SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g020400

Feature Type:gene_model
Chromosome:Gm06
Start:1534367
stop:1535271
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g020400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G76100.1AT PETE1 JGI N/AIEA
GO:0005507GO-mf copper ion binding JGI N/AIEA
GO:0009055GO-mf electron transfer activity JGI N/AIEA
K02638KEGG Photosynthesis proteins JGI N/AIEA
PTHR34192PantherFam PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED JGI N/AIEA
PF00127Pfam Copper binding proteins, plastocyanin/azurin family JGI N/AIEA

Gene model name correspondences to Glyma.06g020400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g02300 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g020400
>Glyma.06g020400.1 sequence-type=CDS polypeptide=Glyma.06g020400.1.p locus=Glyma.06g020400 id=Glyma.06g020400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCACCGTCACTTCTGCAGCAGTTTCTATTCCCTCATTCACTGGCCTCAAGGCAAGCGCAGGCAAAGTGAGTGCCGCCGCAGTTAAAGTCTCAGCTCCCCAAGCCACAAGGTTCTGCGGCATCAAGGCTTCCCTCAAAGACGTTGGAGTCGCTGTTGTGGCCACTGCTGCGAGCGCAGTTCTAGCTAGCAACGCCATGGCCATTGAAGTGTTACTGGGCACTGATGACGGGTCTCTGGTTTTCTCTCCCAACTCTTTCTCCGTGGCCCCTGGGGAAAAGATCGTGTTCAAGAACAACGCAGGTTTCCCCCACAACGTTGTGTTCGACGAGGACGAGATTCCTAGCGGCGTGGATGCAGGGAAAATCTCCATGAGCGAAGAAGACCTTCTCAATGCGGCTGGTGAGACTTACAGCGTTACTTTGGATGCCAAGGGAACCTACAGTTTCTACTGTTCGCCTCACCAAGGAGCTGGTATGGTGGGAAAAGTCACCGTTAATTAA
Predicted protein sequences of Glyma.06g020400
>Glyma.06g020400.1.p sequence-type=predicted peptide transcript=Glyma.06g020400.1 locus=Glyma.06g020400 id=Glyma.06g020400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MATVTSAAVSIPSFTGLKASAGKVSAAAVKVSAPQATRFCGIKASLKDVGVAVVATAASAVLASNAMAIEVLLGTDDGSLVFSPNSFSVAPGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMSEEDLLNAAGETYSVTLDAKGTYSFYCSPHQGAGMVGKVTVN*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo