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Report for Sequence Feature Glyma.06g071300

Feature Type:gene_model
Chromosome:Gm06
Start:5428163
stop:5435130
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11380.1AT DXPS3 JGI N/AIEA
2.2.1.7EC 1-deoxy-D-xylulose-5-phosphate synthase JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0016114GO-bp terpenoid biosynthetic process JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0008661GO-mf 1-deoxy-D-xylulose-5-phosphate synthase activity JGI N/AIEA
K01662KEGG Terpenoid backbone biosynthesis JGI N/AIEA
PTHR11624PantherFam DEHYDROGENASE RELATED JGI N/AIEA
PF02779Pfam Transketolase, pyrimidine binding domain JGI N/AIEA
PF02780Pfam Transketolase, C-terminal domain JGI N/AIEA
PF13292Pfam 1-deoxy-D-xylulose-5-phosphate synthase JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma06g07491 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.06g071300.1 sequence-type=CDS polypeptide=Glyma.06g071300.1.p locus=Glyma.06g071300 id=Glyma.06g071300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCTACTACTCCTTCATCTACATACCCATTCGGAACCCCTTTCCACTCGCACACTCGAAGACTTGATTGCTCAACCTCAACCTCCATGTTCCCCCTTCATTCAGACCTATCTACAATTTCTATGTGCCCGCGTTCTGCTTCAAAGGGATTAGTTGATCGAGTATATGCACAGCTTGATGGTGATGATTACCACAGGGAGAAAGTTCCAACACCCATTCTTGACATGGTTGAAAACCCTCTTTGCTTGAAGAACTTATCTCTTAAGGAACTGAAACAACTAGCAGTTGAAATCCGTTCAGATTTGTCTTCTATTATGTCAGGTACACAAATATCACCGAAAGCAAGTATGGCAGTGGTGGAGCTGACAGTTGCAATACATCATGTTTTCAATGCTCCAGTAGACAAGATATTGTGGGATGTTGGGGATCAAACATATGCACATAAAATTCTTACAGGAAGGCGATCACTCATGACGACAATGAGAAGAAAGAATGGTCTTTCTGGTTTTACTTCCCGATTTGAAAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCTGCTGGACTTGGCATGGCAGTTGCACGGGATATTAAGGGGAGGCAAGAACGCGTAGTTGCAGTTATCAGCAATTGGACAACTATGGCTGGTCAGGCGTATGAGGCAATGAGCAATGCAGGATATTTGGACTCAAATATGGTTGTGATTTTGAATGATAGCCGCCACTCTTTACTTCCAAAAATTGAGGAGGGGCCAAAGACATCTGTCAATGCCCTATCTAGTACCCTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGGCGATTTAGAGAAGCTGCTAAGGGTGTCACGAAACGAATTGGTAGAGGTATGCATGAGTTGGCAGCTAAAGTTGATGAGTATGCTCGTGGTATGATGGGTCCTCTAGGTTCTACTCTTTTTGAAGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGACACAATATTGAAGATCTCATATGTGTTCTGCAAGAAGTAGCTTCCCTGGATTCAATGGGACCTGTCTTGGTACATGTGATAACTGATGAAAATCAGGGAGATGATAACAGTCAGAAAAGTGATATGTCAGATGAGCAGAAAAATGAAGGTTTTGTTAAATCTGATTTGTTAGATAATCCTGTTTGGCCTCAAACATATGGCAATTGCTTTGTGGCGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTATTGTTGTTCATGCTGGATTAACGATGGAGCCATCACTTGAACTGTTTCAGGAAAAATTTCCGGATAGGTTTTTTGATGTGGGAATGGCTGAGCAACATGCAGTCACATTTGCTTCTGGTTTGGCATGTGGTGGCTTGAAGCCATTTTGTGTCATACCTTCGTCCTTTCTACAAAGAGCCTATGACCAGGTGGTACATGATGTTGATCAACAGAGAATTCCAGTGCGTTTTGTTATTACAAGTGCAGGATTGGTAGGTTCTGATGGTCCCCTTCGATGTGGAGCATTTGATATAAACTTTATGTCATGCTTACCAAACATGATTGTCATGGCCCCATCTGATGAGCTTGAACTCATGCACATGGTGGCTACTGCTACTCGTATCAATAATCAGCCTATCTGCTTTCGGTATCCAAGGGGTGCCCTGGTTGGGGAAGGCTACACTATAGGTGATGGAATCCCCATCAAGATAGGAAGAGGAAGAGTTCTTGTTGAAGGTAAAGATGTTGCTTTCCTAGGATATGGATCGATGGTTCAGAACTGCTTAAAGGCTCATTCACTCCTTGCAAAGCTTGGCATTGAGGTCACGGTTGCTGATGCAAGGTTCTGCAAGCCCCTTGACATTATGCTTCTGAGGCAGCTTTGTAAACACCACTCTTTTCTAGTTACTGTTGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGCTCAGTTTATTGCAGTTAATGGACTGCTCGATGGAAGAATTAAGTGGCGACCAATTGTTTTACCAGACAGATATATTGAGCATGCATCACCAAATGAACAGCTTGACCAAGCAGGGTTGAGTGGACATCACATTGCTGCCACGGCATTGAGTTTACTAGGCCGTACCCGTGAAGCTCTCCTATTTATGTGTTCGTGA

>Glyma.06g071300.3 sequence-type=CDS polypeptide=Glyma.06g071300.3.p locus=Glyma.06g071300 id=Glyma.06g071300.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCTACTACTCCTTCATCTACATACCCATTCGGAACCCCTTTCCACTCGCACACTCGAAGACTTGATTGCTCAACCTCAACCTCCATGTTCCCCCTTCATTCAGACCTATCTACAATTTCTATGTGCCCGCGTTCTGCTTCAAAGGGATTAGTTGATCGAGTATATGCACAGCTTGATGGTGATGATTACCACAGGGAGAAAGTTCCAACACCCATTCTTGACATGGTTGAAAACCCTCTTTGCTTGAAGAACTTATCTCTTAAGGAACTGAAACAACTAGCAGTTGAAATCCGTTCAGATTTGTCTTCTATTATGTCAGGTACACAAATATCACCGAAAGCAAGTATGGCAGTGGTGGAGCTGACAGTTGCAATACATCATGTTTTCAATGCTCCAGTAGACAAGATATTGTGGGATGTTGGGGATCAAACATATGCACATAAAATTCTTACAGGAAGGCGATCACTCATGACGACAATGAGAAGAAAGAATGGTCTTTCTGGTTTTACTTCCCGATTTGAAAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCTGCTGGACTTGGCATGGCAGTTGCACGGGATATTAAGGGGAGGCAAGAACGCGTAGTTGCAGTTATCAGCAATTGGACAACTATGGCTGGTCAGGCGTATGAGGCAATGAGCAATGCAGGATATTTGGACTCAAATATGGTTGTGATTTTGAATGATAGCCGCCACTCTTTACTTCCAAAAATTGAGGAGGGGCCAAAGACATCTGTCAATGCCCTATCTAGTACCCTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGGCGATTTAGAGAAGCTGCTAAGGGTGTCACGAAACGAATTGGTAGAGGTATGCATGAGTTGGCAGCTAAAGTTGATGAGTATGCTCGTGGTATGATGGGTCCTCTAGGTTCTACTCTTTTTGAAGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGACACAATATTGAAGATCTCATATGTGTTCTGCAAGAAGTAGCTTCCCTGGATTCAATGGGACCTGTCTTGGTACATGTGATAACTGATGAAAATCAGGGAGATGATAACAGTCAGAAAAGTGATATGTCAGATGAGCAGAAAAATGAAGGTTTTGTTAAATCTGATTTGTTAGATAATCCTGTTTGGCCTCAAACATATGGCAATTGCTTTGTGGCGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTATTGTTGTTCATGCTGGATTAACGATGGAGCCATCACTTGAACTGTTTCAGGAAAAATTTCCGGATAGGTTTTTTGATGTGGGAATGGCTGAGCAACATGCAGTCACATTTGCTTCTGGTTTGGCATGTGGTGGCTTGAAGCCATTTTGTGTCATACCTTCGTCCTTTCTACAAAGAGCCTATGACCAGGTGGTACATGATGTTGATCAACAGAGAATTCCAGTGCGTTTTGTTATTACAAGTGCAGGATTGGTAGGTTCTGATGGTCCCCTTCGATGTGGAGCATTTGATATAAACTTTATGTCATGCTTACCAAACATGATTGTCATGGCCCCATCTGATGAGCTTGAACTCATGCACATGGTGGCTACTGCTACTCGTATCAATAATCAGCCTATCTGCTTTCGGTATCCAAGGGGTGCCCTGGTTGGGGAAGGCTACACTATAGGTGATGGAATCCCCATCAAGATAGGAAGAGGAAGAGTTCTTGTTGAAGGTAAAGATGTTGCTTTCCTAGGATATGGATCGATGGTTCAGAACTGCTTAAAGGCTCATTCACTCCTTGCAAAGCTTGGCATTGAGGTCACGGTTGCTGATGCAAGGTTCTGCAAGCCCCTTGACATTATGCTTCTGAGGCAGCTTTGTAAACACCACTCTTTTCTAGTTACTGTTGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGCTCAGTTTATTGCAGTTAATGGACTGCTCGATGGAAGAATTAAGTGGCGACCAATTGTTTTACCAGACAGATATATTGAGCATGCATCACCAAATGAACAGCTTGACCAAGCAGGGTTGAGTGGACATCACATTGCTGCCACGGCATTGAGTTTACTAGGCCGTACCCGTGAAGCTCTCCTATTTATGTGTTCGTGA

>Glyma.06g071300.4 sequence-type=CDS polypeptide=Glyma.06g071300.4.p locus=Glyma.06g071300 id=Glyma.06g071300.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCTACTACTCCTTCATCTACATACCCATTCGGAACCCCTTTCCACTCGCACACTCGAAGACTTGATTGCTCAACCTCAACCTCCATGTTCCCCCTTCATTCAGACCTATCTACAATTTCTATGTGCCCGCGTTCTGCTTCAAAGGGATTAGTTGATCGAGTATATGCACAGCTTGATGGTGATGATTACCACAGGGAGAAAGTTCCAACACCCATTCTTGACATGGTTGAAAACCCTCTTTGCTTGAAGAACTTATCTCTTAAGGAACTGAAACAACTAGCAGTTGAAATCCGTTCAGATTTGTCTTCTATTATGTCAGGTACACAAATATCACCGAAAGCAAGTATGGCAGTGGTGGAGCTGACAGTTGCAATACATCATGTTTTCAATGCTCCAGTAGACAAGATATTGTGGGATGTTGGGGATCAAACATATGCACATAAAATTCTTACAGGAAGGCGATCACTCATGACGACAATGAGAAGAAAGAATGGTCTTTCTGGTTTTACTTCCCGATTTGAAAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCTGCTGGACTTGGCATGGCAGTTGCACGGGATATTAAGGGGAGGCAAGAACGCGTAGTTGCAGTTATCAGCAATTGGACAACTATGGCTGGTCAGGCGTATGAGGCAATGAGCAATGCAGGATATTTGGACTCAAATATGGTTGTGATTTTGAATGATAGCCGCCACTCTTTACTTCCAAAAATTGAGGAGGGGCCAAAGACATCTGTCAATGCCCTATCTAGTACCCTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGGCGATTTAGAGAAGCTGCTAAGGGTGTCACGAAACGAATTGGTAGAGGTATGCATGAGTTGGCAGCTAAAGTTGATGAGTATGCTCGTGGTATGATGGGTCCTCTAGGTTCTACTCTTTTTGAAGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGACACAATATTGAAGATCTCATATGTGTTCTGCAAGAAGTAGCTTCCCTGGATTCAATGGGACCTGTCTTGGTACATGTGATAACTGATGAAAATCAGGGAGATGATAACAGTCAGAAAAGTGATATGTCAGATGAGCAGAAAAATGAAGGTTTTGTTAAATCTGATTTGTTAGATAATCCTGTTTGGCCTCAAACATATGGCAATTGCTTTGTGGCGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTATTGTTGTTCATGCTGGATTAACGATGGAGCCATCACTTGAACTGTTTCAGGAAAAATTTCCGGATAGGTTTTTTGATGTGGGAATGGCTGAGCAACATGCAGTCACATTTGCTTCTGGTTTGGCATGTGGTGGCTTGAAGCCATTTTGTGTCATACCTTCGTCCTTTCTACAAAGAGCCTATGACCAGGTGGTACATGATGTTGATCAACAGAGAATTCCAGTGCGTTTTGTTATTACAAGTGCAGGATTGGTAGGTTCTGATGGTCCCCTTCGATGTGGAGCATTTGATATAAACTTTATGTCATGCTTACCAAACATGATTGTCATGGCCCCATCTGATGAGCTTGAACTCATGCACATGGTGGCTACTGCTACTCGTATCAATAATCAGCCTATCTGCTTTCGGTATCCAAGGGGTGCCCTGGTTGGGGAAGGCTACACTATAGGTGATGGAATCCCCATCAAGATAGGAAGAGGAAGAGTTCTTGTTGAAGGTAAAGATGTTGCTTTCCTAGGATATGGATCGATGGTTCAGAACTGCTTAAAGGCTCATTCACTCCTTGCAAAGCTTGGCATTGAGGTCACGGTTGCTGATGCAAGGTTCTGCAAGCCCCTTGACATTATGCTTCTGAGGCAGCTTTGTAAACACCACTCTTTTCTAGTTACTGTTGAGGAAGGATCTATTGGAGGATTTGGTTCCCATGTTGCTCAGTTTATTGCAGTTAATGGACTGCTCGATGGAAGAATTAAGTGGCGACCAATTGTTTTACCAGACAGATATATTGAGCATGCATCACCAAATGAACAGCTTGACCAAGCAGGGTTGAGTGGACATCACATTGCTGCCACGGCATTGAGTTTACTAGGCCGTACCCGTGAAGCTCTCCTATTTATGTGTTCGTGA

>Glyma.06g071300.1.p sequence-type=predicted peptide transcript=Glyma.06g071300.1 locus=Glyma.06g071300 id=Glyma.06g071300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAATTPSSTYPFGTPFHSHTRRLDCSTSTSMFPLHSDLSTISMCPRSASKGLVDRVYAQLDGDDYHREKVPTPILDMVENPLCLKNLSLKELKQLAVEIRSDLSSIMSGTQISPKASMAVVELTVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDENQGDDNSQKSDMSDEQKNEGFVKSDLLDNPVWPQTYGNCFVATLVAEAEKDKDIIVVHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCVIPSSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLRCGAFDINFMSCLPNMIVMAPSDELELMHMVATATRINNQPICFRYPRGALVGEGYTIGDGIPIKIGRGRVLVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIMLLRQLCKHHSFLVTVEEGSIGGFGSHVAQFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALLFMCS*

>Glyma.06g071300.3.p sequence-type=predicted peptide transcript=Glyma.06g071300.3 locus=Glyma.06g071300 id=Glyma.06g071300.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAATTPSSTYPFGTPFHSHTRRLDCSTSTSMFPLHSDLSTISMCPRSASKGLVDRVYAQLDGDDYHREKVPTPILDMVENPLCLKNLSLKELKQLAVEIRSDLSSIMSGTQISPKASMAVVELTVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDENQGDDNSQKSDMSDEQKNEGFVKSDLLDNPVWPQTYGNCFVATLVAEAEKDKDIIVVHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCVIPSSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLRCGAFDINFMSCLPNMIVMAPSDELELMHMVATATRINNQPICFRYPRGALVGEGYTIGDGIPIKIGRGRVLVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIMLLRQLCKHHSFLVTVEEGSIGGFGSHVAQFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALLFMCS*

>Glyma.06g071300.4.p sequence-type=predicted peptide transcript=Glyma.06g071300.4 locus=Glyma.06g071300 id=Glyma.06g071300.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAATTPSSTYPFGTPFHSHTRRLDCSTSTSMFPLHSDLSTISMCPRSASKGLVDRVYAQLDGDDYHREKVPTPILDMVENPLCLKNLSLKELKQLAVEIRSDLSSIMSGTQISPKASMAVVELTVAIHHVFNAPVDKILWDVGDQTYAHKILTGRRSLMTTMRRKNGLSGFTSRFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELAAKVDEYARGMMGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDENQGDDNSQKSDMSDEQKNEGFVKSDLLDNPVWPQTYGNCFVATLVAEAEKDKDIIVVHAGLTMEPSLELFQEKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCVIPSSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLRCGAFDINFMSCLPNMIVMAPSDELELMHMVATATRINNQPICFRYPRGALVGEGYTIGDGIPIKIGRGRVLVEGKDVAFLGYGSMVQNCLKAHSLLAKLGIEVTVADARFCKPLDIMLLRQLCKHHSFLVTVEEGSIGGFGSHVAQFIAVNGLLDGRIKWRPIVLPDRYIEHASPNEQLDQAGLSGHHIAATALSLLGRTREALLFMCS*







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