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Report for Sequence Feature Glyma.06g027200

Feature Type:gene_model
Chromosome:Gm06
Start:2094212
stop:2098164
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g027200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G54340.1AT AP3,ATAP3 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
K09264KEGG Transcription factors JGI N/AIEA
KOG0014 KOG MADS box transcription factor JGI N/AIEA
PTHR11945PantherFam MADS BOX PROTEIN JGI N/AIEA
PTHR11945:SF219PantherFam MADS-BOX TRANSCRIPTION FACTOR 16 JGI N/AIEA
PF00319Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) JGI N/AIEA
PF01486Pfam K-box region JGI N/AIEA

Proteins Associated with Glyma.06g027200
LocusGene SymbolProtein Name
NMH7 MADS-box protein NMH7
AP3b Apetala 3 gene b

Gene model name correspondences to Glyma.06g027200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g02990 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g027200
>Glyma.06g027200.1 sequence-type=CDS polypeptide=Glyma.06g027200.1.p locus=Glyma.06g027200 id=Glyma.06g027200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCGAGGAAAGATCCAGATCAAGAGGATAGAGAACACCACCAACCGCCAGGTCACTTATTCTAAACGACGGAATGGCCTTTTCAAGAAGGCCAACGAGCTCACCGTTCTATGCGATGCCAAGGTTTCTATTATTATGTTCTCCAGCACTGGGAAACTCCACGAGTACATCAGCCCCTCCACCTCAACAAAGCAGTTCTTCGATCAGTACCAGATGACTCTAGGAGTCGATCTCTGGAACTCTCATTACGAGAATATGCAAGAGAACTTGAAGAAACTCAAAGATGTGAATAGGAATCTTCGTAAGGAGATTAGGCAGAGGATGGGAGATTGTCTGAACGATCTGGGCATGGAAGATCTCAAGCTCCTTGAGGAAGAAATGGACAAGGCCGCCAAGGTTGTTCGTGAACGTAAGTATAAGGTGATAACAAATCAGATTGACACCCAAAGGAAAAAGTTTAATAACGAGAAAGAAGTGCACAACAGACTCCTGCGTGACTTGGATGCAAGAGCAGAAGATCCACGTTTTGCATTGATAGATAATGGAGGGGAGTACGAGTCTGTGATCGGATTCTCAAATTTAGGTCCACGCATGTTCGCATTGAGCCTACAGCCAAGCCATCCTAGTGCCCAAAGCGGAGCAGCAGGCTCTGATCTTACCACTTACCCTTTACTTTTCTAG
Predicted protein sequences of Glyma.06g027200
>Glyma.06g027200.1.p sequence-type=predicted peptide transcript=Glyma.06g027200.1 locus=Glyma.06g027200 id=Glyma.06g027200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MARGKIQIKRIENTTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMFSSTGKLHEYISPSTSTKQFFDQYQMTLGVDLWNSHYENMQENLKKLKDVNRNLRKEIRQRMGDCLNDLGMEDLKLLEEEMDKAAKVVRERKYKVITNQIDTQRKKFNNEKEVHNRLLRDLDARAEDPRFALIDNGGEYESVIGFSNLGPRMFALSLQPSHPSAQSGAAGSDLTTYPLLF*






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