SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06g005800

Feature Type:gene_model
Chromosome:Gm06
Start:460628
stop:463336
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06g005800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G02210.1AT COBL1 JGI N/AIEA
GO:0010215GO-bp cellulose microfibril organization JGI N/AIEA
GO:0016049GO-bp cell growth JGI N/AIEA
GO:0031225GO-cc anchored component of membrane JGI N/AIEA
PTHR31673PantherFam PROTEIN COBRA JGI N/AIEA
PTHR31673:SF9PantherFam COBRA-LIKE PROTEIN 6 JGI N/AIEA
PF04833Pfam COBRA-like protein JGI N/AIEA

Proteins Associated with Glyma.06g005800
LocusGene SymbolProtein Name
COBL7 Regulates cell wall expansion and cellulose depostion

Gene model name correspondences to Glyma.06g005800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma06g00810 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06g005800
>Glyma.06g005800.1 sequence-type=CDS polypeptide=Glyma.06g005800.1.p locus=Glyma.06g005800 id=Glyma.06g005800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTCTGAATGTTCATCGCGTATATTCTCCTACGCTGAATTCGATAATACTCTTACTTGCTCTCTGCACTTTATCAGATTGCTATGACCCGTTGGATCCTAATGGAAACATTTCCGTAACTTTTGACATCCTCGAACGTACTACAGATAATGGATATCTGGCAAGGGTGACCCTTGAAAACTACTATCAATATCGGCATGTAGAGAAACCCGGGTGGAAACTAGGATGGACGTGGGCTAACAATGAAGTGATATGGTCAATGAGTGGTGCCATAGCAACTGATAGAGGGAATTGTTCATCTTACAGTGGTTCTCAGATGCCACATTCATGCAAGAAAGATCCCACCATAGTTGATCTCTCTCTAGATGTCTCGCAAAACAGGTCAGAGCATTGTTGCCGTGGTGGTCTCCTCTCTGCCTGGTCTATTGATCCTTTCAATGCCTTCTCTTCATTTGAACTTGAAGTTCGCAACGTGGGAGATAACAACCCACTTGGACAAGCTCCTAATAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGCCCCCTTCTTGACACTGATCTCTCTGTCTCCTCAGATTTTGGGGGACTAAGACAAGTTCCTGTTCTCAGAACTTGGAAGTCAACATGTGCATACTCCAGTTTCATAGCAAACACAATACCGGTATGCTGTGTTTCCCTCTCATCATTTTACAACCCTGCCATCACATCTTGCCGTAATTGCAGTTGTGGATGCAGAGAAGCAGATAAAAGTACAGCATCTTGCATAAGGCCTAGTTCCTTGCCACGGTCTAATGGAGACAACACAATTGATGAAATAATAGAATGCACCGACCACATGTGCCCAGTTCGAGTCCATTGGCATTTCAAGAACAACTATATGAACCAATGGAGGGTGAAGCTTACAGTTTCTAACTACAATTACAACAGAAACTACTCAAACTGGAACGTGCTGGTTCAACATCCTGGTTTCACCCAAAAAGCAAGAACTTACAGCTTCAACAGCACTAGACTTCCTACCCTTGGGCTCCAAGATGGAGTTTCCCTTTTTTGGGGGATAGACTATTACAACAATGAGCTAGTGCATTCTGATAAGGGTGTTGTGGGTCTTGTGACAACAGAAATACTATTGGATAAAGATCCAAATTCTTTCACAGTAAGTAATGGATGGGCATTTCCGAGAAGAATATATTTCAATGGGGAGAACTGCGAAATGCCTTTACCTGACACGTTTCCAATGTTACCCAATGGTAGCTCCAGTTTAAGAGCTACTTACTGTGGTTTCAGTCTTTTATTTATCCTCTTGTTTCTTGCCCTACTACTCCTTTAA
Predicted protein sequences of Glyma.06g005800
>Glyma.06g005800.1.p sequence-type=predicted peptide transcript=Glyma.06g005800.1 locus=Glyma.06g005800 id=Glyma.06g005800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVLNVHRVYSPTLNSIILLLALCTLSDCYDPLDPNGNISVTFDILERTTDNGYLARVTLENYYQYRHVEKPGWKLGWTWANNEVIWSMSGAIATDRGNCSSYSGSQMPHSCKKDPTIVDLSLDVSQNRSEHCCRGGLLSAWSIDPFNAFSSFELEVRNVGDNNPLGQAPNNLTLMAPGPGYTCSPLLDTDLSVSSDFGGLRQVPVLRTWKSTCAYSSFIANTIPVCCVSLSSFYNPAITSCRNCSCGCREADKSTASCIRPSSLPRSNGDNTIDEIIECTDHMCPVRVHWHFKNNYMNQWRVKLTVSNYNYNRNYSNWNVLVQHPGFTQKARTYSFNSTRLPTLGLQDGVSLFWGIDYYNNELVHSDKGVVGLVTTEILLDKDPNSFTVSNGWAFPRRIYFNGENCEMPLPDTFPMLPNGSSSLRATYCGFSLLFILLFLALLLL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo