Report for Sequence Feature Glyma.06g027300
| Feature Type: | gene_model |
| Chromosome: | Gm06 |
| Start: | 2101558 |
| stop: | 2102987 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.06g027300
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT2G39840.1 | AT |
TOPP4 |
JGI | N/A | IEA |
| 3.1.3.16 | EC |
protein-serine/threonine phosphatase |
JGI | N/A | IEA |
| GO:0016787 | GO-mf |
hydrolase activity |
JGI | N/A | IEA |
| K06269 | KEGG |
Spliceosome |
JGI | N/A | IEA |
| KOG0374 |
KOG |
Serine/threonine specific protein phosphatase PP1, catalytic subunit |
JGI | N/A | IEA |
| PTHR11668 | PantherFam |
SERINE/THREONINE PROTEIN PHOSPHATASE |
JGI | N/A | IEA |
| PF00149 | Pfam |
Calcineurin-like phosphoesterase |
JGI | N/A | IEA |
| PF16891 | Pfam |
Serine-threonine protein phosphatase N-terminal domain |
JGI | N/A | IEA |
Proteins Associated with Glyma.06g027300
| Locus | Gene Symbol | Protein Name |
|---|
| | TOPP6 | TOPP-type protein phosphatase gene 6 |
Gene model name correspondences to Glyma.06g027300 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma06g03000 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.06g027300
>Glyma.06g027300.1 sequence-type=CDS polypeptide=Glyma.06g027300.1.p locus=Glyma.06g027300 id=Glyma.06g027300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGGATTGGATGGTTTGATAGAGAGGCTTTTGGAAGTAAGGAAGAACAGAGGCAAACAAATTCAACTGGTAGAGTCAGAAATTCGCAGCCTTTGCAGCACGGCAAAAGATCTCTTCCTCAGGCAGCCAAACCTGTTGGAATTGGAAGCTCCCATTAACGTTTGTGGTGATATACACGGGCAATATCCAGACCTGTTGCGAGTGTTGGAGTACGGTGGGTTTCCGCCGGATTCGAATTACCTATTCCTTGGAGACTACGTGGACAGAGGAAAACAGAGCGTGGAAACAATATGCCTGCTGCTCGCCTACAAGATAAAATACCCAGAAAACTTTTTCCTTCTCCGAGGAAACCACGAGTGTGCCTCTATTAACAGAATCTACGGGTTTTACGACGAGTGCAAGCGCAGATTCAGCGTCCGTCTCTGGAAGATATTCACAGATTGCTTCAACTGTTTGCCCGTGGCCGCAGTGATCGATGACAAAATCCTCTGCATGCACGGCGGGCTTTCCCCGGACATGGAGAGCCTGAATCAGATCAAAGCCATAGAGAGGCCCGTGGACGTGCCCGACCAGGGCCTCTTATGCGACCTCCTCTGGGCCGATCCCGACAACGAAATCAGTGGCTGGGGCGAGAATGATAGGGGCGTCTCCTACACTTTCGGCCCCGATAAGGTCTCCGAGTTCTTGAAGAAACACGATCTCGATCTCATTTGCAGGGCCCACCAGGTCGTCGAAGATGGCTACCAATTCTTCGCTGACAGGCAGCTCGTTACCATCTTCTCTGCCCCAAACTATTGCGGAGAGTTCAACAATGCCGGTGCCCTCATGTGCGTCGACCAAACTTTACTCTGTTCCTTTCAGATTGTCAAACCCTTTGGCACCTTTAGAGGAAAACTCACTTCTTAA
Predicted protein sequences of Glyma.06g027300
>Glyma.06g027300.1.p sequence-type=predicted peptide transcript=Glyma.06g027300.1 locus=Glyma.06g027300 id=Glyma.06g027300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEGLDGLIERLLEVRKNRGKQIQLVESEIRSLCSTAKDLFLRQPNLLELEAPINVCGDIHGQYPDLLRVLEYGGFPPDSNYLFLGDYVDRGKQSVETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPDMESLNQIKAIERPVDVPDQGLLCDLLWADPDNEISGWGENDRGVSYTFGPDKVSEFLKKHDLDLICRAHQVVEDGYQFFADRQLVTIFSAPNYCGEFNNAGALMCVDQTLLCSFQIVKPFGTFRGKLTS*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
