SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g009400

Feature Type:gene_model
Chromosome:Gm06
Start:730805
stop:735026
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g009400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G39100.1AT SHL1 JGI N/AIEA
GO:0003682GO-mf chromatin binding JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR12505PantherFam PHD FINGER TRANSCRIPTION FACTOR JGI N/AIEA
PTHR12505:SF25PantherFam BAH DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF00628Pfam PHD-finger JGI N/AIEA
PF01426Pfam BAH domain JGI N/AIEA

Gene model name correspondences to Glyma.06g009400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g01180 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g009400
>Glyma.06g009400.1 sequence-type=CDS polypeptide=Glyma.06g009400.1.p locus=Glyma.06g009400 id=Glyma.06g009400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTAAACCGAAGGCTCCAAGACGAACCCTAGAGTCATACTCAGTCAAACACATAAGCAAAACCATTAGAGCTGGCGATTGCATCCTCATGCGGCCCTCCGATCCGTCGAAACCGTCGTACGTAGCGAGGATCGAGCGGATCGAAGCCGACGCGCGCGGCGCAAACGTGAAGATTCACGTGCGCTGGTACTACCGGCCGGAGGAATCAATCGGCGGTCGACGCCAGTTTCACGGCTCCAAGGAGGTTTTCCTCTCCGATCACTTCGATGTTCAGAGTGCCGACACAATCGAAGCCAAGTGTACGGTCCACAGCTTCAAGAGCTACACGAAGCTCGATGCTGTCGGAAACGACGATTTCTTCTGTCGTTTTGAGTACAATTCCTCCACCGGCGCCTTCAATCCTGATAGAGTTGCCGTGTATTGTAAATGTGAGATGCCTTACAACCCTGATGACCTAATGGTGCAATGCGAGGGCTGCACTGACTGGTTCCATCCTGCTTGTATAGACATGACTGTGGAAGAAGCCAAAAGACTTGACCACTTCTTTTGTGAAAGTTGCTCTGCTGAAGGTCAAAAAAAGTTGCAAAACTCTCATTCTGCTTCTAGACACTCAGATACAAAGGTGGATACTAAACGCCGTCGTAGGTAA

>Glyma.06g009400.4 sequence-type=CDS polypeptide=Glyma.06g009400.4.p locus=Glyma.06g009400 id=Glyma.06g009400.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTAAACCGAAGGCTCCAAGACGAACCCTAGAGTCATACTCAGTCAAACACATAAGCAAAACCATTAGAGCTGGCGATTGCATCCTCATGCGGCCCTCCGATCCGTCGAAACCGTCGTACGTAGCGAGGATCGAGCGGATCGAAGCCGACGCGCGCGGCGCAAACGTGAAGATTCACGTGCGCTGGTACTACCGGCCGGAGGAATCAATCGGCGGTCGACGCCAGTTTCACGGCTCCAAGGAGGTTTTCCTCTCCGATCACTTCGATGTTCAGAGTGCCGACACAATCGAAGCCAAGTGTACGGTCCACAGCTTCAAGAGCTACACGAAGCTCGATGCTGTCGGAAACGACGATTTCTTCTGTCGTTTTGAGTACAATTCCTCCACCGGCGCCTTCAATCCTGATAGAGTTGCCGTGTATTGTAAATGTGAGATGCCTTACAACCCTGATGACCTAATGGTGCAATGCGAGGGCTGCACTGACTGGTTCCATCCTGCTTGTATAGACATGACTGTGGAAGAAGCCAAAAGACTTGACCACTTCTTTTGTGAAAGTTGCTCTGCTGAAGAATTTAATACCATTTGA
Predicted protein sequences of Glyma.06g009400
>Glyma.06g009400.1.p sequence-type=predicted peptide transcript=Glyma.06g009400.1 locus=Glyma.06g009400 id=Glyma.06g009400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKPKAPRRTLESYSVKHISKTIRAGDCILMRPSDPSKPSYVARIERIEADARGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEAKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCTDWFHPACIDMTVEEAKRLDHFFCESCSAEGQKKLQNSHSASRHSDTKVDTKRRRR*

>Glyma.06g009400.4.p sequence-type=predicted peptide transcript=Glyma.06g009400.4 locus=Glyma.06g009400 id=Glyma.06g009400.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKPKAPRRTLESYSVKHISKTIRAGDCILMRPSDPSKPSYVARIERIEADARGANVKIHVRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEAKCTVHSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCTDWFHPACIDMTVEEAKRLDHFFCESCSAEEFNTI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo