SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.06g058200

Feature Type:gene_model
Chromosome:Gm06
Start:4355010
stop:4359782
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G26260.1AT 3BETAHSD/D2,AT3BETAHSD/D2 JGI N/AIEA
1.1.1.170EC 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase JGI N/AIEA
K07748KEGG Steroid biosynthesis JGI N/AIEA
KOG1430 KOG C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases JGI N/AIEA
PTHR10366PantherFam NAD DEPENDENT EPIMERASE/DEHYDRATASE JGI N/AIEA
PTHR10366:SF242PantherFam STEROL-4-ALPHA-CARBOXYLATE 3-DEHYDROGENASE, DECARBOXYLATING JGI N/AIEA
PF16363Pfam GDP-mannose 4,6 dehydratase JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma06g06080 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.06g058200.1 sequence-type=CDS polypeptide=Glyma.06g058200.1.p locus=Glyma.06g058200 id=Glyma.06g058200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGCAAAAGATAAGTGGTGCGTGGTGACCGGAGGTCGCGGCTTCGCTGCTCGGTCTTTGGTGGAAATGCTAATTCGTCACAAGGAGTACTGCGTTCGCATCGCCGATTTGGAAGTCAGCATTGTTCTCGAGCCCGCCGAGCAGTTAGGCCTTCTCGGCCAGGCCCTGCACTCTGGCCGAGCCCAATATGTCTCCCTCGATCTTCGCAACAAGGCCCAAGTTCTAAAAGCGTTGGAGGGAGTTGAGGTGGTGTTCCACATGGCTGCTCCAAACTCTTCCATTAACAACTACCAGCTTCATCATTCCGTCAATGTGCAAGGGACGAATAATGTCATCGATGCTTGCGTGGAGCTGAACGTGAAGCGTCTCGTTTACACTAGCTGTCTCGTTTACACCAGCTCTCCCAGCGTCTTCTTCGACGATGTTCATGGAATTCATAATGGAAACGAAACAATGCCTTATGCGCATTCGCCTAATGATCATTATTCAGCAACGAAAGCCGAGGCTGAGGCATTGGTTATTAAAGCTAATGGGACTAATGGGCTCCTAACGTGCTGCATACGCCCTAGCAGCATTTTTGGGCCTGGTGATAGGCTGTCGGTGCCTTCACTAGTTGATGCTGCCAGAAAAGGGGAATCTAAGTTTCTTATTGGTGATGGCAATAACGTTTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGATCGAGCTCTAGCTTCAGAAGGACCGGTTTCAGAAAAAGCTGCGGGAGAGGCATATTTCATAACAAATATGGAGCCTATGAAATTCTGGGAGTTCGTGTCATTGGTAGTGGAAGGTCTTGGATATGAAAGGCCAAGGATAAAGATCCCCACCTTTGTTATCATGCCCATTGCACATTTGGTGGAGTGGATATATAAGCTGCTAGGCCCATATGGGATGAAGCTGCCTCAGTTAATTCCTTCGAGAATAAGACTCATATCTTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGCACCCATCGTAACACTACAGGAGGGTCTGCGAAGGACAATTGAATCATACACACACTTGAAGGCGGATAATGAACCTAAAACTAAAAGAGAAGGTCCCTCAAAAGCTTCCAAATATCTTGGAAGTGGAAGAGGTGTGAATAATCAACTATATCTGTCTAACTTCTTTGCTTGGTGA

