SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g025000

Feature Type:gene_model
Chromosome:Gm06
Start:1860075
stop:1863058
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g025000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G42560.1AT JGI N/AIEA
K17338KEGG Structural proteins JGI N/AIEA
KOG1726 KOG HVA22/DP1 gene product-related proteins JGI N/AIEA
PTHR12300PantherFam HVA22-LIKE PROTEINS JGI N/AIEA
PF03134Pfam TB2/DP1, HVA22 family JGI N/AIEA

Gene model name correspondences to Glyma.06g025000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g02750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g025000
>Glyma.06g025000.2 sequence-type=CDS polypeptide=Glyma.06g025000.2.p locus=Glyma.06g025000 id=Glyma.06g025000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATAGGATCTTTTATTACCAGGGCACTTGTGATGGTTTTTGGTTATGCCTTCCCAGCCTATGAATGCTATAAAGCAGTTGAAAAGAATAGGCCAGAAATTGAACAACTTCGCTTTTGGTGCCAGTACTGGATTTTGGTAGCTGTTTTGTCAGTATGTGAGCGGATTGCTGATGCTTTCATATCATGGGTCCCAATGTATAGTGAAGCTAAGTTGGCATTTGTCATATACTTGTGGTACCCAAAAACAAAGGGAACAACATATGTGTATGATTCCTTCTTTAGACCATATGTTGCAAAACATGAGACAGAAATTGATCGCAACTTGTTGGAACTAAGGACAAGAGCAGGAGATATTGCAGTTTTGTATTGGCAAAAAGCTGCTAGTTATGGCCAGACTAGAATATTTGAAATTTTGCAGTACGTTGCTGCACAATCAACACCTTCACCACGCCCTGCTCAGCAACAACCAGCTGTGAGGGTGCGTCAACCCGCATCTAGTAATAGCCAACCAGCAGCTGCAACAGAACCACAAGCTGAGAATCCATCTTCTCCTACTTCTAGCTCATCCAGTCAGCACCAGAAGGAAGTAGCAGAGAAGTTGGGTTCTTCACAGGTGCCTAAAGCACCCTACACTGTTGCAGGTTTAAGTAGCCAGAAGTCTAATCCTATACCTGCAGAGGATGAGCCAATGCAGATTGAAGCAGCACCACCTTCATCCTCTTCTGCAAATGAAAATGAGAATCCTCCCTTGGAAGATACAATAATGGAAGAAAGCATTAGAGTTACGCGAGGTAGACTAAGAAAAAATCGATCAGCTGGAATCCGTTAG
Predicted protein sequences of Glyma.06g025000
>Glyma.06g025000.2.p sequence-type=predicted peptide transcript=Glyma.06g025000.2 locus=Glyma.06g025000 id=Glyma.06g025000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MIGSFITRALVMVFGYAFPAYECYKAVEKNRPEIEQLRFWCQYWILVAVLSVCERIADAFISWVPMYSEAKLAFVIYLWYPKTKGTTYVYDSFFRPYVAKHETEIDRNLLELRTRAGDIAVLYWQKAASYGQTRIFEILQYVAAQSTPSPRPAQQQPAVRVRQPASSNSQPAAATEPQAENPSSPTSSSSSQHQKEVAEKLGSSQVPKAPYTVAGLSSQKSNPIPAEDEPMQIEAAPPSSSSANENENPPLEDTIMEESIRVTRGRLRKNRSAGIR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo