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Report for Sequence Feature Glyma.06g020300

Feature Type:gene_model
Chromosome:Gm06
Start:1528688
stop:1530976
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g020300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11880.1AT JGI N/AIEA
4.1.1.17EC ornithine decarboxylase JGI N/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
K01581KEGG Glutathione metabolism JGI N/AIEA
KOG0622 KOG Ornithine decarboxylase JGI N/AIEA
PTHR11482PantherFam ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE JGI N/AIEA
PTHR11482:SF6PantherFam ORNITHINE DECARBOXYLASE 1-RELATED JGI N/AIEA
PF00278Pfam Pyridoxal-dependent decarboxylase, C-terminal sheet domain JGI N/AIEA
PF02784Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain JGI N/AIEA

Proteins Associated with Glyma.06g020300
LocusGene SymbolProtein Name
ODC2 ornithine decarboxylase

Gene model name correspondences to Glyma.06g020300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g02290 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g020300
>Glyma.06g020300.1 sequence-type=CDS polypeptide=Glyma.06g020300.1.p locus=Glyma.06g020300 id=Glyma.06g020300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCTTCACTAGTTGCGGAGGCATTCGAAGCCAAGGGCGCAGAACCCTTGAGCCTGAAGCCCATTTTCAGTGCCTCAGGCGTCAAGGGCAAGCGAGTAACTGCACTATCAGCAGAAGCAAATGCCCTCACTGATTTCATTCAAGCAATCATAGCTGACAAACCAGACATCGACTCTCCATTCAGCGTCCTCGATTTGGGCGTCGTAATGGGCCTCATGGACAAATGGGCCTGCAAGCTCCCCACGGTCCAGCCCTTCTACGCCGTCAAGTGCAACCCAAACCTCTCCCTCATCGGCGCGCTCGCTGCACTCGGCTCCAGCTTCGACTGCGCCAGCAAAGCCGAGATCGAATCTGTCTTGTCCCTCGGAGTCTCACCGGACAGAATCATCTACGCAAACCCATGCAAATCCGAGTCCCACATCAGATACGCCGCCTCCGTAGGTGTCAACGTCACAACCTACGACTCCCTCGACGAGGTCGAGAAAATCCGCAATTGCCACCCCACGTGCGAGTTGCTCCTCCGCATTAAACCCCCGCAAGACAGTGGAGCGCGTACCAGCTTGGGCCTCAAATACGGCGCGCTTCCCGAGGAGGTCCATGAGCTTCTCCAAGCTGCTCACGAGGCGGGGCTCAAGGTAACAGGCGTGTCCTTCCACATTGGTAGCGGCGGAGCCGACACGCGAGCCTACGACGGAGCCATATCCGCCGCTAAAAACGTATTCGAAATGGCTTCTGGGCTCGGCTTGCCCAGAATGCGCGTTCTGGACATCGGAGGCGGCTTCACCTCTGGGCCGCCGTTTGAAGCCGCGGCATTGAAAATAAACGCTGCGATTCAGGCCAGCTTCGGGAACGAGGAAGGGCTCGTGGTTATTGGCGAACCGGGTCGTTACTTCGCTGAAACGGCTTTCACGTTGGCGACGAGAATTATTGGGAAGCGCGTGAGGGGGGACGTGAGGGAGTACTGGATTGACGATGGGATTTACGGAACGCTTAATAACATAGTGTTTGATTACGCTACCGTCACGTGCATGCCACTGGCGTGCACCTCGAAACCGGAGAATCCTAGATGCAGCAGGGAATTGAATTTGAAGACTTACCCTAGCACCGTGTTTGGACCCACGTGCGATTCTATTGATACGGTTCTGAGGGATTACAAGCTGCCGGGACTGCAAGTGAACGATTGGCTAGTGTTCCCGAACATGGGTGCATATACGACGTCGTCGGGGACTAACTTCAATGGGTTTAGCTCCTCAGCCAAGTCCACGTTCCTTGCATATTCCAGCCCGGAACACAGCATGTTCTAA
Predicted protein sequences of Glyma.06g020300
>Glyma.06g020300.1.p sequence-type=predicted peptide transcript=Glyma.06g020300.1 locus=Glyma.06g020300 id=Glyma.06g020300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSLVAEAFEAKGAEPLSLKPIFSASGVKGKRVTALSAEANALTDFIQAIIADKPDIDSPFSVLDLGVVMGLMDKWACKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKAEIESVLSLGVSPDRIIYANPCKSESHIRYAASVGVNVTTYDSLDEVEKIRNCHPTCELLLRIKPPQDSGARTSLGLKYGALPEEVHELLQAAHEAGLKVTGVSFHIGSGGADTRAYDGAISAAKNVFEMASGLGLPRMRVLDIGGGFTSGPPFEAAALKINAAIQASFGNEEGLVVIGEPGRYFAETAFTLATRIIGKRVRGDVREYWIDDGIYGTLNNIVFDYATVTCMPLACTSKPENPRCSRELNLKTYPSTVFGPTCDSIDTVLRDYKLPGLQVNDWLVFPNMGAYTTSSGTNFNGFSSSAKSTFLAYSSPEHSMF*






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