>Glyma.06g058200.2 sequence-type=CDS polypeptide=Glyma.06g058200.2.p locus=Glyma.06g058200 id=Glyma.06g058200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGCAAAAGATAAGTGGTGCGTGGTGACCGGAGGTCGCGGCTTCGCTGCTCGGTCTTTGGTGGAAATGCTAATTCGTCACAAGGAGTACTGCGTTCGCATCGCCGATTTGGAAGTCAGCATTGTTCTCGAGCCCGCCGAGCAGTTAGGCCTTCTCGGCCAGGCCCTGCACTCTGGCCGAGCCCAATATGTCTCCCTCGATCTTCGCAACAAGGCCCAAGTTCTAAAAGCGTTGGAGGGAGTTGAGGTGGTGTTCCACATGGCTGCTCCAAACTCTTCCATTAACAACTACCAGCTTCATCATTCCGTCAATGTGCAAGGGACGAATAATGTCATCGATGCTTGCGTGGAGCTGAACGTGAAGCGTCTCGTTTACACTAGCTGTCTCGTTTACACCAGCTCTCCCAGCGTCTTCTTCGACGATGTTCATGGAATTCATAATGGAAACGAAACAATGCCTTATGCGCATTCGCCTAATGATCATTATTCAGCAACGAAAGCCGAGGCTGAGGCATTGGTTATTAAAGCTAATGGGACTAATGGGCTCCTAACGTGCTGCATACGCCCTAGCAGCATTTTTGGGCCTGGTGATAGGCTGTCGGTGCCTTCACTAGTTGATGCTGCCAGAAAAGGGGAATCTAAGTTTCTTATTGGTGATGGCAATAACGTTTATGATTTCACATATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGATCGAGCTCTAGCTTCAGAAGGACCGGTTTCAGAAAAAGCTGCGGGAGAGGCATATTTCATAACAAATATGGAGCCTATGAAATTCTGGGAGTTCGTGTCATTGGTAGTGGAAGGTCTTGGATATGAAAGGCCAAGGATAAAGATCCCCACCTTTGTTATCATGCCCATTGCACATTTGGTGGAGTGGATATATAAGCTGCTAGGCCCATATGGGATGAAGCTGCCTCAGTTAATTCCTTCGAGAATAAGACTCATATCTTGCAGCAGAACTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGCACCCATCGTAACACTACAGGAGGGTCTGCGAAGGACAATTGAATCATACACACACTTGAAGGCGGATAATGAACCTAAAACTAAAAGAGAAGGTCCCTCAAAAGCTTCCAAATATCTTGGAAGTGGAAGAGGTGTGAATAATCAACTATATCTGTCTAACTTCTTTGCTTGGTGA

>Glyma.06g058200.1.p sequence-type=predicted peptide transcript=Glyma.06g058200.1 locus=Glyma.06g058200 id=Glyma.06g058200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEAKDKWCVVTGGRGFAARSLVEMLIRHKEYCVRIADLEVSIVLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQVLKALEGVEVVFHMAAPNSSINNYQLHHSVNVQGTNNVIDACVELNVKRLVYTSCLVYTSSPSVFFDDVHGIHNGNETMPYAHSPNDHYSATKAEAEALVIKANGTNGLLTCCIRPSSIFGPGDRLSVPSLVDAARKGESKFLIGDGNNVYDFTYVENVAHAHICADRALASEGPVSEKAAGEAYFITNMEPMKFWEFVSLVVEGLGYERPRIKIPTFVIMPIAHLVEWIYKLLGPYGMKLPQLIPSRIRLISCSRTFDCSKAKDRLGYAPIVTLQEGLRRTIESYTHLKADNEPKTKREGPSKASKYLGSGRGVNNQLYLSNFFAW*

>Glyma.06g058200.2.p sequence-type=predicted peptide transcript=Glyma.06g058200.2 locus=Glyma.06g058200 id=Glyma.06g058200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEAKDKWCVVTGGRGFAARSLVEMLIRHKEYCVRIADLEVSIVLEPAEQLGLLGQALHSGRAQYVSLDLRNKAQVLKALEGVEVVFHMAAPNSSINNYQLHHSVNVQGTNNVIDACVELNVKRLVYTSCLVYTSSPSVFFDDVHGIHNGNETMPYAHSPNDHYSATKAEAEALVIKANGTNGLLTCCIRPSSIFGPGDRLSVPSLVDAARKGESKFLIGDGNNVYDFTYVENVAHAHICADRALASEGPVSEKAAGEAYFITNMEPMKFWEFVSLVVEGLGYERPRIKIPTFVIMPIAHLVEWIYKLLGPYGMKLPQLIPSRIRLISCSRTFDCSKAKDRLGYAPIVTLQEGLRRTIESYTHLKADNEPKTKREGPSKASKYLGSGRGVNNQLYLSNFFAW*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo