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Report for Sequence Feature Glyma.06g077800

Feature Type:gene_model
Chromosome:Gm06
Start:6023842
stop:6027245
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.06g077800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G31600.1AT UDP-N-acetylglucosamine (UAA) transporter family JGI N/AIEA
GO:0034219GO-bp carbohydrate transmembrane transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0090481GO-bp pyrimidine nucleotide-sugar transmembrane transport EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0015165GO-mf pyrimidine nucleotide-sugar transmembrane transporter activity EnsemblGenomesN/AIEA
KOG1444 KOG Nucleotide-sugar transporter VRG4/SQV-7 JGI N/AIEA
PTHR11132Panther SOLUTE CARRIER FAMILY 35 JGI N/AIEA
PF08449PFAM UAA transporter family JGI N/AIEA

Expression Patterns of Glyma.06g077800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.06g077800
ParalogEvidenceComments
Glyma.04g076600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.06g077800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g08190 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.06g077800
>Glyma.06g077800.2 sequence-type=transcript locus=Glyma.06g077800 ID=Glyma.06g077800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GATCTGATTTTGAAAGCTTGACTTTGGGTTTAGGTTTTGTTTTACTATTTGATCGGATCGGATCGGATCTTGCTTTCGCCATTAATTACTCATGGAGATCCGTGCCGATGCAGATACCAGCTCCTTTTCAAGTTTGTTCGCAGCTGTGTCATATGGATTTACATCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTCCTCACTCTGCAGCAATTGGTTACCACCTTGCTTATTCACTTTGGTAGAAAGACGGGATACACGAAAGCAAGAGAACTGGATATGACAACGGCCAAGCGACTGCTCCCGCTCTCTATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCAAGTTTGAAAGGAGTCAATATCCCTATGTATATTGCAATCAAGAGGCTTACGCCACTTGCTGTACTCGTTGCTGGGTGTTTCTCTGGAAAAGGAAAACCTACAACTCAGGTGGCTCTTTCAGTGATATTGACTGCTGCTGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCCTTTGTTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGGATGGGCTTTCATCCTTGGAAATCATGTTCTATAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTCATCGTAGCCACTGGGGAATTCCCAAATTCTTTATCCGTATTATTTGCAAAGAGTTATTCTTTCTCATTTTTGGTGATCCTGATTCTTTCATTGGTGATGGGCATCATTCTCAACTTCACCATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGACCTTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGAGTGGATTGGTTATCAATACAGCTGGTGGTGTGTGGTATTCATATGCTAAATATCACCAGAGAAAAAGTAAGGCGGTGAAGCTAGTACCAGATGTGGAGGCTCATCGTAAATAGAAGTGGCATCGATAAGTTGTGGTGAAAACTAACGGTTTCATGAATGTTTCTTTACTTTGATTTACTACGATTGTAAACACTGGTAGTTTAGTTTTTTTGGTTTTCTTTTCCTTATAATTTTATAGTAATTGCAGGCTCACATAGTCTGAGTCTAAGATGTAGTAATACTGACATGATATTCGGAATTGAGTAAAATAATTGAACTCTTGTGATTCCAATGCGTACCAGAATATTGTAGGGTGTCTTTTTTATTTTATGCACTGTTCT

>Glyma.06g077800.3 sequence-type=transcript locus=Glyma.06g077800 ID=Glyma.06g077800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
CGAAGTGAGTGACGCGAGTCTCCATCGTGCTCGGATTTTAGGGAACTTCCAACTTGGGGAGTGAGATGCCGATACCAAGCCAGCTGTTTCACTCTTTTCTCTCTTTCCCTTTCTATTATCTCTCCAACTTCACTCCTTTTATTCCCTTATCACTTCTTAGTTCTTTCCTTATCCTTTCGCTATCCAGACATGTAATCTCTCCTTTACCAAGTTTTGTTTTACTATTTGATCGGATCGGATCGGATCTTGCTTTCGCCATTAATTACTCATGGAGATCCGTGCCGATGCAGATACCAGCTCCTTTTCAAGTTTGTTCGCAGCTGTGTCATATGGATTTACATCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTCCTCACTCTGCAGCAATTGGTTACCACCTTGCTTATTCACTTTGGTAGAAAGACGGGATACACGAAAGCAAGAGAACTGGATATGACAACGGCCAAGCGACTGCTCCCGCTCTCTATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCAAGTTTGAAAGGAGTCAATATCCCTATGTATATTGCAATCAAGAGGCTTACGCCACTTGCTGTACTCGTTGCTGGGTGTTTCTCTGGAAAAGGAAAACCTACAACTCAGGTGGCTCTTTCAGTGATATTGACTGCTGCTGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCCTTTGTTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGGATGGGCTTTCATCCTTGGAAATCATGTTCTATAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTCATCGTAGCCACTGGGGAATTCCCAAATTCTTTATCCGTATTATTTGCAAAGGAACTGCTAAAAGCCTCAGTGATAGTGTAGTTAATCCCAAACAGCAAATATGTTAGTTATGTACTCATTCATTTCCTTATGATTGTTATTCTCTTCTTCTAACTGATATTGTCTGCTAAGTAGTTTTGTGCAAATTTTCTATGTATTGGTCCATTGTAAAATATTAATCAGAATCTAGCAGATTCATTTCTTGCAAAACAATCATGACCTGGGGGATTTGTAGATAACTTTGAGATTGTTAGGATTGGGCATGTAACAAAAAATCAAGGAAAAAGAGCGTGGGGGTTGTACTTGTGAGGCTGAGATCACTTGATGTGTGGTAGAAAAGAAGACAAGGCAGCAGCTTTTGATTTTGGCATGATCTGGGTCTGTTTCACATTCATAAAACACTTGTCCTTTCATAATATACCAGATGCAATTATAAATTAAATTAATAGATTACTTGATTCAGTTTCTTTAATTCTCCTAAATTAAAGTGCTGGCAAAGTGTATTTCTTAGCGATCATTTTGTGAGAATAATTCAAGGATCATAAAACTTCCTTGTGATGGTTGACAACTG
Coding sequences of Glyma.06g077800
>Glyma.06g077800.1 sequence-type=CDS polypeptide=Glyma.06g077800.1.p locus=Glyma.06g077800 ID=Glyma.06g077800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATCCGTGCCGATGCAGATACCAGCTCCTTTTCAAGTTTGTTCGCAGCTGTGTCATATGGATTTACATCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTCCTCACTCTGCAGCAATTGGTTACCACCTTGCTTATTCACTTTGGTAGAAAGACGGGATACACGAAAGCAAGAGAACTGGATATGACAACGGCCAAGCGACTGCTCCCGCTCTCTATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCAAGTTTGAAAGGAGTCAATATCCCTATGTATATTGCAATCAAGAGGCTTACGCCACTTGCTGTACTCGTTGCTGGGTGTTTCTCTGGAAAAGGAAAACCTACAACTCAGGTGGCTCTTTCAGTGATATTGACTGCTGCTGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCCTTTGTTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGGATGGGCTTTCATCCTTGGAAATCATGTTCTATAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTCATCGTAGCCACTGGGGAATTCCCAAATTCTTTATCCGTATTATTTGCAAAGAGTTATTCTTTCTCATTTTTGGTGATCCTGATTCTTTCATTGGTGATGGGCATCATTCTCAACTTCACCATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGACCTTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGAGTGGATTGGTTATCAATACAGCTGGTGGTGTGTGGTATTCATATGCTAAATATCACCAGAGAAAAAGTAAGGCGGTGAAGCTAGTACCAGATGTGGAGGCTCATCGTAAATAG

>Glyma.06g077800.2 sequence-type=CDS polypeptide=Glyma.06g077800.2.p locus=Glyma.06g077800 ID=Glyma.06g077800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATCCGTGCCGATGCAGATACCAGCTCCTTTTCAAGTTTGTTCGCAGCTGTGTCATATGGATTTACATCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTCCTCACTCTGCAGCAATTGGTTACCACCTTGCTTATTCACTTTGGTAGAAAGACGGGATACACGAAAGCAAGAGAACTGGATATGACAACGGCCAAGCGACTGCTCCCGCTCTCTATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCAAGTTTGAAAGGAGTCAATATCCCTATGTATATTGCAATCAAGAGGCTTACGCCACTTGCTGTACTCGTTGCTGGGTGTTTCTCTGGAAAAGGAAAACCTACAACTCAGGTGGCTCTTTCAGTGATATTGACTGCTGCTGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCCTTTGTTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGGATGGGCTTTCATCCTTGGAAATCATGTTCTATAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTCATCGTAGCCACTGGGGAATTCCCAAATTCTTTATCCGTATTATTTGCAAAGAGTTATTCTTTCTCATTTTTGGTGATCCTGATTCTTTCATTGGTGATGGGCATCATTCTCAACTTCACCATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGACCTTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGAGTGGATTGGTTATCAATACAGCTGGTGGTGTGTGGTATTCATATGCTAAATATCACCAGAGAAAAAGTAAGGCGGTGAAGCTAGTACCAGATGTGGAGGCTCATCGTAAATAG

>Glyma.06g077800.3 sequence-type=CDS polypeptide=Glyma.06g077800.3.p locus=Glyma.06g077800 ID=Glyma.06g077800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGATCCGTGCCGATGCAGATACCAGCTCCTTTTCAAGTTTGTTCGCAGCTGTGTCATATGGATTTACATCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTCCTCACTCTGCAGCAATTGGTTACCACCTTGCTTATTCACTTTGGTAGAAAGACGGGATACACGAAAGCAAGAGAACTGGATATGACAACGGCCAAGCGACTGCTCCCGCTCTCTATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCAAGTTTGAAAGGAGTCAATATCCCTATGTATATTGCAATCAAGAGGCTTACGCCACTTGCTGTACTCGTTGCTGGGTGTTTCTCTGGAAAAGGAAAACCTACAACTCAGGTGGCTCTTTCAGTGATATTGACTGCTGCTGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTTTTGGGTATAGCATGGCCTTTGTTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAAATCTGGTGCTGAGGATGGGCTTTCATCCTTGGAAATCATGTTCTATAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTCATCGTAGCCACTGGGGAATTCCCAAATTCTTTATCCGTATTATTTGCAAAGGAACTGCTAAAAGCCTCAGTGATAGTGTAG
Predicted protein sequences of Glyma.06g077800
>Glyma.06g077800.1.p sequence-type=predicted peptide transcript=Glyma.06g077800.1 locus=Glyma.06g077800 ID=Glyma.06g077800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEIRADADTSSFSSLFAAVSYGFTSMAMVFINKAVLMQYAYSMTLLTLQQLVTTLLIHFGRKTGYTKARELDMTTAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGCFSGKGKPTTQVALSVILTAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSLEIMFYNSFLSLPFLMFLIVATGEFPNSLSVLFAKSYSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVVSTTFGFFLLGGVQVHALNVSGLVINTAGGVWYSYAKYHQRKSKAVKLVPDVEAHRK*

>Glyma.06g077800.2.p sequence-type=predicted peptide transcript=Glyma.06g077800.2 locus=Glyma.06g077800 ID=Glyma.06g077800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEIRADADTSSFSSLFAAVSYGFTSMAMVFINKAVLMQYAYSMTLLTLQQLVTTLLIHFGRKTGYTKARELDMTTAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGCFSGKGKPTTQVALSVILTAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSLEIMFYNSFLSLPFLMFLIVATGEFPNSLSVLFAKSYSFSFLVILILSLVMGIILNFTMFLCTIVNSALTTTIVGVLKGVVSTTFGFFLLGGVQVHALNVSGLVINTAGGVWYSYAKYHQRKSKAVKLVPDVEAHRK*

>Glyma.06g077800.3.p sequence-type=predicted peptide transcript=Glyma.06g077800.3 locus=Glyma.06g077800 ID=Glyma.06g077800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEIRADADTSSFSSLFAAVSYGFTSMAMVFINKAVLMQYAYSMTLLTLQQLVTTLLIHFGRKTGYTKARELDMTTAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGCFSGKGKPTTQVALSVILTAAGVLIAALGDFSFDLFGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSLEIMFYNSFLSLPFLMFLIVATGEFPNSLSVLFAKELLKASVIV*






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