SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g046400

Feature Type:gene_model
Chromosome:Gm06
Start:3502160
stop:3506053
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g046400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G27840.1AT ATCSA-1 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K10570KEGG DNA repair and recombination proteins JGI N/AIEA
KOG4283 KOG Transcription-coupled repair protein CSA, contains WD40 domain JGI N/AIEA
PTHR22850PantherFam WD40 REPEAT FAMILY JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA

Gene model name correspondences to Glyma.06g046400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g04930 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g046400
>Glyma.06g046400.1 sequence-type=CDS polypeptide=Glyma.06g046400.1.p locus=Glyma.06g046400 id=Glyma.06g046400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCACAAGCAAACGCATACGCATGTGTGGAAGCGGATCAGAGACAGGGAAGCTGGGAAACTGCATGCAAGCCATTTCGCCAACCGCATAAAATGGAATCGCATTTCGCAACTCCAATTATCCAATCACAAAGACATCGTCTCACCTCACAAAGGCGCCATCAACTCCCTTCAGATTGATTCCACGGAGGGAAGATATTTGCTATCCGCCGCCTCCGATGCCTCGGTAGCAGTCTACGACGTCCAACGACCCACCGTTTACGAAGCCGGCGGCGTCATTTCGAAACACAGCTCTATATTTGTCGTTGACAAGCAGCACCAGCAAGCCCATAAATATGCGGTTTCCTCAGCTATATGGTATCCCATTGACACCGGCTTGTTCGTCACTGGCTCATACGATCACCACATTAATGTTTGGGATACCAATACCACCCAGGTGGTGGTAAATTTCAAAATGCCTGGAAAGGTTCATAGGGCTGCAATGTCCAATTTATCAACATCTCACATGCTTATTGCTGCTGCCACTGAGGATGTCCAAGTTCGCCTTTGTGATATTGCTTCCGGAGCCTTTGCTCACACTTTGTCCGGTCACCGTGATGGAGTAATGACTGTTGAATGGTCTAATTCAAGTGAATGGGTCTTGGTTACTGGGGGATGTGATGGTGCAATACGATTTTGGGACATCAGACGCGCTGGCTGTTTCCAAGTTTTAGATCAATCTCGGACTCAGCTTGGAAGACGCCCAACCATACTCAATCACTCCATGATAACTAAGGATTCAAGTACAAAATTGAGTGCTGCGCAGAAGAAACATGCTAATGGAAGTGGTAGCAGACAACAACTAATTGGCAGAGTTCCATCCAAGGGACCAATGAAGCAGAAATTACATCCAGGAATGTTGTCTACTCAGGATCGTGCGACTGCTCATTATGGTGCTGTGACAGGGTTAAAAGCCACAGAGGATGGCATGTATCTACTAAGTGCAGGGTCTGATTCAAGATTGAGGTTGTGGGATGTTGAATCTGGCTGTGACACACTTGTGAACTTCGAAACAGTTCGCCTGCAAGTAAACAAACCTCTTCAACTAGCCACCACTCAAGATTCAACCCTTGTTTTTGTTCCATGCATGAGATCTGTGAAAGCATTTGACATGTGGTCTGGGAACACATACACGATATTACGTGGTCACTATGAATGTGTGAACTCTTGCTGGTTTAATCAACAAGATCAGGAACTGTACACTGGTGGAAATGATAGACAAATTCTTGTCTGGTCACCTGCTAGGTCAATGGCTGATGAAATGGACGAAGGACCTGCTGAGGATCAGGATAACTGGAGTAGCTGA
Predicted protein sequences of Glyma.06g046400
>Glyma.06g046400.1.p sequence-type=predicted peptide transcript=Glyma.06g046400.1 locus=Glyma.06g046400 id=Glyma.06g046400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHKQTHTHVWKRIRDREAGKLHASHFANRIKWNRISQLQLSNHKDIVSPHKGAINSLQIDSTEGRYLLSAASDASVAVYDVQRPTVYEAGGVISKHSSIFVVDKQHQQAHKYAVSSAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRAAMSNLSTSHMLIAAATEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSRTQLGRRPTILNHSMITKDSSTKLSAAQKKHANGSGSRQQLIGRVPSKGPMKQKLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESGCDTLVNFETVRLQVNKPLQLATTQDSTLVFVPCMRSVKAFDMWSGNTYTILRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPARSMADEMDEGPAEDQDNWSS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo