEKDGLVVKNYIAILDPVTGEAEKEYWNLLRGNQGKHREFKNKQGRGGWHGRGGKHARSRDNGSRDRRNKAQKVDAA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo