Report for Sequence Feature Glyma.06g080900
Feature Type: gene_model
Chromosome: Gm06
Start: 6196562
stop: 6200327
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.06g080900
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G25590.1 AT
Protein of unknown function (DUF630 and DUF632)
JGI N/A IEA
PTHR21450 Panther
UNCHARACTERIZED
JGI N/A IEA
PF04782 PFAM
Protein of unknown function (DUF632)
JGI N/A IEA
PF04783 PFAM
Protein of unknown function (DUF630)
JGI N/A IEA
Expression Patterns of Glyma.06g080900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.06g080900
Paralog Evidence Comments
Glyma.04g079400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.06g080900 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma06g08520 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.06g080900
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.06g080900.1 sequence-type=CDS polypeptide=Glyma.06g080900.1.p locus=Glyma.06g080900 ID=Glyma.06g080900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTTGTGCACAGTCCCGAATAGACAACGAGGAATCCGTGTCTCGCTGCAAGGACCGTAAAAATCTCATCAAAGACGCCGTCGTCGCTCGCAACGCCTTCGCCGCCGGCCATTCAGGCTACGCCGTTGCGCTCAAGAACACCGGCGCCGCCCTCAGCGACTACGCCCACGGCGAGACCCACGACCCCCACCCTCCGCCCCTCGACCCTCCCTCCTCCTCCGCCGACCCTCCGCCGCCGCCGCCGCCACCAATCGACGACAGTCTCCCTCCCCCGCCGCCGCCTCTCCCGGAGTTCTCCCCCGCCCCGGCGCCGCTTTCTCGCTCCGTCACCATGCCCGCCGGCGTCATGCACCACTACCGCCACCGCAGCCCCGTCCCCCTCTCCATCGCCGAGGAGGACGAAGAGCAAGATGCAACCCCCAAGCTGGCGAGGAAAACCGCCGGATCGCCGCCTCCGGAGATGAAGACTCCGCCGCCGCCGCCTCCGGAGTCGAAGGGCATGGCTTGGGATTACTTCTTCATGGTGGAGAACATGCCTGGACGTTCTCTCAGTGCTGAAGATGATAATGATGATGATGATGATGATGATAATCATATTCATAACCATAATCATAATGATGATGGTGAGCGTAAAATGGAGAATGTGGTTGAAGATGAGGTTGAGCCTAAGACACCAGATAAAGTGCAGGAACATGAGAATGTGAGTATTCATGAGGAGCATGATGATGGGATAAGTGAAGCGAAGAAATACATTGAGCATTCTAAAACTGCTCCTGCTGAGTTTAGAAGAGCTATAAAGGTGGTTCCTTCTGTTACTCTTATGCAGATTCTCAATGTCCTTGATGATCACTTCTTGAAGGCCTCCGAGGGCGCTCAGGAAGTTACCAAGATGCTCGAGGCTACTAGGTTGCATTATCATTCCAATTTCGCCGATAATCGCGGGCACATTGATCATTCTGCTAGGGTTATGCGTGTCATAACATGGAATAGGTCCTTCAGAGGTGTGTCCAATGGGGATGCCGCTAAAGATGACATTGATTCTGAGGAATATGAAACTCATGCCACTGTGTTGGATAAGTTGTTGGCATGGGAGAAGAAACTTTATGAAGAAGTCAAGCAAGGTGAGCTTATGAAGTTTGAATATCAGAGAAAAGTTGCAATTCTAAACAAGCAGAAGAAGCGTGGTGCCAGTGCTGAATCCTTAGAAAAGACTAAAGCAGCTGTTAGCCATTTGCATACAAGATATATTGTTGACATGCAGTCGATGGATTCAACAGTTTCAGAAGTGAACCATATTCGAGATGCCCAGTTGTATCCGAAACTTGTTGCTCTTGTTATTGAGATGGCAAATATGTGGGAAAATATGTGCTTACATCATGACAGCCAGCTGAAAATAGTTACAGACCTCAAATCTCTTGATATTTCTCAAGCTCCTAAGGAAACAACCAAGCATCATTATGATCGCACTGTGCAACTTGAGAAAGTCATCCTGGAATGGCATTTACAATTTGAGAAGCTTGTGACTCAACAGAAACATTACATCAAAGCTCTTAACAGCTGGCTAAAGTTAAATCTCATTCCTATTGAAAGCAACCTAAAAGAGAAAATCTCATCCCCTCCAAAAGCTCAGAATCCTCCAATCCAAGCCCTTCTCCATGCATGGCATGATTATGTTGACAAGCTTCCTGATGAGCTTGCCAAATCTGCTATTTCCTCCTTTGCTGCTGTGATAAAGACGATCTTACTTCAGCAGGAGGAAGAGATGAAGTTAAAGGAGCGATGTGAGGAAACCAGAAAGGAATACTTGAAGAAAAAACAAGCATTTGAGGAATGGTACCAGAAGCATTTAATGCGGAGAGGGCCTGATGAAGCAGAACATGAAAGAGGAGAGGAAGTAAACACAAATAATCCTGTCTCGGAGAGGCAGTTTGTTGTTGAGAGCTTGCAGAAGAGATTAGAAGAGGAAATTGAATCCCACCAAAAACATTGCATTCAGGTGCGAGAGAAATCACTGCAGAGTCTCAAAACTCGCTTGCCTGAACTCTTCCGTGCATTGTCAGACTATGCTCATGCCTGTGCTGAGGCTTATGAGAAGCTGAAGTTAATCACACAGTCACGAGGTGGTGGGGCATAA
Predicted protein sequences of Glyma.06g080900
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.06g080900.1.p sequence-type=predicted peptide transcript=Glyma.06g080900.1 locus=Glyma.06g080900 ID=Glyma.06g080900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGCAQSRIDNEESVSRCKDRKNLIKDAVVARNAFAAGHSGYAVALKNTGAALSDYAHGETHDPHPPPLDPPSSSADPPPPPPPPIDDSLPPPPPPLPEFSPAPAPLSRSVTMPAGVMHHYRHRSPVPLSIAEEDEEQDATPKLARKTAGSPPPEMKTPPPPPPESKGMAWDYFFMVENMPGRSLSAEDDNDDDDDDDNHIHNHNHNDDGERKMENVVEDEVEPKTPDKVQEHENVSIHEEHDDGISEAKKYIEHSKTAPAEFRRAIKVVPSVTLMQILNVLDDHFLKASEGAQEVTKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGDAAKDDIDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVIEMANMWENMCLHHDSQLKIVTDLKSLDISQAPKETTKHHYDRTVQLEKVILEWHLQFEKLVTQQKHYIKALNSWLKLNLIPIESNLKEKISSPPKAQNPPIQALLHAWHDYVDKLPDELAKSAISSFAAVIKTILLQQEEEMKLKERCEETRKEYLKKKQAFEEWYQKHLMRRGPDEAEHERGEEVNTNNPVSERQFVVESLQKRLEEEIESHQKHCIQVREKSLQSLKTRLPELFRALSDYAHACAEAYEKLKLITQSRGGGA*